F360949

General Info

Members Datasets Scaffolds Average Seq Length
249 161 248 566

Family's Representative Sequence

Representative Sequence 3300042876|Ga0451577_0022845|Ga0451577_0022845_330_2261
Length 629
Sequence MATRRDAPSARKAAKVPVRKSASRTTAGNGSAAGTTPVAPNFSEPAKAGRAASEAAAPAPTIPAAQFAADLSQLPAQGWMEMWQEMGKASMAAPAKMPMVSLAPERLMQLQSDYTRQLASLWTDFFEHPDKITQPIKDNRFADPAWQQNPMSSLLARAYLLNAETMRKMAEAVEADGRTKKRVKFAVDQWVEATAPSNFLALNPRAQKTLLESNGESLKQGIHNLLGDLQKGKISQTDEAAFEVGRNVAASEGAVVFENALMQLIQYKPLTAKVYERPFVMVPPCINKYYILDLQPENSFIRYCVEQGHTVFVVSWKNPHEPEAKMTWDDYLELGPIAAINVAREICGVDKVNALGFCVGGTIIAAALAVMYARGEKPIASLTMLTALLDFEDTGVMDAFVDETHVRMREQTLGKGGIMSGKDLANTFSSLRPNDLVWNYVVANYLEGKQPPPFDLLYWNGDSTNLPGPMYTWYLRNTYLENKLKLPNGVRCCGQPVDIQRIKVPAYVFAAREDHIVPWQAAYASARVLPGTNGKDVRFVLGASGHIAGTINAPAKNKRNYWVTDNAALPADSNAWIANAKEVPGSWWPDFARWLGGFGGTQKPAPKAYGSAKYKPIEPAPGRYVKEKA

Samples

Sample ID Description Type Environment
1 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
2 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
39 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
45 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
46 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
47 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
48 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
49 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
50 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
51 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
53 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
54 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
55 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
56 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
57 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
58 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
61 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
62 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
63 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
64 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
65 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
66 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
67 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
68 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
69 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
70 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
71 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
72 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
73 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
74 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
75 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
76 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
77 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
113 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
114 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
115 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
116 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
117 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
118 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
119 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
120 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
121 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
122 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
123 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
124 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
125 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
126 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
127 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
128 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
129 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
130 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
131 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
132 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
133 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
134 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
135 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
136 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
137 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
138 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
139 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
140 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
141 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
142 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
143 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
144 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
145 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
146 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
148 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
149 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
150 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
151 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
152 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
153 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
154 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
155 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
156 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
157 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
158 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
159 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
160 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
161 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.6
Metatranscriptomes 0
Isolates 0.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.05
Nodule 0
Rhizoplane 5.22
Rhizosphere 80.32
Stem 0
Stem Tuber 0
Unclassified 2.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055524_1003287 3300003775 Bacteria 7910
2 Ga0070676_10023977 3300005328 Bacteria 3433
3 Ga0070676_10044287 3300005328 Bacteria 2589
4 Ga0070690_100010655 3300005330 Bacteria 5356
5 Ga0070670_100020619 3300005331 Bacteria 5669
6 Ga0070670_100020691 3300005331 Bacteria 5660
7 Ga0070670_100020890 3300005331 Bacteria 5631
8 Ga0070670_100034186 3300005331 Bacteria 4375
9 Ga0070666_10097928 3300005335 Bacteria 2019
10 Ga0068868_100023963 3300005338 Bacteria 4626
11 Ga0068868_100029926 3300005338 Bacteria 4173
12 Ga0068868_100124227 3300005338 Bacteria 2107
13 Ga0070661_100007881 3300005344 Bacteria 7355
14 Ga0070668_100018085 3300005347 Bacteria 5287
15 Ga0070668_100049967 3300005347 Bacteria 3218
16 Ga0070669_100008698 3300005353 Bacteria 7242
17 Ga0070675_100002637 3300005354 Bacteria 13478
18 Ga0070675_100009122 3300005354 Bacteria 7703
19 Ga0070671_100038311 3300005355 Bacteria 3979
20 Ga0070671_100119323 3300005355 Bacteria 2219
21 Ga0070673_100109541 3300005364 Bacteria 2288
22 Ga0070688_100015759 3300005365 Bacteria 4308
23 Ga0070667_100054578 3300005367 Bacteria 3374
24 Ga0070667_100097585 3300005367 Bacteria 2535
25 Ga0070713_100042724 3300005436 Bacteria 3701
26 Ga0070701_10025416 3300005438 Bacteria 2876
27 Ga0070700_100008765 3300005441 Bacteria 5522
28 Ga0070700_100024002 3300005441 Bacteria 3574
29 Ga0070700_100073787 3300005441 Bacteria 2184
30 Ga0070708_100000218 3300005445 Bacteria 42697
31 Ga0070678_100031328 3300005456 Bacteria 3667
32 Ga0070662_100021597 3300005457 Bacteria 4397
33 Ga0070662_100087770 3300005457 Bacteria 2329
34 Ga0070681_10004252 3300005458 Bacteria 13573
35 Ga0068867_100001470 3300005459 Bacteria 16330
36 Ga0068867_100059645 3300005459 Bacteria 2828
37 Ga0068867_100084717 3300005459 Bacteria 2395
38 Ga0068867_100089716 3300005459 Bacteria 2331
39 Ga0070706_100002689 3300005467 Bacteria 17802
40 Ga0070706_100026618 3300005467 Bacteria 5321
41 Ga0070707_100106670 3300005468 Bacteria 2717
42 Ga0070707_100163145 3300005468 Bacteria 2171
43 Ga0070699_100071266 3300005518 Bacteria 3022
44 Ga0070679_100007004 3300005530 Bacteria 10524
45 Ga0070684_100009346 3300005535 Bacteria 7717
46 Ga0070684_100141130 3300005535 Bacteria 2179
47 Ga0070697_100113157 3300005536 Bacteria 2264
48 Ga0068853_100021509 3300005539 Bacteria 5381
49 Ga0068855_100001244 3300005563 Bacteria 31623
50 Ga0068855_100022086 3300005563 Bacteria 7627
51 Ga0068855_100028131 3300005563 Bacteria 6723
52 Ga0068855_100039095 3300005563 Bacteria 5632
53 Ga0070664_100055898 3300005564 Bacteria 3353
54 Ga0068857_100029410 3300005577 Bacteria 4848
55 Ga0068854_100022847 3300005578 Bacteria 4266
56 Ga0068852_100036541 3300005616 Bacteria 4111
57 Ga0068852_100053333 3300005616 Bacteria 3480
58 Ga0068859_100026236 3300005617 Bacteria 5843
59 Ga0068859_100026469 3300005617 Bacteria 5817
60 Ga0068864_100002905 3300005618 Bacteria 14163
61 Ga0068866_10018308 3300005718 Bacteria 3165
62 Ga0068866_10030396 3300005718 Bacteria 2592
63 Ga0068851_10002615 3300005834 Bacteria 7940
64 Ga0068863_100040505 3300005841 Bacteria 4429
65 Ga0068858_100069316 3300005842 Bacteria 3269
66 Ga0068858_100088954 3300005842 Bacteria 2873
67 Ga0068860_100021244 3300005843 Bacteria 6287
68 Ga0068862_100005553 3300005844 Bacteria 10535
69 Ga0068862_100009005 3300005844 Bacteria 8262
70 Ga0075365_10007360 3300006038 Bacteria 6157
71 Ga0075368_10025322 3300006042 Bacteria 2276
72 Ga0075364_10025467 3300006051 Bacteria 3765
73 Ga0075362_10030953 3300006177 Bacteria 2313
74 Ga0075362_10048188 3300006177 Bacteria 1900
75 Ga0075367_10015422 3300006178 Bacteria 4153
76 Ga0075369_10011315 3300006186 Bacteria 3509
77 Ga0075369_10028926 3300006186 Bacteria 2325
78 Ga0075366_10004503 3300006195 Bacteria 7477
79 Ga0075366_10010752 3300006195 Bacteria 5145
80 Ga0075366_10033892 3300006195 Bacteria 3009
81 Ga0097621_100013496 3300006237 Bacteria 6090
82 Ga0075370_10008466 3300006353 Bacteria 5294
83 Ga0075370_10009821 3300006353 Bacteria 4986
84 Ga0075370_10017838 3300006353 Bacteria 3840
85 Ga0068871_100019931 3300006358 Bacteria 5128
86 Ga0068871_100071352 3300006358 Bacteria 2856
87 Ga0075428_100073526 3300006844 Bacteria 3734
88 Ga0075433_10003142 3300006852 Bacteria 12717
89 Ga0075434_100169000 3300006871 Bacteria 2207
90 Ga0075429_100000296 3300006880 Bacteria 35293
91 Ga0068865_100009609 3300006881 Bacteria 6003
92 Ga0068865_100063720 3300006881 Bacteria 2592
93 Ga0097620_100026236 3300006931 Bacteria 5843
94 Ga0097620_100026466 3300006931 Bacteria 5817
95 Ga0105240_10000805 3300009093 Bacteria 56899
96 Ga0105240_10021531 3300009093 Bacteria 8573
97 Ga0105240_10035280 3300009093 Bacteria 6447
98 Ga0105240_10035322 3300009093 Bacteria 6442
99 Ga0105240_10098500 3300009093 Bacteria 3560
100 Ga0105243_10019432 3300009148 Bacteria 5151
101 Ga0105243_10115180 3300009148 Bacteria 2257
102 Ga0105241_10003260 3300009174 Bacteria 12075
103 Ga0105242_10000518 3300009176 Bacteria 30244
104 Ga0105248_10058737 3300009177 Bacteria 4320
105 Ga0105248_10076390 3300009177 Bacteria 3765
106 Ga0105237_10004204 3300009545 Bacteria 16757
107 Ga0105237_10124921 3300009545 Bacteria 2567
108 Ga0105238_10004015 3300009551 Bacteria 14601
109 Ga0105238_10034642 3300009551 Bacteria 5136
110 Ga0105249_10045027 3300009553 Bacteria 4012
111 Ga0105239_10000952 3300010375 Bacteria 40803
112 Ga0105239_10038522 3300010375 Bacteria 5239
113 Ga0157373_10042107 3300013100 Bacteria 3264
114 Ga0157370_10006295 3300013104 Bacteria 13127
115 Ga0157370_10013808 3300013104 Bacteria 8297
116 Ga0157369_10004202 3300013105 Bacteria 17052
117 Ga0163162_10009376 3300013306 Bacteria 9522
118 Ga0163162_10072956 3300013306 Bacteria 3487
119 Ga0163162_10083183 3300013306 Bacteria 3274
120 Ga0163163_10046750 3300014325 Bacteria 4251
121 Ga0157380_10002952 3300014326 Bacteria 11572
122 Ga0157380_10036968 3300014326 Bacteria 3782
123 Ga0157380_10122729 3300014326 Bacteria 2203
124 Ga0157379_10034731 3300014968 Bacteria 4497
125 Ga0213872_10001389 3300021361 Bacteria 15939
126 Ga0207642_10011747 3300025899 Bacteria 3137
127 Ga0207642_10013936 3300025899 Bacteria 2949
128 Ga0207680_10005169 3300025903 Bacteria 6226
129 Ga0207645_10019818 3300025907 Bacteria 4405
130 Ga0207643_10068447 3300025908 Bacteria 2039
131 Ga0207705_10007583 3300025909 Bacteria 7975
132 Ga0207684_10032813 3300025910 Bacteria 4415
133 Ga0207707_10079880 3300025912 Bacteria 2856
134 Ga0207695_10010843 3300025913 Bacteria 11100
135 Ga0207695_10025809 3300025913 Bacteria 6568
136 Ga0207695_10037480 3300025913 Bacteria 5231
137 Ga0207695_10085903 3300025913 Bacteria 3174
138 Ga0207671_10005118 3300025914 Bacteria 12217
139 Ga0207652_10041611 3300025921 Bacteria 3907
140 Ga0207694_10071213 3300025924 Bacteria 2716
141 Ga0207650_10021937 3300025925 Bacteria 4518
142 Ga0207659_10019396 3300025926 Bacteria 4476
143 Ga0207659_10039593 3300025926 Bacteria 3289
144 Ga0207644_10002869 3300025931 Bacteria 11110
145 Ga0207706_10013190 3300025933 Bacteria 7519
146 Ga0207706_10025074 3300025933 Bacteria 5345
147 Ga0207709_10018672 3300025935 Bacteria 3888
148 Ga0207669_10031520 3300025937 Bacteria 2963
149 Ga0207691_10039639 3300025940 Bacteria 4358
150 Ga0207711_10028530 3300025941 Bacteria 4697
151 Ga0207667_10001234 3300025949 Bacteria 32069
152 Ga0207651_10000775 3300025960 Bacteria 13766
153 Ga0207712_10080449 3300025961 Bacteria 2370
154 Ga0207668_10063019 3300025972 Bacteria 2614
155 Ga0207640_10025041 3300025981 Bacteria 3607
156 Ga0207658_10010730 3300025986 Bacteria 6228
157 Ga0207658_10040716 3300025986 Bacteria 3360
158 Ga0207677_10014400 3300026023 Bacteria 4617
159 Ga0207703_10011799 3300026035 Bacteria 6802
160 Ga0207703_10012605 3300026035 Bacteria 6591
161 Ga0207703_10053830 3300026035 Bacteria 3271
162 Ga0207703_10088205 3300026035 Bacteria 2603
163 Ga0207708_10013215 3300026075 Bacteria 6164
164 Ga0207648_10002442 3300026089 Bacteria 19978
165 Ga0207648_10033178 3300026089 Bacteria 4554
166 Ga0207648_10080978 3300026089 Bacteria 2832
167 Ga0207674_10051732 3300026116 Bacteria 4192
168 Ga0207674_10056638 3300026116 Bacteria 3979
169 Ga0207675_100062773 3300026118 Bacteria 3471
170 Ga0207683_10157269 3300026121 Bacteria 2053
171 Ga0207698_10041183 3300026142 Bacteria 3439
172 Ga0207698_10054312 3300026142 Bacteria 3082
173 Ga0207698_10072118 3300026142 Bacteria 2744
174 Ga0207698_10173572 3300026142 Bacteria 1901
175 Ga0268265_10010360 3300028380 Bacteria 6296
176 Ga0268265_10030084 3300028380 Bacteria 3906
177 Ga0268265_10104453 3300028380 Bacteria 2296
178 Ga0268264_10008168 3300028381 Bacteria 8696
179 Ga0268264_10010106 3300028381 Bacteria 7809
180 Ga0268264_10110352 3300028381 Bacteria 2408
181 Ga0268264_10111489 3300028381 Bacteria 2397
182 Ga0307515_10011678 3300028794 Bacteria 16633
183 Ga0265339_10032823 3300031249 Bacteria 2927
184 Ga0307508_10050014 3300031616 Bacteria 3720
185 Ga0307405_10009004 3300031731 Bacteria 5098
186 Ga0307409_100035133 3300031995 Bacteria 3669
187 Ga0307416_100126885 3300032002 Bacteria 2287
188 Ga0373935_0068665 3300035692 Bacteria 2281
189 Ga0373937_0076761 3300036401 Bacteria 3086
190 Ga0373937_0079933 3300036401 Bacteria 3023
191 Ga0395900_0042420 3300037418 Bacteria 4689
192 Ga0436365_0678804 3300039437 Bacteria 7212
193 Ga0436361_0102726 3300039447 Bacteria 10488
194 Ga0436361_0148492 3300039447 Bacteria 10939
195 Ga0436361_0171991 3300039447 Bacteria 22424
196 Ga0451577_0007686 3300042876 Bacteria 10576
197 Ga0451577_0022845 3300042876 Bacteria 5709
198 Ga0453684_0161842 3300044712 Bacteria 2646
199 Ga0451576_0000974 3300045051 Bacteria 53257
200 Ga0495650_0002997 3300046471 Bacteria 12777
201 Ga0495620_0022350 3300046515 Bacteria 3047
202 Ga0495632_0011199 3300046519 Bacteria 5251
203 Ga0495643_0024357 3300046522 Bacteria 3434
204 Ga0495645_0091184 3300046543 Bacteria 2177
205 Ga0495625_0003328 3300046660 Bacteria 16189
206 Ga0495625_0009160 3300046660 Bacteria 8321
207 Ga0495649_0013588 3300046694 Bacteria 4693
208 Ga0495687_000799 3300047443 Bacteria 33916
209 Ga0495687_011558 3300047443 Bacteria 4735
210 Ga0496102_0002411 3300048905 Bacteria 15962
211 Ga0496102_0006804 3300048905 Bacteria 9756
212 Ga0496104_0004871 3300048907 Bacteria 11702
213 Ga0496105_0000753 3300048908 Bacteria 21968
214 Ga0496106_0077445 3300048909 Bacteria 2550
215 Ga0496109_0000964 3300048912 Bacteria 23743
216 Ga0496110_0002611 3300048913 Bacteria 13559
217 Ga0496110_0020889 3300048913 Bacteria 5531
218 Ga0496111_0002311 3300048914 Bacteria 11467
219 Ga0496113_0059120 3300048916 Bacteria 2887
220 Ga0496114_0022504 3300048917 Bacteria 5138
221 Ga0496114_0035550 3300048917 Bacteria 4114
222 Ga0496114_0129438 3300048917 Bacteria 2178
223 Ga0496121_0038268 3300048924 Bacteria 4251
224 Ga0496125_0104120 3300048928 Bacteria 2080
225 Ga0496126_0023512 3300048929 Bacteria 5971
226 Ga0501047_0025353 3300049581 Bacteria 5699
227 Ga0501069_0003960 3300049585 Bacteria 7638
228 Ga0501073_0009355 3300049589 Bacteria 7230
229 Ga0501074_0003023 3300049590 Bacteria 11847
230 Ga0501080_0076072 3300049742 Bacteria 3122
231 Ga0501083_0001015 3300049744 Bacteria 18712
232 Ga0501044_0208971 3300049823 Bacteria 1907
233 nmdc:mga00v17_28598_c1 3300050491 Bacteria 3265
234 nmdc:mga0k408_11790_c1 3300050493 Bacteria 4769
235 nmdc:mga0k408_18016_c1 3300050493 Bacteria 3937
236 nmdc:mga0k408_32473_c1 3300050493 Bacteria 2983
237 nmdc:mga0k408_36349_c1 3300050493 Bacteria 2827
238 nmdc:mga0k408_41371_c1 3300050493 Bacteria 2653
239 nmdc:mga0k408_6570_c1 3300050493 Bacteria 6195
240 nmdc:mga0k408_835_c1 3300050493 Bacteria 16983
241 nmdc:mga06z11_4334_c1 3300050494 Bacteria 5578
242 nmdc:mga07m45_692_c1 3300050496 Bacteria 14325
243 nmdc:mga07m45_897_c1 3300050496 Bacteria 12986
244 nmdc:mga09592_436_c1 3300050508 Bacteria 30720
245 nmdc:mga0sz30_10745_c1 3300050516 Bacteria 3514
246 Ga0500593_000092 3300053117 Bacteria 33302
247 Ga0500658_0018062 3300053134 Bacteria 2641
248 Ga0500619_000129 3300053154 Bacteria 19684

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025933 Ga0207706_10025074 Ga0207706_100250742 516
2 3300005436 Ga0070713_100042724 Ga0070713_1000427242 519
3 3300005518 Ga0070699_100071266 Ga0070699_1000712662 519
4 3300025912 Ga0207707_10079880 Ga0207707_100798802 519
5 3300006195 Ga0075366_10010752 Ga0075366_100107522 526
6 3300009148 Ga0105243_10115180 Ga0105243_101151802 531
7 3300048905 Ga0496102_0006804 Ga0496102_0006804_1846_3648 532
8 3300050493 nmdc:mga0k408_41371_c1 nmdc:mga0k408_41371_c1_466_2085 532
9 3300050516 nmdc:mga0sz30_10745_c1 nmdc:mga0sz30_10745_c1_675_2294 532
10 3300005335 Ga0070666_10097928 Ga0070666_100979281 533
11 3300005338 Ga0068868_100029926 Ga0068868_1000299262 533
12 3300005354 Ga0070675_100009122 Ga0070675_1000091227 533
13 3300005355 Ga0070671_100038311 Ga0070671_1000383112 533
14 3300005365 Ga0070688_100015759 Ga0070688_1000157592 533
15 3300005367 Ga0070667_100054578 Ga0070667_1000545782 533
16 3300005441 Ga0070700_100073787 Ga0070700_1000737872 533
17 3300005459 Ga0068867_100089716 Ga0068867_1000897162 533
18 3300005617 Ga0068859_100026469 Ga0068859_1000264696 533
19 3300005841 Ga0068863_100040505 Ga0068863_1000405056 533
20 3300006931 Ga0097620_100026466 Ga0097620_1000264666 533
21 3300009093 Ga0105240_10021531 Ga0105240_100215313 533
22 3300009545 Ga0105237_10124921 Ga0105237_101249212 533
23 3300013104 Ga0157370_10006295 Ga0157370_100062956 533
24 3300013306 Ga0163162_10072956 Ga0163162_100729562 533
25 3300014325 Ga0163163_10046750 Ga0163163_100467505 533
26 3300014968 Ga0157379_10034731 Ga0157379_100347315 533
27 3300025903 Ga0207680_10005169 Ga0207680_100051692 533
28 3300025907 Ga0207645_10019818 Ga0207645_100198183 533
29 3300025926 Ga0207659_10039593 Ga0207659_100395932 533
30 3300025986 Ga0207658_10040716 Ga0207658_100407163 533
31 3300026035 Ga0207703_10011799 Ga0207703_100117997 533
32 3300048929 Ga0496126_0023512 Ga0496126_0023512_626_2314 535
33 3300031616 Ga0307508_10050014 Ga0307508_100500144 537
34 3300005331 Ga0070670_100020691 Ga0070670_1000206912 538
35 3300005347 Ga0070668_100018085 Ga0070668_1000180853 539
36 3300021361 Ga0213872_10001389 Ga0213872_100013897 541
37 3300039447 Ga0436361_0102726 Ga0436361_0102726_7488_9290 541
38 3300039447 Ga0436361_0148492 Ga0436361_0148492_1759_3501 541
39 3300039447 Ga0436361_0171991 Ga0436361_0171991_15965_17707 541
40 3300005328 Ga0070676_10044287 Ga0070676_100442872 543
41 3300005330 Ga0070690_100010655 Ga0070690_1000106557 543
42 3300005347 Ga0070668_100049967 Ga0070668_1000499674 543
43 3300005456 Ga0070678_100031328 Ga0070678_1000313282 543
44 3300005457 Ga0070662_100087770 Ga0070662_1000877703 543
45 3300005618 Ga0068864_100002905 Ga0068864_1000029052 543
46 3300006881 Ga0068865_100063720 Ga0068865_1000637203 543
47 3300025940 Ga0207691_10039639 Ga0207691_100396395 543
48 3300025960 Ga0207651_10000775 Ga0207651_100007752 543
49 3300026023 Ga0207677_10014400 Ga0207677_100144002 543
50 3300026118 Ga0207675_100062773 Ga0207675_1000627732 543
51 3300026121 Ga0207683_10157269 Ga0207683_101572692 543
52 3300048909 Ga0496106_0077445 Ga0496106_0077445_884_2524 543
53 3300048917 Ga0496114_0129438 Ga0496114_0129438_77_1717 543
54 3300005331 Ga0070670_100020890 Ga0070670_1000208905 544
55 3300009176 Ga0105242_10000518 Ga0105242_1000051810 544
56 3300013306 Ga0163162_10083183 Ga0163162_100831832 544
57 3300025925 Ga0207650_10021937 Ga0207650_100219373 544
58 3300005617 Ga0068859_100026236 Ga0068859_1000262364 545
59 3300006931 Ga0097620_100026236 Ga0097620_1000262364 545
60 3300028381 Ga0268264_10111489 Ga0268264_101114892 545
61 3300005467 Ga0070706_100002689 Ga0070706_10000268910 546
62 3300005468 Ga0070707_100163145 Ga0070707_1001631451 546
63 3300006186 Ga0075369_10011315 Ga0075369_100113153 546
64 3300006195 Ga0075366_10004503 Ga0075366_100045032 546
65 3300006195 Ga0075366_10033892 Ga0075366_100338921 546
66 3300006353 Ga0075370_10008466 Ga0075370_100084667 546
67 3300025910 Ga0207684_10032813 Ga0207684_100328135 546
68 3300050493 nmdc:mga0k408_36349_c1 nmdc:mga0k408_36349_c1_822_2543 546
69 3300053117 Ga0500593_000092 Ga0500593_000092_19980_21791 546
70 3300006844 Ga0075428_100073526 Ga0075428_1000735262 547
71 3300036401 Ga0373937_0076761 Ga0373937_0076761_540_2213 548
72 3300005467 Ga0070706_100026618 Ga0070706_1000266183 549
73 3300005468 Ga0070707_100106670 Ga0070707_1001066701 549
74 3300005536 Ga0070697_100113157 Ga0070697_1001131572 549
75 3300005842 Ga0068858_100088954 Ga0068858_1000889542 549
76 3300026035 Ga0207703_10053830 Ga0207703_100538302 549
77 3300046543 Ga0495645_0091184 Ga0495645_0091184_256_1953 549
78 3300048905 Ga0496102_0002411 Ga0496102_0002411_308_2014 549
79 3300048907 Ga0496104_0004871 Ga0496104_0004871_719_2416 549
80 3300048908 Ga0496105_0000753 Ga0496105_0000753_12440_14146 549
81 3300048912 Ga0496109_0000964 Ga0496109_0000964_7486_9192 549
82 3300048913 Ga0496110_0020889 Ga0496110_0020889_1514_3211 549
83 3300048914 Ga0496111_0002311 Ga0496111_0002311_7622_9328 549
84 3300048916 Ga0496113_0059120 Ga0496113_0059120_317_2023 549
85 3300048917 Ga0496114_0022504 Ga0496114_0022504_215_1912 549
86 3300048917 Ga0496114_0035550 Ga0496114_0035550_1438_3303 549
87 3300048924 Ga0496121_0038268 Ga0496121_0038268_784_2439 549
88 3300005331 Ga0070670_100034186 Ga0070670_1000341864 552
89 3300050493 nmdc:mga0k408_18016_c1 nmdc:mga0k408_18016_c1_1844_3541 554
90 3300005367 Ga0070667_100097585 Ga0070667_1000975852 555
91 3300044712 Ga0453684_0161842 Ga0453684_0161842_584_2464 555
92 3300005459 Ga0068867_100059645 Ga0068867_1000596452 558
93 3300006177 Ga0075362_10048188 Ga0075362_100481881 558
94 3300026089 Ga0207648_10080978 Ga0207648_100809783 558
95 3300050493 nmdc:mga0k408_32473_c1 nmdc:mga0k408_32473_c1_842_2551 558
96 3300005331 Ga0070670_100020619 Ga0070670_1000206194 559
97 3300005844 Ga0068862_100005553 Ga0068862_1000055538 559
98 3300006871 Ga0075434_100169000 Ga0075434_1001690002 559
99 3300028380 Ga0268265_10010360 Ga0268265_100103603 559
100 3300006880 Ga0075429_100000296 Ga0075429_10000029624 560
101 3300050508 nmdc:mga09592_436_c1 nmdc:mga09592_436_c1_7283_8995 560
102 3300005445 Ga0070708_100000218 Ga0070708_10000021831 561
103 3300005328 Ga0070676_10023977 Ga0070676_100239772 563
104 3300005344 Ga0070661_100007881 Ga0070661_1000078816 563
105 3300005355 Ga0070671_100119323 Ga0070671_1001193231 563
106 3300005364 Ga0070673_100109541 Ga0070673_1001095412 563
107 3300005441 Ga0070700_100024002 Ga0070700_1000240022 563
108 3300005457 Ga0070662_100021597 Ga0070662_1000215975 563
109 3300005458 Ga0070681_10004252 Ga0070681_100042526 563
110 3300005459 Ga0068867_100084717 Ga0068867_1000847172 563
111 3300005535 Ga0070684_100009346 Ga0070684_1000093466 563
112 3300005564 Ga0070664_100055898 Ga0070664_1000558982 563
113 3300005577 Ga0068857_100029410 Ga0068857_1000294105 563
114 3300005578 Ga0068854_100022847 Ga0068854_1000228472 563
115 3300005616 Ga0068852_100036541 Ga0068852_1000365412 563
116 3300005718 Ga0068866_10030396 Ga0068866_100303962 563
117 3300005834 Ga0068851_10002615 Ga0068851_100026153 563
118 3300005844 Ga0068862_100009005 Ga0068862_1000090056 563
119 3300006358 Ga0068871_100071352 Ga0068871_1000713522 563
120 3300009148 Ga0105243_10019432 Ga0105243_100194326 563
121 3300009177 Ga0105248_10076390 Ga0105248_100763902 563
122 3300013100 Ga0157373_10042107 Ga0157373_100421072 563
123 3300014326 Ga0157380_10002952 Ga0157380_100029525 563
124 3300014326 Ga0157380_10122729 Ga0157380_101227292 563
125 3300025899 Ga0207642_10013936 Ga0207642_100139363 563
126 3300025908 Ga0207643_10068447 Ga0207643_100684472 563
127 3300025931 Ga0207644_10002869 Ga0207644_100028696 563
128 3300025935 Ga0207709_10018672 Ga0207709_100186723 563
129 3300025937 Ga0207669_10031520 Ga0207669_100315203 563
130 3300025941 Ga0207711_10028530 Ga0207711_100285305 563
131 3300025981 Ga0207640_10025041 Ga0207640_100250412 563
132 3300025986 Ga0207658_10010730 Ga0207658_100107305 563
133 3300026035 Ga0207703_10012605 Ga0207703_100126052 563
134 3300026089 Ga0207648_10033178 Ga0207648_100331785 563
135 3300026116 Ga0207674_10056638 Ga0207674_100566382 563
136 3300026142 Ga0207698_10041183 Ga0207698_100411832 563
137 3300028380 Ga0268265_10030084 Ga0268265_100300843 563
138 3300028381 Ga0268264_10010106 Ga0268264_100101065 563
139 3300031731 Ga0307405_10009004 Ga0307405_100090042 563
140 3300031995 Ga0307409_100035133 Ga0307409_1000351332 563
141 3300035692 Ga0373935_0068665 Ga0373935_0068665_155_1885 563
142 3300036401 Ga0373937_0079933 Ga0373937_0079933_1128_2951 563
143 iso_pu_bacteria 2585428062 2587755807 563
144 3300005353 Ga0070669_100008698 Ga0070669_1000086987 564
145 3300005354 Ga0070675_100002637 Ga0070675_1000026378 564
146 3300005441 Ga0070700_100008765 Ga0070700_1000087652 564
147 3300005459 Ga0068867_100001470 Ga0068867_1000014702 564
148 3300005563 Ga0068855_100022086 Ga0068855_1000220866 564
149 3300005563 Ga0068855_100039095 Ga0068855_1000390953 564
150 3300005718 Ga0068866_10018308 Ga0068866_100183083 564
151 3300005842 Ga0068858_100069316 Ga0068858_1000693161 564
152 3300005843 Ga0068860_100021244 Ga0068860_1000212444 564
153 3300006353 Ga0075370_10017838 Ga0075370_100178383 564
154 3300006881 Ga0068865_100009609 Ga0068865_1000096097 564
155 3300009174 Ga0105241_10003260 Ga0105241_100032602 564
156 3300009553 Ga0105249_10045027 Ga0105249_100450274 564
157 3300013104 Ga0157370_10013808 Ga0157370_100138082 564
158 3300013306 Ga0163162_10009376 Ga0163162_100093764 564
159 3300014326 Ga0157380_10036968 Ga0157380_100369683 564
160 3300025899 Ga0207642_10011747 Ga0207642_100117472 564
161 3300025926 Ga0207659_10019396 Ga0207659_100193963 564
162 3300025961 Ga0207712_10080449 Ga0207712_100804491 564
163 3300026035 Ga0207703_10088205 Ga0207703_100882051 564
164 3300026075 Ga0207708_10013215 Ga0207708_100132153 564
165 3300026089 Ga0207648_10002442 Ga0207648_100024422 564
166 3300028380 Ga0268265_10104453 Ga0268265_101044531 564
167 3300028381 Ga0268264_10008168 Ga0268264_100081686 564
168 3300032002 Ga0307416_100126885 Ga0307416_1001268852 564
169 3300050496 nmdc:mga07m45_897_c1 nmdc:mga07m45_897_c1_2054_3748 564
170 3300005338 Ga0068868_100023963 Ga0068868_1000239632 565
171 3300005338 Ga0068868_100124227 Ga0068868_1001242271 565
172 3300005438 Ga0070701_10025416 Ga0070701_100254162 565
173 3300005539 Ga0068853_100021509 Ga0068853_1000215096 565
174 3300005563 Ga0068855_100001244 Ga0068855_10000124419 565
175 3300006038 Ga0075365_10007360 Ga0075365_100073602 565
176 3300006042 Ga0075368_10025322 Ga0075368_100253222 565
177 3300006051 Ga0075364_10025467 Ga0075364_100254673 565
178 3300006177 Ga0075362_10030953 Ga0075362_100309532 565
179 3300006178 Ga0075367_10015422 Ga0075367_100154222 565
180 3300006186 Ga0075369_10028926 Ga0075369_100289262 565
181 3300006237 Ga0097621_100013496 Ga0097621_1000134966 565
182 3300006353 Ga0075370_10009821 Ga0075370_100098214 565
183 3300006358 Ga0068871_100019931 Ga0068871_1000199314 565
184 3300006852 Ga0075433_10003142 Ga0075433_1000314210 565
185 3300009093 Ga0105240_10000805 Ga0105240_100008056 565
186 3300009093 Ga0105240_10035280 Ga0105240_100352805 565
187 3300009093 Ga0105240_10035322 Ga0105240_100353222 565
188 3300009093 Ga0105240_10098500 Ga0105240_100985002 565
189 3300009177 Ga0105248_10058737 Ga0105248_100587374 565
190 3300009545 Ga0105237_10004204 Ga0105237_100042042 565
191 3300009551 Ga0105238_10004015 Ga0105238_100040153 565
192 3300010375 Ga0105239_10000952 Ga0105239_100009522 565
193 3300010375 Ga0105239_10038522 Ga0105239_100385224 565
194 3300025913 Ga0207695_10010843 Ga0207695_100108434 565
195 3300025913 Ga0207695_10025809 Ga0207695_100258091 565
196 3300025913 Ga0207695_10085903 Ga0207695_100859033 565
197 3300025914 Ga0207671_10005118 Ga0207671_100051188 565
198 3300025924 Ga0207694_10071213 Ga0207694_100712133 565
199 3300025933 Ga0207706_10013190 Ga0207706_100131907 565
200 3300025949 Ga0207667_10001234 Ga0207667_100012345 565
201 3300025972 Ga0207668_10063019 Ga0207668_100630192 565
202 3300026116 Ga0207674_10051732 Ga0207674_100517323 565
203 3300026142 Ga0207698_10173572 Ga0207698_101735722 565
204 3300031249 Ga0265339_10032823 Ga0265339_100328233 565
205 3300046660 Ga0495625_0009160 Ga0495625_0009160_3750_5447 565
206 3300046694 Ga0495649_0013588 Ga0495649_0013588_498_2195 565
207 3300047443 Ga0495687_000799 Ga0495687_000799_1561_3258 565
208 3300047443 Ga0495687_011558 Ga0495687_011558_268_1965 565
209 3300048913 Ga0496110_0002611 Ga0496110_0002611_4465_6192 565
210 3300048928 Ga0496125_0104120 Ga0496125_0104120_136_1845 565
211 3300049581 Ga0501047_0025353 Ga0501047_0025353_584_2344 565
212 3300049585 Ga0501069_0003960 Ga0501069_0003960_2868_4628 565
213 3300049589 Ga0501073_0009355 Ga0501073_0009355_1441_3201 565
214 3300049590 Ga0501074_0003023 Ga0501074_0003023_1920_3680 565
215 3300049742 Ga0501080_0076072 Ga0501080_0076072_116_1876 565
216 3300049744 Ga0501083_0001015 Ga0501083_0001015_743_2503 565
217 3300049823 Ga0501044_0208971 Ga0501044_0208971_129_1889 565
218 3300050491 nmdc:mga00v17_28598_c1 nmdc:mga00v17_28598_c1_338_2035 565
219 3300050493 nmdc:mga0k408_835_c1 nmdc:mga0k408_835_c1_7511_9208 565
220 3300050494 nmdc:mga06z11_4334_c1 nmdc:mga06z11_4334_c1_165_1862 565
221 3300050496 nmdc:mga07m45_692_c1 nmdc:mga07m45_692_c1_7512_9209 565
222 3300053134 Ga0500658_0018062 Ga0500658_0018062_551_2248 565
223 3300005530 Ga0070679_100007004 Ga0070679_1000070041 567
224 3300005535 Ga0070684_100141130 Ga0070684_1001411302 567
225 3300005563 Ga0068855_100028131 Ga0068855_1000281316 567
226 3300005616 Ga0068852_100053333 Ga0068852_1000533332 567
227 3300009551 Ga0105238_10034642 Ga0105238_100346427 567
228 3300013105 Ga0157369_10004202 Ga0157369_1000420210 567
229 3300025909 Ga0207705_10007583 Ga0207705_100075834 567
230 3300025913 Ga0207695_10037480 Ga0207695_100374804 567
231 3300025921 Ga0207652_10041611 Ga0207652_100416111 567
232 3300026142 Ga0207698_10054312 Ga0207698_100543123 567
233 3300026142 Ga0207698_10072118 Ga0207698_100721182 567
234 3300028381 Ga0268264_10110352 Ga0268264_101103522 567
235 3300028794 Ga0307515_10011678 Ga0307515_100116789 567
236 3300037418 Ga0395900_0042420 Ga0395900_0042420_1733_3487 567
237 3300046471 Ga0495650_0002997 Ga0495650_0002997_1384_3099 567
238 3300046515 Ga0495620_0022350 Ga0495620_0022350_169_1884 567
239 3300046519 Ga0495632_0011199 Ga0495632_0011199_776_2491 567
240 3300046522 Ga0495643_0024357 Ga0495643_0024357_1479_3194 567
241 3300046660 Ga0495625_0003328 Ga0495625_0003328_10614_12329 567
242 3300039437 Ga0436365_0678804 Ga0436365_0678804_3194_4945 568
243 3300053154 Ga0500619_000129 Ga0500619_000129_17701_19440 568
244 3300050493 nmdc:mga0k408_6570_c1 nmdc:mga0k408_6570_c1_4369_6108 569
245 3300042876 Ga0451577_0007686 Ga0451577_0007686_3468_5414 570
246 3300042876 Ga0451577_0022845 Ga0451577_0022845_330_2261 570
247 3300045051 Ga0451576_0000974 Ga0451576_0000974_40285_42231 570
248 3300050493 nmdc:mga0k408_11790_c1 nmdc:mga0k408_11790_c1_1687_3429 570
249 3300003775 Ga0055524_1003287 Ga0055524_10032873 579

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07167

PhaC_N

Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus

137

304

0.99

PF00561

Abhydrolase_1

alpha/beta hydrolase fold

278

549

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
5xav-assembly1.cif.gz_B structure of phac from chromobacterium sp. usm2 0.9475 191 578
5xav-assembly1.cif.gz_A structure of phac from chromobacterium sp. usm2 0.9466 191 578
5xav-assembly1.cif.gz_B structure of phac from chromobacterium sp. usm2 0.9305 191 578
5xav-assembly1.cif.gz_A structure of phac from chromobacterium sp. usm2 0.9295 191 578
6k3c-assembly1.cif.gz_A crystal structure of class i pha synthase (phac) mutant from chromobacterium sp. usm2 bound to coenzyme a. 0.9258 191 579
ID Description Score Start End Superfamily
af_Q55EU9_25_358_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.7584 201 360 3.40.50.1820
af_Q9UT29_165_337_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.742 213 336 3.40.50.1820
af_O33185_49_361_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.7391 211 546 3.40.50.1820
af_O33185_49_361_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.7324 211 546 3.40.50.1820
af_Q8VYT1_50_250_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.7227 211 503 3.40.50.1820
ID Description Score Start End GO Terms
AF-A0A3B8W951-F1-model_v4 Class I poly(R)-hydroxyalkanoic acid synthase 0.9872 202 349 GO:0016746
GO:0042619
AF-A0A2U8UAN2-F1-model_v4 PhaC 0.9841 177 318 GO:0016746
GO:0042619
AF-A0A3D3CZH2-F1-model_v4 deleted 0.9826 412 579
AF-A0A540WHS3-F1-model_v4 Alpha/beta fold hydrolase 0.9824 181 362 GO:0016746
GO:0016787
GO:0042619
AF-A0A3B8W951-F1-model_v4 Class I poly(R)-hydroxyalkanoic acid synthase 0.9806 202 349 GO:0016746
GO:0042619

Feature Viewer

pLDDT pTM Quality
82.38 0.8 High
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Predicted Structure (AlphaFold2)

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