F363346

General Info

Members Datasets Scaffolds Average Seq Length
252 194 234 252

Family's Representative Sequence

Representative Sequence 3300031727|Ga0316576_10168445|Ga0316576_101684452
Length 289
Sequence MAPSRDIRVVTIGHRNTSVRLSTDRRCTPHWRPPVLDDRLDGMRNLFITGGSRGIGAATARMAAADGWNIFLTYANRRDDADAVAADCRLEGVDAECFQLDVSSEQSVTATFRRFDERAGALHCLVNNAGMLEQQSRLDAFTAERLERVFATNVIGAFLCAREAVRRMSTRHGGSGGSIVNVSSAASRLGSPNEYIDYAASKGAIDTMTIGLAREVATEGIRVNAVRPGLIETEIHASGGDPGRVARLAPGTPMGRGGTADEVAGAILYLASEAASYVTGSFIEVSGGR

Samples

Sample ID Description Type Environment
1 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
2 2582581298 Rhizobium alamii YR540 Isolate Rhizosphere
3 2582581299 Rhizobium leguminosarum OV483 Isolate Rhizosphere
4 2585427529 Rhizobium alamii YR584 Isolate Rhizosphere
5 2609459761 Enterobacter sp. NFR05 Isolate Rhizoplane
6 2643221570 Acidovorax sp. Root568 Isolate Unclassified
7 2643221596 Acidovorax sp. Root70 Isolate Unclassified
8 2643221599 Rhizobium sp. Root708 Isolate Unclassified
9 2643221609 Acidovorax sp. Root217 Isolate Unclassified
10 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
11 2643221734 Bosea sp. Root670 Isolate Unclassified
12 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
13 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
14 2932422444 Comamonas sp. 4034 Isolate Rhizosphere
15 2945874760 Phytobacter diazotrophicus UAEU22 Isolate Rhizosphere
16 2970524798 Mesorhizobium sp. M5C.F.Ca.ET.164.01.1.1 Isolate Nodule
17 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere
18 3005445848 Rhizobium sp. WYJ-E13 Isolate Unclassified
19 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
20 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
21 3300003347 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM Metagenome Rhizosphere
22 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
23 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
24 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
25 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
26 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
27 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
28 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
29 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
30 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
31 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
32 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
33 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
34 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
35 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
36 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
37 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
38 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
39 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
40 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
41 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
42 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
43 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
44 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
45 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
46 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
47 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
48 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
49 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
50 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
51 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
52 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
53 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
54 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
55 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
56 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
57 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
59 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
60 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
61 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
62 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
63 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
64 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
65 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
66 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
67 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
68 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
69 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
70 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
71 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
72 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
73 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
74 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
75 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
76 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
77 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
78 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
79 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
80 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
81 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
83 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
84 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
85 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
122 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
123 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
124 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
128 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
129 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
130 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
131 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
132 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
133 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
134 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
135 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
136 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
137 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
138 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
139 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
140 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
141 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
142 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
143 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
144 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
145 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
146 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
147 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
148 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
149 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
150 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
151 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
152 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
153 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
154 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
155 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
156 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
157 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
158 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
159 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
160 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
161 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
162 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
163 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
164 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
165 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
166 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
167 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
168 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
169 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
170 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
171 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
172 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
173 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
174 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
175 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
176 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
177 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
178 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
179 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
180 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
181 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
182 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
183 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
184 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
185 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
186 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
187 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
188 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
189 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
190 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
191 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
192 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
193 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
194 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.86
Metatranscriptomes 0
Isolates 7.14

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.32
Nodule 1.59
Rhizoplane 0.4
Rhizosphere 75.4
Stem 0
Stem Tuber 0
Unclassified 12.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25153J46596_10002338 3300003215 Bacteria 11000
2 rootH1_10203932 3300003323 Bacteria 1105
3 JGI26128J50194_1001710 3300003347 Bacteria 1411
4 Ga0055526_1001344 3300003771 Bacteria 17606
5 Ga0055524_1000104 3300003775 Bacteria 104549
6 Ga0070676_10048845 3300005328 Bacteria 2475
7 Ga0070670_100002787 3300005331 Bacteria 14455
8 Ga0070670_100073215 3300005331 Bacteria 2943
9 Ga0070677_10003177 3300005333 Bacteria 5285
10 Ga0070660_100369732 3300005339 Bacteria 1183
11 Ga0070689_100241981 3300005340 Bacteria 1486
12 Ga0070691_10007604 3300005341 Bacteria 4967
13 Ga0070668_100106409 3300005347 Bacteria 2228
14 Ga0070669_100006934 3300005353 Bacteria 8142
15 Ga0070669_100011302 3300005353 Bacteria 6339
16 Ga0070675_100006913 3300005354 Bacteria 8713
17 Ga0070671_100071999 3300005355 Bacteria 2886
18 Ga0070674_100001905 3300005356 Bacteria 11342
19 Ga0070674_100008298 3300005356 Bacteria 6179
20 Ga0070673_100074415 3300005364 Bacteria 2737
21 Ga0070667_100028811 3300005367 Bacteria 4623
22 Ga0070678_100014343 3300005456 Bacteria 4997
23 Ga0070678_100154196 3300005456 Bacteria 1854
24 Ga0068867_100007335 3300005459 Bacteria 7803
25 Ga0068867_100097341 3300005459 Bacteria 2242
26 Ga0070697_100120087 3300005536 Bacteria 2198
27 Ga0068853_100361626 3300005539 Bacteria 1352
28 Ga0070672_100000455 3300005543 Bacteria 23832
29 Ga0070695_100001224 3300005545 Bacteria 14101
30 Ga0070665_100272265 3300005548 Bacteria 1695
31 Ga0070664_100043045 3300005564 Bacteria 3810
32 Ga0068857_100362433 3300005577 Bacteria 1344
33 Ga0068852_100385312 3300005616 Bacteria 1376
34 Ga0068859_100196053 3300005617 Bacteria 2104
35 Ga0068864_100061827 3300005618 Bacteria 3244
36 Ga0068864_100336530 3300005618 Bacteria 1421
37 Ga0068861_100018154 3300005719 Bacteria 5005
38 Ga0068851_10007507 3300005834 Bacteria 5011
39 Ga0068870_10015032 3300005840 Bacteria 3666
40 Ga0068863_100076369 3300005841 Bacteria 3170
41 Ga0068863_100480148 3300005841 Bacteria 1222
42 Ga0068860_100126752 3300005843 Bacteria 2447
43 Ga0075367_10159181 3300006178 Bacteria 1404
44 Ga0075369_10092024 3300006186 Bacteria 1354
45 Ga0075366_10008115 3300006195 Bacteria 5822
46 Ga0075366_10038427 3300006195 Bacteria 2826
47 Ga0075366_10055912 3300006195 Bacteria 2344
48 Ga0097621_100083217 3300006237 Bacteria 2666
49 Ga0097621_100459605 3300006237 Bacteria 1148
50 Ga0075370_10005008 3300006353 Bacteria 6518
51 Ga0068871_100028986 3300006358 Bacteria 4345
52 Ga0068871_100115956 3300006358 Bacteria 2258
53 Ga0075436_100032666 3300006914 Bacteria 3587
54 Ga0097620_100196044 3300006931 Bacteria 2104
55 Ga0079104_1000170 3300006946 Bacteria 92339
56 Ga0105251_10000036 3300009011 Bacteria 117656
57 Ga0105244_10000091 3300009036 Bacteria 96351
58 Ga0105244_10006496 3300009036 Bacteria 7552
59 Ga0105250_10126609 3300009092 Bacteria 1052
60 Ga0114129_10520712 3300009147 Bacteria 1550
61 Ga0105243_10011333 3300009148 Bacteria 6746
62 Ga0105243_10017568 3300009148 Bacteria 5410
63 Ga0105243_10686578 3300009148 Bacteria 996
64 Ga0105241_10000012 3300009174 Bacteria 221790
65 Ga0105237_10052397 3300009545 Bacteria 4096
66 Ga0105238_10002477 3300009551 Bacteria 18476
67 Ga0157373_10000753 3300013100 Bacteria 25142
68 Ga0157370_10003496 3300013104 Bacteria 18415
69 Ga0157370_10123765 3300013104 Bacteria 2414
70 Ga0163162_10917646 3300013306 Bacteria 988
71 Ga0163162_11020827 3300013306 Bacteria 935
72 Ga0157375_10796584 3300013308 Bacteria 1094
73 Ga0182008_10004303 3300014497 Bacteria 8338
74 Ga0157377_10000148 3300014745 Bacteria 43833
75 Ga0157376_10149152 3300014969 Bacteria 2107
76 Ga0213872_10000234 3300021361 Bacteria 48837
77 Ga0207425_1000149 3300025245 Bacteria 59740
78 Ga0209129_1000119 3300025258 Bacteria 138904
79 Ga0209129_1017409 3300025258 Bacteria 1410
80 Ga0209673_1016915 3300025273 Bacteria 2708
81 Ga0209025_1010993 3300025294 Bacteria 6042
82 Ga0209025_1092678 3300025294 Bacteria 982
83 Ga0209564_1000024 3300025295 Bacteria 535041
84 Ga0209758_1000194 3300025297 Bacteria 134196
85 Ga0209257_1015539 3300025304 Bacteria 3159
86 Ga0207697_10002378 3300025315 Bacteria 9799
87 Ga0207656_10002185 3300025321 Bacteria 6540
88 Ga0207655_1000044 3300025728 Bacteria 327511
89 Ga0207655_1000100 3300025728 Bacteria 186348
90 Ga0207713_1000054 3300025735 Bacteria 222042
91 Ga0207713_1027998 3300025735 Bacteria 2548
92 Ga0207682_10001553 3300025893 Bacteria 10536
93 Ga0207688_10013643 3300025901 Bacteria 4418
94 Ga0207643_10032353 3300025908 Bacteria 2921
95 Ga0207654_10000015 3300025911 Bacteria 221799
96 Ga0207707_10000119 3300025912 Bacteria 80273
97 Ga0207681_10004835 3300025923 Bacteria 8275
98 Ga0207681_10021338 3300025923 Bacteria 4116
99 Ga0207694_10272898 3300025924 Bacteria 1387
100 Ga0207650_10001429 3300025925 Bacteria 17220
101 Ga0207650_10233211 3300025925 Bacteria 1485
102 Ga0207659_10001098 3300025926 Bacteria 16027
103 Ga0207659_10390707 3300025926 Bacteria 1162
104 Ga0207687_10141006 3300025927 Bacteria 1828
105 Ga0207644_10002026 3300025931 Bacteria 13096
106 Ga0207706_10145803 3300025933 Bacteria 2082
107 Ga0207709_10000704 3300025935 Bacteria 26943
108 Ga0207709_10006194 3300025935 Bacteria 6735
109 Ga0207670_10208314 3300025936 Bacteria 1489
110 Ga0207669_10005459 3300025937 Bacteria 5708
111 Ga0207669_10008563 3300025937 Bacteria 4811
112 Ga0207691_10000973 3300025940 Bacteria 28494
113 Ga0207691_10386668 3300025940 Bacteria 1194
114 Ga0207679_10049602 3300025945 Bacteria 3064
115 Ga0207667_10001570 3300025949 Bacteria 28787
116 Ga0207651_10004482 3300025960 Bacteria 7045
117 Ga0207651_10027976 3300025960 Bacteria 3549
118 Ga0207668_10014077 3300025972 Bacteria 4946
119 Ga0207658_10052078 3300025986 Bacteria 3020
120 Ga0207677_10037361 3300026023 Bacteria 3174
121 Ga0207703_10281779 3300026035 Bacteria 1510
122 Ga0207639_10082527 3300026041 Bacteria 2548
123 Ga0207639_10303257 3300026041 Bacteria 1413
124 Ga0207639_10348818 3300026041 Bacteria 1321
125 Ga0207678_10122656 3300026067 Bacteria 2217
126 Ga0207708_10431812 3300026075 Bacteria 1094
127 Ga0207641_10013978 3300026088 Bacteria 6581
128 Ga0207648_10000405 3300026089 Bacteria 47959
129 Ga0207648_10001421 3300026089 Bacteria 26421
130 Ga0207648_10011155 3300026089 Bacteria 8479
131 Ga0207648_10368809 3300026089 Bacteria 1296
132 Ga0207676_10232166 3300026095 Bacteria 1650
133 Ga0207676_10294434 3300026095 Bacteria 1479
134 Ga0207675_100064808 3300026118 Bacteria 3415
135 Ga0207683_10006544 3300026121 Bacteria 9978
136 Ga0209281_1000072 3300027111 Bacteria 273114
137 Ga0209281_1000092 3300027111 Bacteria 241437
138 Ga0209968_1000731 3300027526 Bacteria 5066
139 Ga0209966_1000103 3300027695 Bacteria 38053
140 Ga0268266_10189118 3300028379 Bacteria 1879
141 Ga0268265_10208847 3300028380 Bacteria 1700
142 Ga0268264_10006305 3300028381 Bacteria 10003
143 Ga0307515_10000494 3300028794 Bacteria 94354
144 Ga0307515_10006133 3300028794 Bacteria 24177
145 Ga0307515_10049031 3300028794 Bacteria 6370
146 Ga0307512_10126304 3300030522 Bacteria 1622
147 Ga0265330_10020871 3300031235 Bacteria 2993
148 Ga0265332_10002902 3300031238 Bacteria 8468
149 Ga0265340_10071766 3300031247 Bacteria 1641
150 Ga0265316_10195042 3300031344 Bacteria 1503
151 Ga0307509_10033969 3300031507 Bacteria 5608
152 Ga0307408_100000298 3300031548 Bacteria 47947
153 Ga0307508_10000096 3300031616 Bacteria 103730
154 Ga0265314_10001612 3300031711 Bacteria 24767
155 Ga0316576_10168445 3300031727 Bacteria 1653
156 Ga0307516_10009880 3300031730 Bacteria 10581
157 Ga0307516_10024030 3300031730 Bacteria 6233
158 Ga0307516_10245318 3300031730 Bacteria 1488
159 Ga0307406_10000234 3300031901 Bacteria 33721
160 Ga0307412_10559764 3300031911 Bacteria 962
161 Ga0373931_0010076 3300035691 Bacteria 4533
162 Ga0373925_0122491 3300037068 Bacteria 2020
163 Ga0395905_0002324 3300037471 Bacteria 21271
164 Ga0395901_0274984 3300038443 Bacteria 1751
165 Ga0436361_0312167 3300039447 Bacteria 74288
166 Ga0451845_0816322 3300041501 Bacteria 1317
167 Ga0451849_0430195 3300041505 Bacteria 1812
168 Ga0439432_012128 3300042006 Bacteria 2957
169 Ga0450894_003502 3300042131 Bacteria 2052
170 Ga0466969_0004185 3300044656 Bacteria 7656
171 Ga0466969_0050572 3300044656 Bacteria 2048
172 Ga0466972_0000810 3300044658 Bacteria 14909
173 Ga0466966_0007654 3300044684 Bacteria 7159
174 Ga0466961_0001070 3300044693 Bacteria 16876
175 Ga0466961_0057507 3300044693 Bacteria 2475
176 Ga0453684_0003387 3300044712 Bacteria 36051
177 Ga0466959_0069954 3300045049 Bacteria 2542
178 Ga0466959_0144301 3300045049 Bacteria 1680
179 Ga0495627_096135 3300046453 Bacteria 849
180 Ga0495590_0018089 3300046457 Bacteria 2526
181 Ga0495590_0024012 3300046457 Bacteria 2150
182 Ga0495585_0082933 3300046492 Bacteria 1735
183 Ga0495583_0033232 3300046506 Bacteria 2481
184 Ga0495583_0151420 3300046506 Bacteria 961
185 Ga0495606_0112657 3300046507 Bacteria 1639
186 Ga0495610_0021443 3300046512 Bacteria 3553
187 Ga0495610_0048178 3300046512 Bacteria 2093
188 Ga0495631_0126000 3300046518 Bacteria 1101
189 Ga0495632_0009482 3300046519 Bacteria 5867
190 Ga0495632_0031343 3300046519 Bacteria 2749
191 Ga0495632_0113553 3300046519 Bacteria 1270
192 Ga0495632_0162541 3300046519 Bacteria 1028
193 Ga0495643_0008224 3300046522 Bacteria 6629
194 Ga0495648_0129022 3300046524 Bacteria 1347
195 Ga0495648_0249699 3300046524 Bacteria 857
196 Ga0495625_0098688 3300046660 Bacteria 2009
197 Ga0495623_0058812 3300046679 Bacteria 2416
198 Ga0495649_0005842 3300046694 Bacteria 7742
199 Ga0495649_0053010 3300046694 Bacteria 2197
200 Ga0495660_0005113 3300046810 Bacteria 7881
201 Ga0495681_0095200 3300047470 Bacteria 1309
202 Ga0495686_0157794 3300047472 Bacteria 1328
203 Ga0495686_0370023 3300047472 Bacteria 775
204 Ga0495626_0064724 3300048091 Bacteria 1656
205 Ga0496116_0032064 3300048919 Bacteria 3751
206 Ga0496118_0025615 3300048921 Bacteria 5050
207 Ga0496118_0281877 3300048921 Bacteria 924
208 Ga0496121_0087663 3300048924 Bacteria 2442
209 Ga0496121_0347785 3300048924 Bacteria 988
210 Ga0496122_0029739 3300048925 Bacteria 4597
211 Ga0496122_0242568 3300048925 Bacteria 1014
212 Ga0496123_0005855 3300048926 Bacteria 12177
213 Ga0496123_0208732 3300048926 Bacteria 994
214 Ga0496124_0209100 3300048927 Bacteria 1478
215 Ga0496125_0290730 3300048928 Bacteria 1006
216 Ga0496126_0549671 3300048929 Bacteria 916
217 Ga0501033_0126165 3300049570 Bacteria 1856
218 Ga0501034_0049003 3300049571 Bacteria 4263
219 Ga0501043_0046332 3300049579 Bacteria 3419
220 Ga0501047_0418565 3300049581 Bacteria 1171
221 Ga0501072_0049976 3300049588 Bacteria 3292
222 Ga0501081_0225614 3300049743 Bacteria 1363
223 Ga0501044_0116994 3300049823 Bacteria 2670
224 Ga0501044_0293886 3300049823 Bacteria 1555
225 nmdc:mga0k408_215770_c1 3300050493 Bacteria 1146
226 nmdc:mga0k408_7470_c1 3300050493 Bacteria 5835
227 nmdc:mga0k408_88639_c1 3300050493 Bacteria 1817
228 nmdc:mga07m45_35147_c1 3300050496 Bacteria 2787
229 nmdc:mga07m45_90775_c1 3300050496 Bacteria 1750
230 nmdc:mga08x19_50097_c1 3300050514 Bacteria 2679
231 Ga0500578_0093482 3300053086 Bacteria 1908
232 Ga0500559_0009963 3300053136 Bacteria 4094
233 Ga0500568_0030970 3300053139 Bacteria 2212
234 Ga0501082_0069957 3300060353 Bacteria 3022

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037068 Ga0373925_0122491 Ga0373925_0122491_456_1190 232
2 3300005456 Ga0070678_100154196 Ga0070678_1001541962 237
3 3300053136 Ga0500559_0009963 Ga0500559_0009963_2243_2962 239
4 3300003347 JGI26128J50194_1001710 JGI26128J50194_10017102 240
5 3300013104 Ga0157370_10123765 Ga0157370_101237652 240
6 3300027526 Ga0209968_1000731 Ga0209968_10007313 240
7 3300027695 Ga0209966_1000103 Ga0209966_100010330 240
8 3300009147 Ga0114129_10520712 Ga0114129_105207122 241
9 3300046679 Ga0495623_0058812 Ga0495623_0058812_512_1243 243
10 iso_pu_bacteria 2609459761 2609911752 243
11 iso_pu_bacteria 2643221734 2644736996 243
12 iso_pu_bacteria 2945874760 2945876158 243
13 3300005341 Ga0070691_10007604 Ga0070691_100076042 244
14 3300005545 Ga0070695_100001224 Ga0070695_1000012242 244
15 3300005719 Ga0068861_100018154 Ga0068861_1000181543 244
16 3300009036 Ga0105244_10000091 Ga0105244_1000009126 244
17 3300025728 Ga0207655_1000044 Ga0207655_100004426 244
18 3300026118 Ga0207675_100064808 Ga0207675_1000648083 244
19 3300047472 Ga0495686_0370023 Ga0495686_0370023_17_751 244
20 3300049570 Ga0501033_0126165 Ga0501033_0126165_953_1690 244
21 3300049588 Ga0501072_0049976 Ga0501072_0049976_1840_2574 244
22 3300049743 Ga0501081_0225614 Ga0501081_0225614_233_967 244
23 3300049823 Ga0501044_0116994 Ga0501044_0116994_1762_2499 244
24 iso_pu_bacteria 2643221570 2643864038 244
25 iso_pu_bacteria 2643221596 2643992349 244
26 iso_pu_bacteria 2643221609 2644060015 244
27 iso_pu_bacteria 2881101125 2881104265 244
28 iso_pu_bacteria 2932422444 2932425518 244
29 iso_pu_bacteria 2990710928 2990714568 244
30 iso_pu_bacteria 2510917030 2511198219 246
31 iso_pu_bacteria 2582581298 2585223847 246
32 iso_pu_bacteria 2582581299 2585228818 246
33 iso_pu_bacteria 2585427529 2585549070 246
34 iso_pu_bacteria 2643221599 2644002392 246
35 iso_pu_bacteria 2919100787 2919105308 246
36 iso_pu_bacteria 3005445848 3005449580 246
37 3300003775 Ga0055524_1000104 Ga0055524_100010413 247
38 3300005617 Ga0068859_100196053 Ga0068859_1001960533 247
39 3300005841 Ga0068863_100076369 Ga0068863_1000763692 247
40 3300005843 Ga0068860_100126752 Ga0068860_1001267521 247
41 3300006931 Ga0097620_100196044 Ga0097620_1001960443 247
42 3300013308 Ga0157375_10796584 Ga0157375_107965841 247
43 3300026035 Ga0207703_10281779 Ga0207703_102817792 247
44 3300026088 Ga0207641_10013978 Ga0207641_100139786 247
45 3300028381 Ga0268264_10006305 Ga0268264_100063052 247
46 iso_pu_bacteria 2970524798 2970526417 247
47 3300006195 Ga0075366_10008115 Ga0075366_100081157 248
48 3300006914 Ga0075436_100032666 Ga0075436_1000326664 248
49 3300009011 Ga0105251_10000036 Ga0105251_1000003615 248
50 3300009036 Ga0105244_10006496 Ga0105244_100064963 248
51 3300009174 Ga0105241_10000012 Ga0105241_10000012153 248
52 3300013100 Ga0157373_10000753 Ga0157373_1000075311 248
53 3300014497 Ga0182008_10004303 Ga0182008_100043032 248
54 3300025728 Ga0207655_1000100 Ga0207655_1000100103 248
55 3300025735 Ga0207713_1000054 Ga0207713_1000054153 248
56 3300025735 Ga0207713_1027998 Ga0207713_10279982 248
57 3300025911 Ga0207654_10000015 Ga0207654_10000015153 248
58 3300026075 Ga0207708_10431812 Ga0207708_104318121 248
59 3300027111 Ga0209281_1000092 Ga0209281_1000092173 248
60 3300031235 Ga0265330_10020871 Ga0265330_100208712 248
61 3300031238 Ga0265332_10002902 Ga0265332_1000290210 248
62 3300031247 Ga0265340_10071766 Ga0265340_100717662 248
63 3300031344 Ga0265316_10195042 Ga0265316_101950421 248
64 3300031711 Ga0265314_10001612 Ga0265314_100016125 248
65 3300035691 Ga0373931_0010076 Ga0373931_0010076_2426_3172 248
66 3300037471 Ga0395905_0002324 Ga0395905_0002324_5588_6334 248
67 3300042006 Ga0439432_012128 Ga0439432_012128_1618_2364 248
68 3300042131 Ga0450894_003502 Ga0450894_003502_104_850 248
69 3300044656 Ga0466969_0004185 Ga0466969_0004185_729_1475 248
70 3300044693 Ga0466961_0001070 Ga0466961_0001070_5441_6187 248
71 3300045049 Ga0466959_0144301 Ga0466959_0144301_646_1392 248
72 3300050493 nmdc:mga0k408_88639_c1 nmdc:mga0k408_88639_c1_326_1072 248
73 3300050514 nmdc:mga08x19_50097_c1 nmdc:mga08x19_50097_c1_1650_2396 248
74 3300005536 Ga0070697_100120087 Ga0070697_1001200872 249
75 3300006946 Ga0079104_1000170 Ga0079104_100017080 249
76 3300009148 Ga0105243_10017568 Ga0105243_100175683 249
77 3300025935 Ga0207709_10000704 Ga0207709_1000070419 249
78 3300026041 Ga0207639_10082527 Ga0207639_100825273 249
79 3300026089 Ga0207648_10368809 Ga0207648_103688092 249
80 3300027111 Ga0209281_1000072 Ga0209281_1000072178 249
81 3300031548 Ga0307408_100000298 Ga0307408_10000029815 249
82 3300031901 Ga0307406_10000234 Ga0307406_100002347 249
83 3300031911 Ga0307412_10559764 Ga0307412_105597642 249
84 3300041501 Ga0451845_0816322 Ga0451845_0816322_119_868 249
85 3300046512 Ga0495610_0048178 Ga0495610_0048178_1194_1943 249
86 3300048921 Ga0496118_0281877 Ga0496118_0281877_109_861 249
87 3300048924 Ga0496121_0347785 Ga0496121_0347785_131_883 249
88 3300048925 Ga0496122_0242568 Ga0496122_0242568_147_899 249
89 3300048926 Ga0496123_0208732 Ga0496123_0208732_108_860 249
90 3300048928 Ga0496125_0290730 Ga0496125_0290730_111_863 249
91 3300048929 Ga0496126_0549671 Ga0496126_0549671_53_805 249
92 3300003323 rootH1_10203932 rootH1_102039322 250
93 3300005331 Ga0070670_100073215 Ga0070670_1000732153 250
94 3300005339 Ga0070660_100369732 Ga0070660_1003697322 250
95 3300005353 Ga0070669_100011302 Ga0070669_1000113026 250
96 3300005548 Ga0070665_100272265 Ga0070665_1002722653 250
97 3300005577 Ga0068857_100362433 Ga0068857_1003624332 250
98 3300005618 Ga0068864_100336530 Ga0068864_1003365302 250
99 3300005841 Ga0068863_100480148 Ga0068863_1004801482 250
100 3300006186 Ga0075369_10092024 Ga0075369_100920242 250
101 3300006237 Ga0097621_100083217 Ga0097621_1000832172 250
102 3300006358 Ga0068871_100115956 Ga0068871_1001159563 250
103 3300009092 Ga0105250_10126609 Ga0105250_101266092 250
104 3300013306 Ga0163162_11020827 Ga0163162_110208271 250
105 3300025258 Ga0209129_1017409 Ga0209129_10174092 250
106 3300025294 Ga0209025_1010993 Ga0209025_10109936 250
107 3300025294 Ga0209025_1092678 Ga0209025_10926782 250
108 3300025923 Ga0207681_10021338 Ga0207681_100213384 250
109 3300025925 Ga0207650_10233211 Ga0207650_102332112 250
110 3300025926 Ga0207659_10390707 Ga0207659_103907071 250
111 3300025940 Ga0207691_10386668 Ga0207691_103866682 250
112 3300025960 Ga0207651_10027976 Ga0207651_100279762 250
113 3300026095 Ga0207676_10232166 Ga0207676_102321662 250
114 3300028379 Ga0268266_10189118 Ga0268266_101891183 250
115 3300028380 Ga0268265_10208847 Ga0268265_102088472 250
116 3300038443 Ga0395901_0274984 Ga0395901_0274984_208_960 250
117 3300046453 Ga0495627_096135 Ga0495627_096135_73_825 250
118 3300046457 Ga0495590_0024012 Ga0495590_0024012_1342_2094 250
119 3300046492 Ga0495585_0082933 Ga0495585_0082933_530_1282 250
120 3300046506 Ga0495583_0033232 Ga0495583_0033232_246_998 250
121 3300046506 Ga0495583_0151420 Ga0495583_0151420_96_848 250
122 3300046507 Ga0495606_0112657 Ga0495606_0112657_33_785 250
123 3300046512 Ga0495610_0021443 Ga0495610_0021443_1877_2629 250
124 3300046518 Ga0495631_0126000 Ga0495631_0126000_182_934 250
125 3300046519 Ga0495632_0031343 Ga0495632_0031343_1249_2010 250
126 3300046519 Ga0495632_0162541 Ga0495632_0162541_168_920 250
127 3300046522 Ga0495643_0008224 Ga0495643_0008224_5259_6011 250
128 3300046524 Ga0495648_0249699 Ga0495648_0249699_86_838 250
129 3300046660 Ga0495625_0098688 Ga0495625_0098688_880_1632 250
130 3300046694 Ga0495649_0053010 Ga0495649_0053010_931_1683 250
131 3300047470 Ga0495681_0095200 Ga0495681_0095200_163_915 250
132 3300047472 Ga0495686_0157794 Ga0495686_0157794_460_1212 250
133 3300048919 Ga0496116_0032064 Ga0496116_0032064_776_1528 250
134 3300048921 Ga0496118_0025615 Ga0496118_0025615_391_1143 250
135 3300048924 Ga0496121_0087663 Ga0496121_0087663_1072_1824 250
136 3300048925 Ga0496122_0029739 Ga0496122_0029739_3550_4302 250
137 3300048926 Ga0496123_0005855 Ga0496123_0005855_1493_2245 250
138 3300048927 Ga0496124_0209100 Ga0496124_0209100_543_1295 250
139 3300049579 Ga0501043_0046332 Ga0501043_0046332_1598_2350 250
140 3300049581 Ga0501047_0418565 Ga0501047_0418565_368_1120 250
141 3300053139 Ga0500568_0030970 Ga0500568_0030970_202_954 250
142 3300060353 Ga0501082_0069957 Ga0501082_0069957_1343_2095 250
143 3300009148 Ga0105243_10686578 Ga0105243_106865781 251
144 3300028794 Ga0307515_10049031 Ga0307515_100490314 251
145 3300031507 Ga0307509_10033969 Ga0307509_100339695 251
146 3300044656 Ga0466969_0050572 Ga0466969_0050572_371_1126 251
147 3300044684 Ga0466966_0007654 Ga0466966_0007654_1688_2443 251
148 3300044693 Ga0466961_0057507 Ga0466961_0057507_1625_2380 251
149 3300045049 Ga0466959_0069954 Ga0466959_0069954_394_1149 251
150 iso_pu_bacteria 2643221654 2644305721 251
151 3300021361 Ga0213872_10000234 Ga0213872_1000023451 252
152 3300039447 Ga0436361_0312167 Ga0436361_0312167_50836_51594 252
153 3300046524 Ga0495648_0129022 Ga0495648_0129022_299_1057 252
154 3300049571 Ga0501034_0049003 Ga0501034_0049003_3310_4068 252
155 3300049823 Ga0501044_0293886 Ga0501044_0293886_658_1416 252
156 3300031727 Ga0316576_10168445 Ga0316576_101684452 253
157 3300005328 Ga0070676_10048845 Ga0070676_100488452 254
158 3300005331 Ga0070670_100002787 Ga0070670_1000027874 254
159 3300005333 Ga0070677_10003177 Ga0070677_100031772 254
160 3300005340 Ga0070689_100241981 Ga0070689_1002419812 254
161 3300005347 Ga0070668_100106409 Ga0070668_1001064092 254
162 3300005353 Ga0070669_100006934 Ga0070669_1000069343 254
163 3300005354 Ga0070675_100006913 Ga0070675_1000069135 254
164 3300005355 Ga0070671_100071999 Ga0070671_1000719992 254
165 3300005356 Ga0070674_100001905 Ga0070674_1000019053 254
166 3300005364 Ga0070673_100074415 Ga0070673_1000744152 254
167 3300005367 Ga0070667_100028811 Ga0070667_1000288113 254
168 3300005456 Ga0070678_100014343 Ga0070678_1000143432 254
169 3300005459 Ga0068867_100007335 Ga0068867_1000073352 254
170 3300005539 Ga0068853_100361626 Ga0068853_1003616261 254
171 3300005543 Ga0070672_100000455 Ga0070672_10000045515 254
172 3300005564 Ga0070664_100043045 Ga0070664_1000430452 254
173 3300005616 Ga0068852_100385312 Ga0068852_1003853122 254
174 3300005618 Ga0068864_100061827 Ga0068864_1000618272 254
175 3300005834 Ga0068851_10007507 Ga0068851_100075072 254
176 3300005840 Ga0068870_10015032 Ga0068870_100150322 254
177 3300006237 Ga0097621_100459605 Ga0097621_1004596052 254
178 3300006358 Ga0068871_100028986 Ga0068871_1000289863 254
179 3300009148 Ga0105243_10011333 Ga0105243_100113335 254
180 3300009545 Ga0105237_10052397 Ga0105237_100523971 254
181 3300009551 Ga0105238_10002477 Ga0105238_1000247718 254
182 3300013104 Ga0157370_10003496 Ga0157370_1000349619 254
183 3300013306 Ga0163162_10917646 Ga0163162_109176462 254
184 3300014745 Ga0157377_10000148 Ga0157377_100001488 254
185 3300014969 Ga0157376_10149152 Ga0157376_101491522 254
186 3300025315 Ga0207697_10002378 Ga0207697_1000237810 254
187 3300025321 Ga0207656_10002185 Ga0207656_100021852 254
188 3300025893 Ga0207682_10001553 Ga0207682_100015536 254
189 3300025901 Ga0207688_10013643 Ga0207688_100136432 254
190 3300025908 Ga0207643_10032353 Ga0207643_100323533 254
191 3300025912 Ga0207707_10000119 Ga0207707_100001198 254
192 3300025923 Ga0207681_10004835 Ga0207681_100048352 254
193 3300025924 Ga0207694_10272898 Ga0207694_102728982 254
194 3300025925 Ga0207650_10001429 Ga0207650_100014292 254
195 3300025926 Ga0207659_10001098 Ga0207659_1000109812 254
196 3300025931 Ga0207644_10002026 Ga0207644_100020262 254
197 3300025933 Ga0207706_10145803 Ga0207706_101458032 254
198 3300025935 Ga0207709_10006194 Ga0207709_100061944 254
199 3300025936 Ga0207670_10208314 Ga0207670_102083142 254
200 3300025937 Ga0207669_10005459 Ga0207669_100054596 254
201 3300025940 Ga0207691_10000973 Ga0207691_1000097320 254
202 3300025945 Ga0207679_10049602 Ga0207679_100496022 254
203 3300025949 Ga0207667_10001570 Ga0207667_1000157026 254
204 3300025960 Ga0207651_10004482 Ga0207651_100044822 254
205 3300025972 Ga0207668_10014077 Ga0207668_100140773 254
206 3300025986 Ga0207658_10052078 Ga0207658_100520782 254
207 3300026023 Ga0207677_10037361 Ga0207677_100373613 254
208 3300026041 Ga0207639_10303257 Ga0207639_103032572 254
209 3300026041 Ga0207639_10348818 Ga0207639_103488182 254
210 3300026089 Ga0207648_10000405 Ga0207648_1000040542 254
211 3300026089 Ga0207648_10001421 Ga0207648_100014216 254
212 3300026095 Ga0207676_10294434 Ga0207676_102944341 254
213 3300026121 Ga0207683_10006544 Ga0207683_100065442 254
214 3300005356 Ga0070674_100008298 Ga0070674_1000082982 255
215 3300005459 Ga0068867_100097341 Ga0068867_1000973412 255
216 3300006178 Ga0075367_10159181 Ga0075367_101591812 255
217 3300025937 Ga0207669_10008563 Ga0207669_100085633 255
218 3300026089 Ga0207648_10011155 Ga0207648_100111557 255
219 3300028794 Ga0307515_10000494 Ga0307515_1000049434 255
220 3300028794 Ga0307515_10006133 Ga0307515_100061339 255
221 3300030522 Ga0307512_10126304 Ga0307512_101263042 255
222 3300031616 Ga0307508_10000096 Ga0307508_1000009627 255
223 3300031730 Ga0307516_10009880 Ga0307516_1000988011 255
224 3300031730 Ga0307516_10024030 Ga0307516_100240302 255
225 3300041505 Ga0451849_0430195 Ga0451849_0430195_281_1048 255
226 3300046519 Ga0495632_0113553 Ga0495632_0113553_264_1031 255
227 3300050493 nmdc:mga0k408_215770_c1 nmdc:mga0k408_215770_c1_283_1050 255
228 3300050493 nmdc:mga0k408_7470_c1 nmdc:mga0k408_7470_c1_4287_5054 255
229 3300050496 nmdc:mga07m45_90775_c1 nmdc:mga07m45_90775_c1_466_1233 255
230 3300006195 Ga0075366_10055912 Ga0075366_100559122 256
231 3300025927 Ga0207687_10141006 Ga0207687_101410062 256
232 3300026067 Ga0207678_10122656 Ga0207678_101226561 257
233 3300044712 Ga0453684_0003387 Ga0453684_0003387_21580_22353 257
234 3300044658 Ga0466972_0000810 Ga0466972_0000810_9456_10247 258
235 3300006195 Ga0075366_10038427 Ga0075366_100384272 259
236 3300006353 Ga0075370_10005008 Ga0075370_100050082 259
237 3300031730 Ga0307516_10245318 Ga0307516_102453182 259
238 3300046457 Ga0495590_0018089 Ga0495590_0018089_1023_1802 259
239 3300046519 Ga0495632_0009482 Ga0495632_0009482_4863_5642 259
240 3300046694 Ga0495649_0005842 Ga0495649_0005842_549_1328 259
241 3300046810 Ga0495660_0005113 Ga0495660_0005113_5891_6670 259
242 3300048091 Ga0495626_0064724 Ga0495626_0064724_650_1429 259
243 3300050496 nmdc:mga07m45_35147_c1 nmdc:mga07m45_35147_c1_551_1330 259
244 3300053086 Ga0500578_0093482 Ga0500578_0093482_444_1223 259
245 3300003215 JGI25153J46596_10002338 JGI25153J46596_100023385 262
246 3300003771 Ga0055526_1001344 Ga0055526_10013449 262
247 3300025245 Ga0207425_1000149 Ga0207425_100014918 262
248 3300025258 Ga0209129_1000119 Ga0209129_100011990 262
249 3300025273 Ga0209673_1016915 Ga0209673_10169153 262
250 3300025295 Ga0209564_1000024 Ga0209564_100002490 262
251 3300025297 Ga0209758_1000194 Ga0209758_100019477 262
252 3300025304 Ga0209257_1015539 Ga0209257_10155392 262

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

44

241

0.95

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

50

289

0.91

PF08659

KR

KR domain

45

233

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
4iqg-assembly1.cif.gz_B crystal structure of bpro0239 oxidoreductase from polaromonas sp. js666 in nadp bound form 0.9938 17 262
4e3z-assembly1.cif.gz_B crystal structure of a oxidoreductase from rhizobium etli cfn 42 0.9901 17 262
8bcj-assembly2.cif.gz_D crystal structure of short-chain dehydrogenase pa3128 from pseudomonas aeruginosa pao1 in complex with nadp+ 0.9882 17 262
8bci-assembly2.cif.gz_C crystal structure of short-chain dehydrogenase pa3128 from pseudomonas aeruginosa pao1 0.9881 17 262
4e3z-assembly1.cif.gz_A crystal structure of a oxidoreductase from rhizobium etli cfn 42 0.9868 17 262
ID Description Score Start End Superfamily
4jigA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9827 17 262 3.40.50.720
6ixmB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9641 15 261 3.40.50.720
4jigA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9623 17 262 3.40.50.720
4hsyA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9573 14 261 3.40.50.720
4weoA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9516 13 261 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2N4YNE3-F1-model_v4 NAD(P)-dependent oxidoreductase 0.997 120 262 GO:0016614
AF-A0A439JYE8-F1-model_v4 SDR family oxidoreductase 0.9969 108 262 GO:0016616
GO:0030497
AF-A0A258QCA9-F1-model_v4 deleted 0.9957 17 198
AF-A0A350CKN0-F1-model_v4 NAD(P)-dependent oxidoreductase 0.9955 101 246 GO:0016614
AF-A0A380PTK5-F1-model_v4 Oxidoreductase YgfF (EC 1.1.1.47) 0.9951 69 262 GO:0047936

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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