F361504

General Info

Members Datasets Scaffolds Average Seq Length
250 184 220 433

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10020500|Ga0105240_100205006
Length 480
Sequence MNPGCASGVDMNTLCGSGSRRESPIAWEARELNEEEYMGMSSRQRLLIPLAALSVVGLALAGCAETGSGGGNSDNVKGQTVKISGGITGSEADALNASFTKFTKDTGIKVQYTGDKSFEGNIVTKVQGGSAPDIAIVPQPGLLATLVGTGQVVQPDATTTSNVSKYWSKSWKTYGTVGGKFYAAPMLANVKGFVWYSPAKFKEWGVTIPKTWDELLTLTKTIQEKTNAAPWCVGFSSGDASGWPGTDWIEDLVLRQAGPDVYDQWVAGKVKFTDQPIKDAFDAVGKILLNPKYVNAGFGDVKSINSTAFADVAAKVADGTCPMTHQASFLSSNFLTVKTKDGKTPTIAPDGDVYAFLLPGIKEGSSSVEAGGEFVASFSNKKAVQMVQDFMSSPDFANARVKLGGVISANNGADPSLASSQFLTDAMKTLQDPKTVARFDASDLMPATVGSGSFWKGMVNWVDGTPTDQVLSAIQAGYQN

Samples

Sample ID Description Type Environment
1 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
2 2643221575 Microbacterium sp. Root61 Isolate Unclassified
3 2643221597 Microbacterium sp. Root180 Isolate Unclassified
4 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
5 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
6 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
7 2773857759 Microbacterium sp. 1294 Isolate Unclassified
8 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
9 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
10 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
11 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
12 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
13 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
14 2919069694 Microbacterium sp. 1154 Isolate Unclassified
15 2919395869 Microbacterium resistens 2980 Isolate Unclassified
16 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
17 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
18 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
19 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
20 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
21 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
22 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
23 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
24 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
25 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
26 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
27 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
28 3300003308 Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_20 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
29 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
30 3300003579 Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_45 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
31 3300003735 Avena fatua rhizosphere microbial communities - H4_Bulk_Litter_23 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
32 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
33 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
34 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
35 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
36 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
37 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
38 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
41 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
44 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
45 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
46 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
47 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
48 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
49 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
57 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
67 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
68 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
69 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
70 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
71 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
72 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
73 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
74 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
75 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
76 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
77 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
78 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
79 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
100 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
101 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
102 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
103 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
104 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
105 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
106 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
107 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
108 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
109 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
110 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
111 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
112 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
113 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
114 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
115 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
116 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
117 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
118 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
119 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
120 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
121 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
122 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
123 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
124 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
125 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
126 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
127 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
128 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
129 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
130 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
131 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
132 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
133 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
134 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
135 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
136 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
137 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
138 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
139 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
140 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
141 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
142 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
143 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
144 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
145 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
146 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
147 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
148 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
149 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
150 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
151 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
152 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
153 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
154 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
155 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
156 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
157 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
158 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
159 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
160 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
161 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
166 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
167 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
168 3300059477 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 50R_CW_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
169 3300059490 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 7R_CD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
170 3300059503 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 21R_SD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
171 3300059504 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 23R_SD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
172 3300059505 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 24R_SD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
173 3300059605 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 71R_SD_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
174 3300059640 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 8R_CD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
175 3300059643 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 13R_AD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
176 3300059645 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 18R_SW_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
177 3300059652 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 72R_SD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
178 3300060344 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 36R_AW_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
179 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
180 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
181 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
182 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
183 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
184 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 74.8
Metatranscriptomes 13.2
Isolates 12

Biome Distribution

Category Percentage (%)
Aerial Root 0.8
Bulb 0
Endosphere 1.2
Nodule 0
Rhizoplane 2.4
Rhizosphere 71.6
Stem 0
Stem Tuber 0
Unclassified 24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10020844 3300001979 Bacteria 2280
2 JGI25154J39366_1000619 3300002738 Bacteria 16888
3 Ga0006777J48905_1039903 3300003308 Bacteria 1562
4 Ga0006562J51391_1003932 3300003578 Bacteria 12980
5 Ga0007429J51699_1045879 3300003579 Bacteria 1479
6 Ga0006780_1023901 3300003735 Bacteria 1549
7 Ga0058861_11938557 3300004800 Bacteria 1481
8 Ga0058862_12678353 3300004803 Bacteria 1903
9 Ga0070658_10023388 3300005327 Bacteria 4961
10 Ga0070666_10094390 3300005335 Bacteria 2058
11 Ga0068868_100112710 3300005338 Bacteria 2211
12 Ga0070713_100005188 3300005436 Bacteria 8872
13 Ga0070681_10103864 3300005458 Bacteria 2785
14 Ga0068855_100035689 3300005563 Bacteria 5922
15 Ga0068855_100221109 3300005563 Bacteria 2123
16 Ga0068857_100022787 3300005577 Bacteria 5510
17 Ga0068856_100012126 3300005614 Bacteria 8348
18 Ga0068864_100011912 3300005618 Bacteria 7182
19 Ga0068851_10000022 3300005834 Bacteria 129607
20 Ga0068863_100029404 3300005841 Bacteria 5245
21 Ga0068863_100078198 3300005841 Bacteria 3132
22 Ga0070717_10001837 3300006028 Bacteria 14827
23 Ga0075365_10002113 3300006038 Bacteria 9514
24 Ga0070712_100046212 3300006175 Bacteria 3009
25 Ga0070712_100180691 3300006175 Bacteria 1644
26 Ga0075369_10054868 3300006186 Bacteria 1730
27 Ga0105244_10006366 3300009036 Bacteria 7663
28 Ga0105244_10018241 3300009036 Bacteria 3942
29 Ga0105240_10020500 3300009093 Bacteria 8814
30 Ga0105245_10031431 3300009098 Bacteria 4698
31 Ga0105247_10035817 3300009101 Bacteria 3026
32 Ga0114129_10002127 3300009147 Bacteria 27301
33 Ga0105243_10044776 3300009148 Bacteria 3474
34 Ga0105243_10147523 3300009148 Bacteria 2014
35 Ga0105241_10006908 3300009174 Bacteria 8354
36 Ga0105248_10019892 3300009177 Bacteria 7434
37 Ga0105248_10076870 3300009177 Bacteria 3752
38 Ga0105237_10016871 3300009545 Bacteria 7577
39 Ga0105237_10025939 3300009545 Bacteria 5991
40 Ga0105238_10019256 3300009551 Bacteria 6953
41 Ga0157370_10003894 3300013104 Bacteria 17388
42 Ga0157370_10139800 3300013104 Bacteria 2256
43 Ga0157369_10015289 3300013105 Bacteria 8654
44 Ga0171462_1004 3300013250 Bacteria 678877
45 Ga0157374_10016310 3300013296 Bacteria 6525
46 Ga0163162_10268423 3300013306 Bacteria 1838
47 Ga0157372_10163321 3300013307 Bacteria 2574
48 Ga0157375_10140799 3300013308 Bacteria 2539
49 Ga0157379_10008786 3300014968 Bacteria 8812
50 Ga0163161_10141343 3300017792 Bacteria 1823
51 Ga0197907_10715430 3300020069 Bacteria 1529
52 Ga0197907_11470711 3300020069 Bacteria 1980
53 Ga0206356_10180402 3300020070 Bacteria 1693
54 Ga0206349_1653994 3300020075 Bacteria 1592
55 Ga0206355_1635741 3300020076 Bacteria 1792
56 Ga0206351_10154265 3300020077 Bacteria 1646
57 Ga0206352_10000158 3300020078 Bacteria 2394
58 Ga0206352_11152728 3300020078 Bacteria 1648
59 Ga0206350_10610390 3300020080 Bacteria 1795
60 Ga0206353_10474132 3300020082 Bacteria 1675
61 Ga0206353_11309367 3300020082 Bacteria 2310
62 Ga0154015_1148387 3300020610 Bacteria 2068
63 Ga0154015_1654053 3300020610 Bacteria 3808
64 Ga0224712_10005270 3300022467 Bacteria 3582
65 Ga0224712_10054439 3300022467 Bacteria 1570
66 Ga0209646_1000013 3300025246 Bacteria 565830
67 Ga0207656_10000005 3300025321 Bacteria 490514
68 Ga0207655_1002145 3300025728 Bacteria 16449
69 Ga0207710_10048682 3300025900 Bacteria 1898
70 Ga0207647_10042636 3300025904 Bacteria 2846
71 Ga0207705_10009797 3300025909 Bacteria 6973
72 Ga0207705_10014353 3300025909 Bacteria 5700
73 Ga0207654_10000001 3300025911 Bacteria 1816198
74 Ga0207695_10016888 3300025913 Bacteria 8518
75 Ga0207671_10000016 3300025914 Bacteria 435413
76 Ga0207671_10030889 3300025914 Bacteria 3994
77 Ga0207671_10099177 3300025914 Bacteria 2204
78 Ga0207693_10034067 3300025915 Bacteria 4017
79 Ga0207693_10041939 3300025915 Bacteria 3602
80 Ga0207657_10093695 3300025919 Bacteria 2501
81 Ga0207694_10000057 3300025924 Bacteria 146441
82 Ga0207700_10052580 3300025928 Bacteria 3046
83 Ga0207664_10028376 3300025929 Bacteria 4252
84 Ga0207709_10094976 3300025935 Bacteria 1958
85 Ga0207711_10036280 3300025941 Bacteria 4183
86 Ga0207711_10153411 3300025941 Bacteria 2080
87 Ga0207667_10013659 3300025949 Bacteria 9282
88 Ga0207667_10016329 3300025949 Bacteria 8390
89 Ga0207702_10023022 3300026078 Bacteria 5167
90 Ga0207641_10037352 3300026088 Bacteria 4056
91 Ga0207674_10013981 3300026116 Bacteria 8875
92 Ga0207698_10005234 3300026142 Bacteria 7979
93 Ga0207698_10045734 3300026142 Bacteria 3300
94 Ga0265334_10001511 3300028573 Bacteria 11233
95 Ga0265340_10005878 3300031247 Bacteria 6786
96 Ga0265340_10009975 3300031247 Bacteria 5088
97 Ga0316579_10030594 3300031691 Bacteria 2461
98 Ga0316576_10011343 3300031727 Bacteria 5836
99 Ga0316577_10010427 3300031733 Bacteria 5017
100 Ga0307518_10071855 3300031838 Bacteria 2506
101 Ga0307416_100087260 3300032002 Bacteria 2663
102 Ga0316593_10001687 3300032168 Bacteria 4976
103 Ga0373957_0054186 3300035120 Bacteria 1540
104 Ga0316574_0000849 3300035398 Bacteria 13403
105 Ga0316584_0011616 3300036712 Bacteria 6193
106 Ga0316584_0076466 3300036712 Bacteria 2509
107 Ga0316584_0111284 3300036712 Bacteria 2049
108 Ga0373925_0000043 3300037068 Bacteria 134268
109 Ga0395899_0076995 3300037312 Bacteria 2434
110 Ga0395900_0070170 3300037418 Bacteria 3602
111 Ga0395900_0286141 3300037418 Bacteria 1639
112 Ga0395898_0071846 3300037466 Bacteria 3343
113 Ga0451793_0176024 3300041452 Bacteria 2263
114 Ga0466969_0000444 3300044656 Bacteria 22697
115 Ga0466972_0022284 3300044658 Bacteria 3155
116 Ga0466972_0116635 3300044658 Bacteria 1260
117 Ga0466965_0022030 3300044683 Bacteria 3071
118 Ga0466966_0000964 3300044684 Bacteria 18472
119 Ga0466961_0191802 3300044693 Bacteria 1266
120 Ga0466963_0003492 3300044694 Bacteria 9017
121 Ga0466963_0004694 3300044694 Bacteria 7977
122 Ga0466968_0039875 3300044735 Bacteria 1978
123 Ga0466970_0000147 3300044765 Bacteria 32640
124 Ga0466970_0073205 3300044765 Bacteria 1844
125 Ga0466957_0017720 3300044842 Bacteria 4176
126 Ga0466957_0149966 3300044842 Bacteria 1507
127 Ga0466960_0015040 3300044901 Bacteria 3329
128 Ga0466960_0104261 3300044901 Bacteria 1464
129 Ga0466959_0009948 3300045049 Bacteria 6779
130 Ga0495592_0006672 3300046454 Bacteria 8601
131 Ga0495592_0058870 3300046454 Bacteria 2832
132 Ga0495651_0050184 3300046462 Bacteria 3219
133 Ga0495651_0077453 3300046462 Bacteria 2517
134 Ga0495653_0046846 3300046463 Bacteria 3346
135 Ga0495653_0179384 3300046463 Bacteria 1455
136 Ga0495662_0000477 3300046476 Bacteria 18161
137 Ga0495628_0058055 3300046516 Bacteria 3042
138 Ga0495630_0056416 3300046517 Bacteria 2943
139 Ga0495652_0082204 3300046529 Bacteria 2655
140 Ga0495652_0137547 3300046529 Bacteria 1925
141 Ga0495665_0008040 3300046531 Bacteria 5721
142 Ga0495587_0043889 3300046536 Bacteria 2660
143 Ga0495667_0072767 3300046559 Bacteria 2240
144 Ga0495634_0106632 3300046642 Bacteria 1805
145 Ga0495635_0090853 3300046663 Bacteria 2088
146 Ga0495599_0049703 3300046678 Bacteria 2628
147 Ga0495600_0029839 3300046809 Bacteria 3532
148 Ga0495581_0107105 3300047315 Bacteria 1625
149 Ga0495604_0001915 3300047317 Bacteria 16858
150 Ga0495604_0008521 3300047317 Bacteria 8096
151 Ga0495604_0053091 3300047317 Bacteria 3135
152 Ga0495674_0247648 3300047319 Bacteria 1467
153 Ga0495675_0008143 3300047444 Bacteria 6487
154 Ga0495675_0019320 3300047444 Bacteria 4328
155 Ga0495684_0008584 3300047471 Bacteria 7910
156 Ga0495593_0018617 3300047673 Bacteria 3901
157 Ga0495602_0014475 3300048088 Bacteria 8007
158 Ga0495602_0182288 3300048088 Bacteria 1618
159 Ga0496104_0238934 3300048907 Bacteria 1729
160 Ga0496104_0267026 3300048907 Bacteria 1623
161 Ga0496105_0208286 3300048908 Bacteria 1594
162 Ga0496111_0044522 3300048914 Bacteria 3190
163 Ga0496112_0104427 3300048915 Bacteria 2803
164 Ga0496116_0008546 3300048919 Bacteria 8868
165 Ga0496117_0000048 3300048920 Bacteria 295908
166 Ga0496117_0000061 3300048920 Bacteria 258454
167 Ga0496117_0058186 3300048920 Bacteria 2678
168 Ga0496118_0010985 3300048921 Bacteria 8896
169 Ga0496119_0002468 3300048922 Bacteria 20289
170 Ga0496119_0003574 3300048922 Bacteria 16051
171 Ga0496119_0004241 3300048922 Bacteria 14384
172 Ga0496119_0009065 3300048922 Bacteria 8620
173 Ga0496119_0011690 3300048922 Bacteria 7229
174 Ga0496119_0045311 3300048922 Bacteria 2758
175 Ga0496120_0000336 3300048923 Bacteria 78318
176 Ga0496120_0001077 3300048923 Bacteria 35930
177 Ga0496120_0001460 3300048923 Bacteria 28234
178 Ga0496120_0009998 3300048923 Bacteria 6665
179 Ga0496120_0024797 3300048923 Bacteria 3732
180 Ga0496122_0000095 3300048925 Bacteria 200509
181 Ga0496122_0000338 3300048925 Bacteria 101772
182 Ga0496122_0001650 3300048925 Bacteria 34624
183 Ga0496122_0016144 3300048925 Bacteria 7093
184 Ga0496122_0021342 3300048925 Bacteria 5801
185 Ga0496122_0025432 3300048925 Bacteria 5140
186 Ga0496122_0067714 3300048925 Bacteria 2569
187 Ga0496123_0000016 3300048926 Bacteria 424330
188 Ga0496123_0000100 3300048926 Bacteria 170019
189 Ga0496123_0003239 3300048926 Bacteria 18524
190 Ga0496123_0012525 3300048926 Bacteria 7223
191 Ga0496123_0018699 3300048926 Bacteria 5493
192 Ga0496124_0002157 3300048927 Bacteria 26423
193 Ga0496124_0002498 3300048927 Bacteria 23933
194 Ga0496124_0009395 3300048927 Bacteria 10075
195 Ga0496125_0002659 3300048928 Bacteria 22839
196 Ga0496125_0002746 3300048928 Bacteria 22271
197 Ga0496125_0023806 3300048928 Bacteria 5645
198 Ga0496125_0026174 3300048928 Bacteria 5324
199 Ga0496126_0003385 3300048929 Bacteria 20197
200 Ga0496126_0011468 3300048929 Bacteria 9169
201 Ga0496126_0013125 3300048929 Bacteria 8450
202 Ga0501034_0066852 3300049571 Bacteria 3608
203 Ga0501038_0012996 3300049574 Bacteria 7595
204 Ga0501039_0097087 3300049575 Bacteria 2298
205 Ga0501040_0015418 3300049576 Bacteria 5053
206 Ga0501070_0003443 3300049586 Bacteria 13719
207 nmdc:mga09592_22638_c1 3300050508 Bacteria 5187
208 Ga0500616_0000040 3300053153 Bacteria 367604
209 Ga0587084_000015 3300059477 Bacteria 8301
210 Ga0587066_004017 3300059490 Bacteria 1776
211 Ga0587080_007446 3300059503 Bacteria 1538
212 Ga0587082_003269 3300059504 Bacteria 1930
213 Ga0587083_0008511 3300059505 Bacteria 1608
214 Ga0587106_005081 3300059605 Bacteria 1485
215 Ga0587067_008480 3300059640 Bacteria 1503
216 Ga0587072_010793 3300059643 Bacteria 1482
217 Ga0587076_006191 3300059645 Bacteria 1583
218 Ga0587107_003213 3300059652 Bacteria 1564
219 Ga0587071_011256 3300060344 Bacteria 1507
220 Ga0466962_0002109 3300061719 Bacteria 9406

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300037418 Ga0395900_0070170 Ga0395900_0070170_515_1696 379
2 3300044658 Ga0466972_0116635 Ga0466972_0116635_32_1213 380
3 3300047673 Ga0495593_0018617 Ga0495593_0018617_2610_3791 380
4 3300044693 Ga0466961_0191802 Ga0466961_0191802_21_1214 381
5 3300031727 Ga0316576_10011343 Ga0316576_100113432 382
6 3300036712 Ga0316584_0076466 Ga0316584_0076466_685_1941 382
7 3300004800 Ga0058861_11938557 Ga0058861_119385571 383
8 3300013104 Ga0157370_10003894 Ga0157370_100038943 383
9 3300013105 Ga0157369_10015289 Ga0157369_100152897 383
10 3300013308 Ga0157375_10140799 Ga0157375_101407991 383
11 3300020610 Ga0154015_1148387 Ga0154015_11483871 383
12 3300020610 Ga0154015_1654053 Ga0154015_16540532 383
13 3300026142 Ga0207698_10045734 Ga0207698_100457342 383
14 3300037312 Ga0395899_0076995 Ga0395899_0076995_759_1967 383
15 3300037466 Ga0395898_0071846 Ga0395898_0071846_1847_3055 383
16 3300046454 Ga0495592_0058870 Ga0495592_0058870_1630_2820 383
17 3300059505 Ga0587083_0008511 Ga0587083_0008511_362_1570 383
18 3300020078 Ga0206352_10000158 Ga0206352_100001582 384
19 3300020082 Ga0206353_11309367 Ga0206353_113093672 384
20 3300031247 Ga0265340_10005878 Ga0265340_100058784 386
21 3300031247 Ga0265340_10009975 Ga0265340_100099752 386
22 3300046454 Ga0495592_0006672 Ga0495592_0006672_909_2237 386
23 3300046462 Ga0495651_0050184 Ga0495651_0050184_287_1615 386
24 3300046463 Ga0495653_0046846 Ga0495653_0046846_1604_2932 386
25 3300046476 Ga0495662_0000477 Ga0495662_0000477_12198_13526 386
26 3300046517 Ga0495630_0056416 Ga0495630_0056416_1270_2598 386
27 3300046529 Ga0495652_0082204 Ga0495652_0082204_982_2310 386
28 3300046531 Ga0495665_0008040 Ga0495665_0008040_2065_3393 386
29 3300046536 Ga0495587_0043889 Ga0495587_0043889_1270_2598 386
30 3300046642 Ga0495634_0106632 Ga0495634_0106632_63_1391 386
31 3300046663 Ga0495635_0090853 Ga0495635_0090853_287_1615 386
32 3300046678 Ga0495599_0049703 Ga0495599_0049703_1110_2438 386
33 3300046809 Ga0495600_0029839 Ga0495600_0029839_1790_3118 386
34 3300047315 Ga0495581_0107105 Ga0495581_0107105_248_1576 386
35 3300047317 Ga0495604_0008521 Ga0495604_0008521_5126_6454 386
36 3300047471 Ga0495684_0008584 Ga0495684_0008584_4333_5661 386
37 3300048088 Ga0495602_0014475 Ga0495602_0014475_6393_7721 386
38 3300005458 Ga0070681_10103864 Ga0070681_101038642 387
39 3300020069 Ga0197907_11470711 Ga0197907_114707112 387
40 3300020076 Ga0206355_1635741 Ga0206355_16357411 387
41 3300020077 Ga0206351_10154265 Ga0206351_101542651 387
42 3300020078 Ga0206352_11152728 Ga0206352_111527281 387
43 3300020080 Ga0206350_10610390 Ga0206350_106103901 387
44 3300022467 Ga0224712_10005270 Ga0224712_100052703 387
45 3300025949 Ga0207667_10016329 Ga0207667_100163292 387
46 3300035120 Ga0373957_0054186 Ga0373957_0054186_129_1484 387
47 3300046463 Ga0495653_0179384 Ga0495653_0179384_47_1402 387
48 3300048088 Ga0495602_0182288 Ga0495602_0182288_58_1413 387
49 3300059503 Ga0587080_007446 Ga0587080_007446_71_1501 387
50 3300059605 Ga0587106_005081 Ga0587106_005081_23_1453 387
51 3300059640 Ga0587067_008480 Ga0587067_008480_40_1470 387
52 3300059643 Ga0587072_010793 Ga0587072_010793_28_1458 387
53 3300060344 Ga0587071_011256 Ga0587071_011256_39_1469 387
54 3300025929 Ga0207664_10028376 Ga0207664_100283763 388
55 3300044656 Ga0466969_0000444 Ga0466969_0000444_19512_20879 388
56 3300044684 Ga0466966_0000964 Ga0466966_0000964_9554_10921 388
57 3300045049 Ga0466959_0009948 Ga0466959_0009948_2841_4208 388
58 3300048929 Ga0496126_0013125 Ga0496126_0013125_6388_7779 388
59 3300006175 Ga0070712_100046212 Ga0070712_1000462121 389
60 3300037068 Ga0373925_0000043 Ga0373925_0000043_68590_69966 389
61 3300044694 Ga0466963_0004694 Ga0466963_0004694_1480_2871 389
62 3300046462 Ga0495651_0077453 Ga0495651_0077453_60_1451 389
63 3300046516 Ga0495628_0058055 Ga0495628_0058055_1559_2950 389
64 3300046529 Ga0495652_0137547 Ga0495652_0137547_72_1463 389
65 3300047317 Ga0495604_0053091 Ga0495604_0053091_1658_3049 389
66 3300047319 Ga0495674_0247648 Ga0495674_0247648_18_1409 389
67 3300025915 Ga0207693_10034067 Ga0207693_100340673 390
68 3300035398 Ga0316574_0000849 Ga0316574_0000849_247_1524 390
69 3300036712 Ga0316584_0011616 Ga0316584_0011616_908_2185 390
70 3300049576 Ga0501040_0015418 Ga0501040_0015418_40_1377 390
71 3300003579 Ga0007429J51699_1045879 Ga0007429J51699_10458791 391
72 3300009177 Ga0105248_10076870 Ga0105248_100768703 391
73 3300014968 Ga0157379_10008786 Ga0157379_100087863 391
74 3300031691 Ga0316579_10030594 Ga0316579_100305941 392
75 3300031733 Ga0316577_10010427 Ga0316577_100104273 392
76 3300032168 Ga0316593_10001687 Ga0316593_100016874 392
77 3300036712 Ga0316584_0111284 Ga0316584_0111284_170_1579 392
78 3300047444 Ga0495675_0019320 Ga0495675_0019320_2073_3416 392
79 3300009148 Ga0105243_10147523 Ga0105243_101475232 393
80 3300053153 Ga0500616_0000040 Ga0500616_0000040_294645_295967 393
81 iso_pu_bacteria 2643221631 2644174674 394
82 3300005436 Ga0070713_100005188 Ga0070713_10000518810 396
83 3300006028 Ga0070717_10001837 Ga0070717_1000183711 396
84 3300025928 Ga0207700_10052580 Ga0207700_100525802 396
85 3300059645 Ga0587076_006191 Ga0587076_006191_16_1407 396
86 3300044658 Ga0466972_0022284 Ga0466972_0022284_1602_2978 397
87 3300004803 Ga0058862_12678353 Ga0058862_126783531 398
88 3300020069 Ga0197907_10715430 Ga0197907_107154301 398
89 3300025919 Ga0207657_10093695 Ga0207657_100936952 398
90 3300048914 Ga0496111_0044522 Ga0496111_0044522_1806_3152 398
91 3300048919 Ga0496116_0008546 Ga0496116_0008546_5644_6939 398
92 3300048920 Ga0496117_0058186 Ga0496117_0058186_460_1755 398
93 3300048921 Ga0496118_0010985 Ga0496118_0010985_2470_3765 398
94 3300048922 Ga0496119_0004241 Ga0496119_0004241_5509_6804 398
95 3300048923 Ga0496120_0001460 Ga0496120_0001460_5809_7104 398
96 3300048925 Ga0496122_0000338 Ga0496122_0000338_21179_22474 398
97 3300048926 Ga0496123_0000016 Ga0496123_0000016_23735_25030 398
98 3300048927 Ga0496124_0002157 Ga0496124_0002157_13234_14529 398
99 3300048928 Ga0496125_0002746 Ga0496125_0002746_6388_7683 398
100 3300048929 Ga0496126_0011468 Ga0496126_0011468_6716_8011 398
101 3300005563 Ga0068855_100035689 Ga0068855_1000356894 399
102 3300020075 Ga0206349_1653994 Ga0206349_16539941 399
103 3300025909 Ga0207705_10009797 Ga0207705_100097974 399
104 3300025949 Ga0207667_10013659 Ga0207667_100136594 399
105 3300044683 Ga0466965_0022030 Ga0466965_0022030_48_1415 399
106 3300044694 Ga0466963_0003492 Ga0466963_0003492_5270_6637 399
107 3300044842 Ga0466957_0017720 Ga0466957_0017720_798_2165 399
108 3300044901 Ga0466960_0015040 Ga0466960_0015040_690_2057 399
109 3300061719 Ga0466962_0002109 Ga0466962_0002109_4031_5398 399
110 iso_pu_bacteria 2844852863 2844853070 399
111 iso_pu_bacteria 8056037122 8056038346 399
112 iso_pu_bacteria 8057345674 8057346040 399
113 3300003308 Ga0006777J48905_1039903 Ga0006777J48905_10399031 400
114 3300003578 Ga0006562J51391_1003932 Ga0006562J51391_10039328 400
115 3300005563 Ga0068855_100221109 Ga0068855_1002211092 400
116 3300005618 Ga0068864_100011912 Ga0068864_1000119125 400
117 3300005841 Ga0068863_100078198 Ga0068863_1000781982 400
118 3300006175 Ga0070712_100180691 Ga0070712_1001806911 400
119 3300009147 Ga0114129_10002127 Ga0114129_1000212717 400
120 3300013306 Ga0163162_10268423 Ga0163162_102684231 400
121 3300013307 Ga0157372_10163321 Ga0157372_101633211 400
122 3300020070 Ga0206356_10180402 Ga0206356_101804021 400
123 3300020082 Ga0206353_10474132 Ga0206353_104741322 400
124 3300022467 Ga0224712_10054439 Ga0224712_100544391 400
125 3300025915 Ga0207693_10041939 Ga0207693_100419392 400
126 3300025941 Ga0207711_10153411 Ga0207711_101534111 400
127 3300046559 Ga0495667_0072767 Ga0495667_0072767_222_1583 400
128 3300047317 Ga0495604_0001915 Ga0495604_0001915_2385_3746 400
129 3300047444 Ga0495675_0008143 Ga0495675_0008143_3378_4739 400
130 3300048907 Ga0496104_0238934 Ga0496104_0238934_333_1694 400
131 3300048907 Ga0496104_0267026 Ga0496104_0267026_58_1410 400
132 3300048908 Ga0496105_0208286 Ga0496105_0208286_216_1568 400
133 3300048915 Ga0496112_0104427 Ga0496112_0104427_272_1624 400
134 3300050508 nmdc:mga09592_22638_c1 nmdc:mga09592_22638_c1_27_1391 400
135 3300048920 Ga0496117_0000048 Ga0496117_0000048_76892_78217 401
136 3300059490 Ga0587066_004017 Ga0587066_004017_50_1402 401
137 3300028573 Ga0265334_10001511 Ga0265334_100015114 402
138 3300041452 Ga0451793_0176024 Ga0451793_0176024_945_2246 402
139 3300032002 Ga0307416_100087260 Ga0307416_1000872602 403
140 3300048925 Ga0496122_0016144 Ga0496122_0016144_2320_3639 403
141 3300048926 Ga0496123_0018699 Ga0496123_0018699_2091_3410 403
142 3300009036 Ga0105244_10006366 Ga0105244_100063662 405
143 3300009148 Ga0105243_10044776 Ga0105243_100447763 405
144 3300044765 Ga0466970_0000147 Ga0466970_0000147_14888_16213 405
145 3300044842 Ga0466957_0149966 Ga0466957_0149966_120_1445 405
146 3300048925 Ga0496122_0025432 Ga0496122_0025432_2453_3766 406
147 3300048926 Ga0496123_0003239 Ga0496123_0003239_16957_18270 406
148 3300059504 Ga0587082_003269 Ga0587082_003269_27_1358 406
149 3300059652 Ga0587107_003213 Ga0587107_003213_57_1388 406
150 iso_pu_bacteria 2585428157 2588109126 406
151 iso_pu_bacteria 2757320536 2758227006 406
152 iso_pu_bacteria 2773857758 2774381039 406
153 iso_pu_bacteria 2773857759 2774383154 406
154 iso_pu_bacteria 2857720070 2857722425 406
155 iso_pu_bacteria 2904509784 2904511077 406
156 iso_pu_bacteria 2908678064 2908680173 406
157 iso_pu_bacteria 2919069694 2919072374 406
158 iso_pu_bacteria 2919395869 2919397214 406
159 iso_pu_bacteria 2928090899 2928092644 406
160 iso_pu_bacteria 2946033335 2946036642 406
161 iso_pu_bacteria 2974294766 2974296389 406
162 iso_pu_bacteria 2974324384 2974327375 406
163 iso_pu_bacteria 2977228692 2977228995 406
164 iso_pu_bacteria 2977236895 2977237781 406
165 iso_pu_bacteria 2977251589 2977253331 406
166 iso_pu_bacteria 2977264416 2977267661 406
167 iso_pu_bacteria 2984542743 2984544435 406
168 iso_pu_bacteria 2984580707 2984583819 406
169 iso_pu_bacteria 8004212874 8004214882 406
170 iso_pu_bacteria 8016254467 8016256615 406
171 3300025728 Ga0207655_1002145 Ga0207655_100214510 407
172 3300025935 Ga0207709_10094976 Ga0207709_100949762 407
173 iso_pu_bacteria 2643221597 2643995018 407
174 iso_pu_bacteria 2773857763 2774398465 408
175 iso_pu_bacteria 2811994872 2812324264 408
176 iso_pu_bacteria 8045830549 8045834185 408
177 3300009036 Ga0105244_10018241 Ga0105244_100182412 409
178 3300031838 Ga0307518_10071855 Ga0307518_100718552 409
179 3300048922 Ga0496119_0011690 Ga0496119_0011690_3569_4900 409
180 3300048923 Ga0496120_0000336 Ga0496120_0000336_7240_8571 409
181 3300048925 Ga0496122_0021342 Ga0496122_0021342_2480_3811 409
182 3300048928 Ga0496125_0023806 Ga0496125_0023806_3760_5091 409
183 3300049586 Ga0501070_0003443 Ga0501070_0003443_10823_12151 409
184 iso_pu_bacteria 2643221575 2643886467 409
185 3300001979 JGI24740J21852_10020844 JGI24740J21852_100208442 410
186 3300002738 JGI25154J39366_1000619 JGI25154J39366_100061918 410
187 3300003735 Ga0006780_1023901 Ga0006780_10239011 410
188 3300005327 Ga0070658_10023388 Ga0070658_100233882 410
189 3300005335 Ga0070666_10094390 Ga0070666_100943901 410
190 3300005338 Ga0068868_100112710 Ga0068868_1001127101 410
191 3300005577 Ga0068857_100022787 Ga0068857_1000227872 410
192 3300005614 Ga0068856_100012126 Ga0068856_1000121266 410
193 3300005834 Ga0068851_10000022 Ga0068851_1000002223 410
194 3300005841 Ga0068863_100029404 Ga0068863_1000294043 410
195 3300006038 Ga0075365_10002113 Ga0075365_100021135 410
196 3300006186 Ga0075369_10054868 Ga0075369_100548682 410
197 3300009093 Ga0105240_10020500 Ga0105240_100205006 410
198 3300009098 Ga0105245_10031431 Ga0105245_100314312 410
199 3300009101 Ga0105247_10035817 Ga0105247_100358173 410
200 3300009174 Ga0105241_10006908 Ga0105241_100069086 410
201 3300009177 Ga0105248_10019892 Ga0105248_100198924 410
202 3300009545 Ga0105237_10016871 Ga0105237_100168715 410
203 3300009545 Ga0105237_10025939 Ga0105237_100259392 410
204 3300009551 Ga0105238_10019256 Ga0105238_100192564 410
205 3300013104 Ga0157370_10139800 Ga0157370_101398002 410
206 3300013250 Ga0171462_1004 Ga0171462_1004583 410
207 3300013296 Ga0157374_10016310 Ga0157374_100163105 410
208 3300017792 Ga0163161_10141343 Ga0163161_101413431 410
209 3300025246 Ga0209646_1000013 Ga0209646_1000013206 410
210 3300025321 Ga0207656_10000005 Ga0207656_10000005286 410
211 3300025900 Ga0207710_10048682 Ga0207710_100486822 410
212 3300025904 Ga0207647_10042636 Ga0207647_100426362 410
213 3300025909 Ga0207705_10014353 Ga0207705_100143532 410
214 3300025911 Ga0207654_10000001 Ga0207654_10000001835 410
215 3300025913 Ga0207695_10016888 Ga0207695_100168884 410
216 3300025914 Ga0207671_10000016 Ga0207671_10000016174 410
217 3300025914 Ga0207671_10030889 Ga0207671_100308891 410
218 3300025914 Ga0207671_10099177 Ga0207671_100991772 410
219 3300025924 Ga0207694_10000057 Ga0207694_10000057114 410
220 3300025941 Ga0207711_10036280 Ga0207711_100362803 410
221 3300026078 Ga0207702_10023022 Ga0207702_100230223 410
222 3300026088 Ga0207641_10037352 Ga0207641_100373525 410
223 3300026116 Ga0207674_10013981 Ga0207674_100139815 410
224 3300026142 Ga0207698_10005234 Ga0207698_100052347 410
225 3300037418 Ga0395900_0286141 Ga0395900_0286141_43_1413 410
226 3300044735 Ga0466968_0039875 Ga0466968_0039875_117_1529 410
227 3300044765 Ga0466970_0073205 Ga0466970_0073205_40_1452 410
228 3300044901 Ga0466960_0104261 Ga0466960_0104261_55_1392 410
229 3300048920 Ga0496117_0000061 Ga0496117_0000061_84324_85655 410
230 3300048922 Ga0496119_0002468 Ga0496119_0002468_9253_10581 410
231 3300048922 Ga0496119_0003574 Ga0496119_0003574_2432_3772 410
232 3300048922 Ga0496119_0009065 Ga0496119_0009065_6515_7846 410
233 3300048922 Ga0496119_0045311 Ga0496119_0045311_1364_2695 410
234 3300048923 Ga0496120_0001077 Ga0496120_0001077_34180_35511 410
235 3300048923 Ga0496120_0009998 Ga0496120_0009998_2272_3636 410
236 3300048923 Ga0496120_0024797 Ga0496120_0024797_2343_3674 410
237 3300048925 Ga0496122_0000095 Ga0496122_0000095_22026_23390 410
238 3300048925 Ga0496122_0001650 Ga0496122_0001650_28099_29430 410
239 3300048925 Ga0496122_0067714 Ga0496122_0067714_167_1492 410
240 3300048926 Ga0496123_0000100 Ga0496123_0000100_146602_147966 410
241 3300048926 Ga0496123_0012525 Ga0496123_0012525_5856_7187 410
242 3300048927 Ga0496124_0002498 Ga0496124_0002498_14700_16064 410
243 3300048927 Ga0496124_0009395 Ga0496124_0009395_5953_7284 410
244 3300048928 Ga0496125_0002659 Ga0496125_0002659_13409_14740 410
245 3300048928 Ga0496125_0026174 Ga0496125_0026174_3155_4540 410
246 3300048929 Ga0496126_0003385 Ga0496126_0003385_17633_19021 410
247 3300049571 Ga0501034_0066852 Ga0501034_0066852_22_1356 410
248 3300049574 Ga0501038_0012996 Ga0501038_0012996_195_1526 410
249 3300049575 Ga0501039_0097087 Ga0501039_0097087_841_2184 410
250 3300059477 Ga0587084_000015 Ga0587084_000015_163_1497 410

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01547

SBP_bac_1

Bacterial extracellular solute-binding protein

88

397

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
3oo6-assembly2.cif.gz_B crystal structures and biochemical characterization of the bacterial solute receptor acbh reveal an unprecedented exclusive substrate preference for b-d-galactopyranose 0.8321 18 409
3zkl-assembly1.cif.gz_A structure of the xylo-oligosaccharide specific solute binding protein from bifidobacterium animalis subsp. lactis bl-04 in complex with xylotriose 0.8258 20 409
2b3f-assembly3.cif.gz_C thermus thermophilus glucose/galactose binding protein bound with galactose 0.8205 20 409
3oo6-assembly2.cif.gz_B crystal structures and biochemical characterization of the bacterial solute receptor acbh reveal an unprecedented exclusive substrate preference for b-d-galactopyranose 0.8202 18 409
5xpj-assembly1.cif.gz_A crystal structure of periplasmic glucose binding protein ppgbp deletion mutant- del-ppgbp 0.8158 19 409
ID Description Score Start End Superfamily
2b3bA02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.891 122 290 3.40.190.10
5ci5B01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8225 19 117 3.40.190.10
1eljA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8194 18 117 3.40.190.10
5ysdB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.809 19 121 3.40.190.10
3n95B01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8085 20 118 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A7X6EKU2-F1-model_v4 deleted 0.9836 120 237
AF-A0A4S4FWE2-F1-model_v4 Extracellular solute-binding protein 0.979 11 410 GO:0030313
AF-A0A4Y4B514-F1-model_v4 Sugar ABC transporter substrate-binding protein 0.9776 117 407
AF-A0A3D9UBQ4-F1-model_v4 deleted 0.9746 17 410
AF-A0A7X6EKU2-F1-model_v4 deleted 0.9674 120 237

Feature Viewer

pLDDT pTM Quality
89.64 0.84 High
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Predicted Structure (AlphaFold2)

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