F359434

General Info

Members Datasets Scaffolds Average Seq Length
247 216 195 326

Family's Representative Sequence

Representative Sequence 3300053119|Ga0500595_027879|Ga0500595_027879_380_1498
Length 372
Sequence MLGADGLAVELLTADDIAPSTITWGVARMRLLILGGTQFLGRAIAAHASARGDDVTCAARGVTGMVPDGVRFIRVDRDEPDGLAPLVGEAFDAVVDVSRHPGQVRRAVAALKPRVAHWTFVSTVSVYADVSTIGQRADTAPIRAPTAPEIEHSTEETYGAAKVACEQAIGESAFICRAGLIVGPEDPTGRFTYWPARLARGGEVLVAGTPDDAVQLIDVRDLARWIVHAAQTGLTGYFDGIGPTYTRGQFLAKCADGVGAGCAFTWVDRAFLESQNIKRWAGPRSLPLWLPLPDYAGFNTRDTSPAREAGLTVRALSATARDTLSWARSAGGAVTGLTADEERAALQAWHASRSEGDGGERAAARPSAVPCK

Samples

Sample ID Description Type Environment
1 2513237095 Bradyrhizobium diazoefficiens USDA 122 Isolate Nodule
2 2513237139 Bradyrhizobium ottawaense USDA 4 Isolate Nodule
3 2517093001 Bradyrhizobium japonicum USDA 124 Isolate Nodule
4 2524023205 Bradyrhizobium sp. Cp5.3 Isolate Nodule
5 2558860280 Kutzneria sp. 744 Isolate Unclassified
6 2617270735 Bradyrhizobium shewense ERR11 Isolate Nodule
7 2617270741 Bradyrhizobium yuanmingense CCBAU 10071 Isolate Nodule
8 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
9 2744054633 Bradyrhizobium neotropicale BR 10247 Isolate Unclassified
10 2802429603 Bradyrhizobium ottawaense L2 Isolate Nodule
11 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
12 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
13 2816332527 Bradyrhizobium diazoefficiens Y21 Isolate Nodule
14 2824626560 Bradyrhizobium sp. HAMBI 2149 Isolate Unclassified
15 2824635225 Bradyrhizobium sp. HAMBI 2136 Isolate Unclassified
16 2824671348 Bradyrhizobium sp. HAMBI 2125 Isolate Unclassified
17 2824679649 Bradyrhizobium sp.HAMBI 2116 Isolate Unclassified
18 2824687955 Bradyrhizobium sp. HAMBI 2126 Isolate Unclassified
19 2824723954 Bradyrhizobium sp. HAMBI 2152 Isolate Unclassified
20 2824732956 Bradyrhizobium sp. HAMBI 2153 Isolate Unclassified
21 2824773399 Bradyrhizobium sp. HAMBI 2130 Isolate Unclassified
22 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
23 2838122688 Bradyrhizobium sp. CIR3A Isolate Nodule
24 2841941048 Bradyrhizobium sp. SBR1B Isolate Nodule
25 2841949485 Bradyrhizobium sp. ERR14 Isolate Nodule
26 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
27 2841966195 Bradyrhizobium sp. CIR18 Isolate Nodule
28 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
29 2841983080 Bradyrhizobium sp. IAR9 Isolate Nodule
30 2847939898 Bradyrhizobium ottawaense OO99 Isolate Unclassified
31 2857509624 Bradyrhizobium sp. R-73088 Isolate Unclassified
32 2876761206 Bradyrhizobium centrolobii BR 10245 Isolate Nodule
33 2879083081 Bradyrhizobium zhanjiangense CCBAU 51787 Isolate Unclassified
34 2881364244 Bradyrhizobium sp. RP6 Isolate Unclassified
35 2888378607 Bradyrhizobium sp. LCT2 Isolate Unclassified
36 2908775508 Bradyrhizobium sp. SUTN9-2 Isolate Unclassified
37 2922393267 Bradyrhizobium sp. WBAH10 Isolate Nodule
38 2929615660 Bradyrhizobium japonicum TXVA Isolate Nodule
39 2929624759 Bradyrhizobium japonicum TXEA Isolate Nodule
40 2933577622 Bradyrhizobium japonicum SEMIA 417 Isolate Nodule
41 2935684952 Bradyrhizobium sp. LA3.X Isolate Nodule
42 2935713505 Bradyrhizobium sp. LA6.12 Isolate Nodule
43 2935722832 Bradyrhizobium sp. LA6.3 Isolate Nodule
44 2935732158 Bradyrhizobium sp. LA6.4 Isolate Nodule
45 2935741537 Bradyrhizobium sp. LA6.7 Isolate Nodule
46 2935750917 Bradyrhizobium sp. LA6.8 Isolate Nodule
47 2940556831 Bradyrhizobium sp. LA8.1 Isolate Nodule
48 3001889506 Janibacter sp. YIM B02568 Isolate Unclassified
49 3005483717 Bradyrhizobium agreste CNPSo 4010 Isolate Unclassified
50 3005506211 Bradyrhizobium diazoefficiens SZCCT0449 Isolate Unclassified
51 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
52 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
53 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
54 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
55 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
56 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
57 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
58 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
59 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
60 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
61 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
62 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
63 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
64 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
65 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
66 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
67 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
68 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
69 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
70 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
71 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
72 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
73 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
74 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
75 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
76 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
77 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
78 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
79 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
80 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
81 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
82 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
83 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
84 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
85 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
86 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
87 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
88 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
89 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
90 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
91 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
92 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
93 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
94 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
95 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
96 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
97 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
98 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
99 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
100 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
101 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
102 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
103 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
104 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
105 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
106 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
107 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
108 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
109 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
110 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
132 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
133 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
134 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
135 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
136 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
137 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
138 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
139 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
140 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
141 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
142 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
143 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
144 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
145 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
146 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
147 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
148 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
149 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
150 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
151 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
152 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
153 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
154 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
155 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
156 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
157 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
158 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
159 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
160 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
161 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
162 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
163 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
164 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
165 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
166 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
167 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
168 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
169 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
170 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
171 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
172 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
173 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
174 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
175 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
176 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
177 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
178 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
179 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
180 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
181 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
182 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
183 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
184 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
185 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
186 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
187 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
188 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
189 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
190 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
191 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
192 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
193 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
194 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
195 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
196 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
197 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
198 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
199 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
200 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
201 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
202 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
203 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
204 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
205 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
206 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
207 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
208 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
209 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
210 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
211 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
212 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
213 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
214 3300053725 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 endosphere Metagenome Endosphere
215 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
216 8055742211 Bradyrhizobium japonicum 5038 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 78.95
Metatranscriptomes 0
Isolates 21.05

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.36
Nodule 12.96
Rhizoplane 5.26
Rhizosphere 50.2
Stem 0
Stem Tuber 0
Unclassified 18.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10335358 3300003322 Bacteria 1324
2 rootH1_10160754 3300003323 Bacteria 1505
3 Ga0055531_10024962 3300003794 Bacteria 2187
4 Ga0055543_1005547 3300004625 Bacteria 3202
5 Ga0065165_1001094 3300005262 Bacteria 32223
6 Ga0070683_100050916 3300005329 Bacteria 3836
7 Ga0068869_100253903 3300005334 Bacteria 1405
8 Ga0070666_10238830 3300005335 Bacteria 1284
9 Ga0070660_100009536 3300005339 Bacteria 6835
10 Ga0070689_100226702 3300005340 Bacteria 1535
11 Ga0070668_100304005 3300005347 Unclassified 1338
12 Ga0070675_100289327 3300005354 Bacteria 1442
13 Ga0070674_100058111 3300005356 Bacteria 2687
14 Ga0070667_100208492 3300005367 Bacteria 1736
15 Ga0070663_100222710 3300005455 Bacteria 1482
16 Ga0070685_10114956 3300005466 Bacteria 1664
17 Ga0070706_100065015 3300005467 Bacteria 3373
18 Ga0068853_100036838 3300005539 Bacteria 4161
19 Ga0070672_100382107 3300005543 Bacteria 1205
20 Ga0070695_100064506 3300005545 Bacteria 2383
21 Ga0070665_100054597 3300005548 Bacteria 4007
22 Ga0070665_100089488 3300005548 Bacteria 3084
23 Ga0068855_100247248 3300005563 Bacteria 1990
24 Ga0070664_100375059 3300005564 Bacteria 1298
25 Ga0068856_100175686 3300005614 Bacteria 2154
26 Ga0068852_100085603 3300005616 Bacteria 2808
27 Ga0068859_100199453 3300005617 Bacteria 2085
28 Ga0068859_100339014 3300005617 Bacteria 1597
29 Ga0068864_100059951 3300005618 Bacteria 3294
30 Ga0068863_100016719 3300005841 Bacteria 7039
31 Ga0068858_100196916 3300005842 Bacteria 1904
32 Ga0068860_100004345 3300005843 Bacteria 14480
33 Ga0068860_100164219 3300005843 Bacteria 2143
34 Ga0081455_10066757 3300005937 Bacteria 3002
35 Ga0081540_1028239 3300005983 Bacteria 3156
36 Ga0081540_1031444 3300005983 Bacteria 2918
37 Ga0070717_10039799 3300006028 Bacteria 3826
38 Ga0075365_10084996 3300006038 Bacteria 2148
39 Ga0075362_10098939 3300006177 Bacteria 1362
40 Ga0097621_100333928 3300006237 Bacteria 1345
41 Ga0075370_10008308 3300006353 Bacteria 5335
42 Ga0075434_100016922 3300006871 Bacteria 7013
43 Ga0068865_100064199 3300006881 Bacteria 2583
44 Ga0097620_100199451 3300006931 Bacteria 2085
45 Ga0097620_100338995 3300006931 Bacteria 1597
46 Ga0075435_100012847 3300007076 Bacteria 6208
47 Ga0105240_10151913 3300009093 Bacteria 2757
48 Ga0111539_10179369 3300009094 Bacteria 2474
49 Ga0105245_10082907 3300009098 Bacteria 2934
50 Ga0105247_10012942 3300009101 Bacteria 5003
51 Ga0105247_10049980 3300009101 Bacteria 2572
52 Ga0105238_10033337 3300009551 Bacteria 5243
53 Ga0105239_10026757 3300010375 Bacteria 6348
54 Ga0157369_10190674 3300013105 Bacteria 2154
55 Ga0157375_10310385 3300013308 Bacteria 1741
56 Ga0163163_10174591 3300014325 Bacteria 2195
57 Ga0214544_1000001 3300021320 Bacteria 783667
58 Ga0214542_1000005 3300021321 Bacteria 389646
59 Ga0214545_1000003 3300021324 Bacteria 720274
60 Ga0214543_1000002 3300021327 Bacteria 712733
61 Ga0213875_10000011 3300021388 Bacteria 332447
62 Ga0209758_1020476 3300025297 Bacteria 3128
63 Ga0209758_1032638 3300025297 Bacteria 2108
64 Ga0207426_1045313 3300025302 Bacteria 1338
65 Ga0209257_1000700 3300025304 Bacteria 51955
66 Ga0207682_10005493 3300025893 Bacteria 5163
67 Ga0207710_10050320 3300025900 Bacteria 1869
68 Ga0207688_10134358 3300025901 Bacteria 1452
69 Ga0207705_10098155 3300025909 Bacteria 2152
70 Ga0207684_10179838 3300025910 Bacteria 1823
71 Ga0207681_10050253 3300025923 Bacteria 2821
72 Ga0207706_10032370 3300025933 Bacteria 4657
73 Ga0207669_10130727 3300025937 Bacteria 1724
74 Ga0207689_10021540 3300025942 Bacteria 5420
75 Ga0207689_10351129 3300025942 Bacteria 1226
76 Ga0207661_10064722 3300025944 Bacteria 2965
77 Ga0207661_10197782 3300025944 Bacteria 1766
78 Ga0207651_10250596 3300025960 Bacteria 1449
79 Ga0207712_10212428 3300025961 Bacteria 1542
80 Ga0207678_10239068 3300026067 Bacteria 1555
81 Ga0207708_10038813 3300026075 Bacteria 3628
82 Ga0207676_10037678 3300026095 Bacteria 3686
83 Ga0207674_10360670 3300026116 Bacteria 1405
84 Ga0207675_100019411 3300026118 Bacteria 6342
85 Ga0207683_10000814 3300026121 Bacteria 28519
86 Ga0207683_10182131 3300026121 Bacteria 1905
87 Ga0207698_10185734 3300026142 Bacteria 1846
88 Ga0268266_10030006 3300028379 Bacteria 4621
89 Ga0268264_10000030 3300028381 Bacteria 418542
90 Ga0268264_10231568 3300028381 Bacteria 1706
91 Ga0307517_10116690 3300028786 Bacteria 1997
92 Ga0307511_10000018 3300030521 Bacteria 118259
93 Ga0307511_10065428 3300030521 Bacteria 2721
94 Ga0307509_10195338 3300031507 Bacteria 1868
95 Ga0307509_10201497 3300031507 Bacteria 1827
96 Ga0307516_10005543 3300031730 Bacteria 15055
97 Ga0307516_10072096 3300031730 Bacteria 3314
98 Ga0307409_100111072 3300031995 Bacteria 2298
99 Ga0307416_100110948 3300032002 Bacteria 2417
100 Ga0307411_10236472 3300032005 Bacteria 1427
101 Ga0307415_100190972 3300032126 Bacteria 1616
102 Ga0373947_0048590 3300035725 Bacteria 2546
103 Ga0395899_0051743 3300037312 Bacteria 3047
104 Ga0395899_0114851 3300037312 Bacteria 1933
105 Ga0395900_0002025 3300037418 Bacteria 22792
106 Ga0395898_0001313 3300037466 Bacteria 36176
107 Ga0436364_0238423 3300037853 Bacteria 23529
108 Ga0436364_0780669 3300037853 Bacteria 1565
109 Ga0395901_0002050 3300038443 Bacteria 20652
110 Ga0395901_0004078 3300038443 Bacteria 14714
111 Ga0436365_0722367 3300039437 Bacteria 2663
112 Ga0436365_1813462 3300039437 Bacteria 1788
113 Ga0439448_0008140 3300042005 Bacteria 3062
114 Ga0439435_0008370 3300042436 Bacteria 2397
115 Ga0466969_0059541 3300044656 Bacteria 1857
116 Ga0466966_0005307 3300044684 Bacteria 8474
117 Ga0466966_0126753 3300044684 Bacteria 1565
118 Ga0466961_0004312 3300044693 Bacteria 8904
119 Ga0466961_0072356 3300044693 Bacteria 2187
120 Ga0466959_0003667 3300045049 Bacteria 10129
121 Ga0495638_0007886 3300046460 Bacteria 7598
122 Ga0495638_0157179 3300046460 Bacteria 1314
123 Ga0495641_0018286 3300046461 Bacteria 3620
124 Ga0495641_0137202 3300046461 Bacteria 1092
125 Ga0495651_0053160 3300046462 Bacteria 3119
126 Ga0495605_0059924 3300046474 Bacteria 1826
127 Ga0495584_0031744 3300046491 Bacteria 2673
128 Ga0495606_0158790 3300046507 Bacteria 1321
129 Ga0495628_0026369 3300046516 Bacteria 4740
130 Ga0495630_0049669 3300046517 Bacteria 3139
131 Ga0495666_0072184 3300046526 Bacteria 1640
132 Ga0495652_0038387 3300046529 Bacteria 4150
133 Ga0495621_0029039 3300046539 Bacteria 1883
134 Ga0495622_0015674 3300046557 Bacteria 3524
135 Ga0495667_0003078 3300046559 Bacteria 11191
136 Ga0495656_0087328 3300046615 Bacteria 1420
137 Ga0495611_0066341 3300046648 Bacteria 1646
138 Ga0495657_0069651 3300046675 Bacteria 2301
139 Ga0495674_0001271 3300047319 Bacteria 24493
140 Ga0495680_0001616 3300047322 Bacteria 23967
141 Ga0495680_0214577 3300047322 Bacteria 1376
142 Ga0495673_0050467 3300047469 Bacteria 1826
143 Ga0495684_0110035 3300047471 Bacteria 2080
144 Ga0496100_0007093 3300048903 Bacteria 6151
145 Ga0496101_0003121 3300048904 Bacteria 10248
146 Ga0496101_0019208 3300048904 Bacteria 4662
147 Ga0496102_0032280 3300048905 Bacteria 4704
148 Ga0496106_0174424 3300048909 Bacteria 1705
149 Ga0496107_0013253 3300048910 Bacteria 5761
150 Ga0496108_0105426 3300048911 Bacteria 2407
151 Ga0496109_0311419 3300048912 Bacteria 1485
152 Ga0496110_0020585 3300048913 Bacteria 5572
153 Ga0496111_0050880 3300048914 Bacteria 2990
154 Ga0496113_0121706 3300048916 Bacteria 2041
155 Ga0496115_0048120 3300048918 Bacteria 3411
156 Ga0496115_0266543 3300048918 Bacteria 1408
157 Ga0496118_0113299 3300048921 Bacteria 1792
158 Ga0496119_0069001 3300048922 Bacteria 2079
159 Ga0496120_0044625 3300048923 Bacteria 2574
160 Ga0496121_0071936 3300048924 Bacteria 2779
161 Ga0496121_0099318 3300048924 Bacteria 2250
162 Ga0496121_0239155 3300048924 Bacteria 1266
163 Ga0496125_0001414 3300048928 Bacteria 35032
164 Ga0496126_0021728 3300048929 Bacteria 6261
165 Ga0496126_0115408 3300048929 Bacteria 2335
166 Ga0501070_0172102 3300049586 Bacteria 1783
167 Ga0501074_0049205 3300049590 Bacteria 3043
168 Ga0501080_0074339 3300049742 Bacteria 3161
169 nmdc:mga0yw44_231963_c1 3300050492 Bacteria 1225
170 nmdc:mga07m45_102883_c1 3300050496 Bacteria 1641
171 nmdc:mga08y16_135100_c1 3300050511 Bacteria 2563
172 nmdc:mga0n895_96392_c1 3300050512 Bacteria 2963
173 Ga0495619_0142460 3300053085 Bacteria 1651
174 Ga0500646_0036050 3300053090 Bacteria 1377
175 Ga0500583_0067878 3300053092 Bacteria 1699
176 Ga0500651_0084692 3300053093 Bacteria 1960
177 Ga0500650_0046604 3300053098 Unclassified 2009
178 Ga0500554_020448 3300053102 Bacteria 1820
179 Ga0500572_011434 3300053111 Bacteria 2148
180 Ga0500595_027879 3300053119 Bacteria 1930
181 Ga0500642_0000897 3300053130 Bacteria 8650
182 Ga0500559_0001095 3300053136 Bacteria 16428
183 Ga0500568_0021510 3300053139 Bacteria 2773
184 Ga0500589_005674 3300053147 Bacteria 4897
185 Ga0500589_062650 3300053147 Bacteria 1700
186 Ga0500603_001403 3300053150 Bacteria 5498
187 Ga0500603_024806 3300053150 Bacteria 1503
188 Ga0500604_0026517 3300053151 Bacteria 1672
189 Ga0500627_0008877 3300053158 Bacteria 3593
190 Ga0500634_0143316 3300053161 Bacteria 1128
191 Ga0500639_024214 3300053163 Bacteria 3209
192 Ga0500636_0011704 3300053177 Bacteria 5136
193 Ga0500636_0028523 3300053177 Bacteria 3296
194 Ga0500576_038679 3300053725 Bacteria 2152
195 Ga0466962_0027610 3300061719 Bacteria 2723

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050512 nmdc:mga0n895_96392_c1 nmdc:mga0n895_96392_c1_34_846 263
2 3300048911 Ga0496108_0105426 Ga0496108_0105426_859_1764 275
3 3300048913 Ga0496110_0020585 Ga0496110_0020585_1983_2888 275
4 3300048914 Ga0496111_0050880 Ga0496111_0050880_1011_1916 275
5 3300048918 Ga0496115_0048120 Ga0496115_0048120_1302_2225 299
6 3300030521 Ga0307511_10000018 Ga0307511_1000001822 301
7 3300037312 Ga0395899_0051743 Ga0395899_0051743_1716_2663 307
8 3300037466 Ga0395898_0001313 Ga0395898_0001313_21876_22823 307
9 3300038443 Ga0395901_0004078 Ga0395901_0004078_13270_14217 307
10 3300049586 Ga0501070_0172102 Ga0501070_0172102_458_1405 307
11 3300049590 Ga0501074_0049205 Ga0501074_0049205_1396_2343 307
12 3300049742 Ga0501080_0074339 Ga0501080_0074339_257_1204 307
13 3300037853 Ga0436364_0780669 Ga0436364_0780669_534_1517 310
14 3300044693 Ga0466961_0072356 Ga0466961_0072356_84_1076 311
15 iso_pu_bacteria 2558860280 2559428246 312
16 iso_pu_bacteria 2811994872 2812322669 312
17 3300046461 Ga0495641_0137202 Ga0495641_0137202_68_1036 314
18 3300046462 Ga0495651_0053160 Ga0495651_0053160_1759_2727 314
19 3300046516 Ga0495628_0026369 Ga0495628_0026369_541_1509 314
20 3300046517 Ga0495630_0049669 Ga0495630_0049669_1745_2713 314
21 3300046526 Ga0495666_0072184 Ga0495666_0072184_108_1076 314
22 3300046529 Ga0495652_0038387 Ga0495652_0038387_203_1171 314
23 3300046559 Ga0495667_0003078 Ga0495667_0003078_9701_10669 314
24 3300046675 Ga0495657_0069651 Ga0495657_0069651_91_1059 314
25 3300047319 Ga0495674_0001271 Ga0495674_0001271_295_1263 314
26 3300047322 Ga0495680_0001616 Ga0495680_0001616_36_1004 314
27 3300047471 Ga0495684_0110035 Ga0495684_0110035_538_1506 314
28 3300053085 Ga0495619_0142460 Ga0495619_0142460_442_1410 314
29 3300005339 Ga0070660_100009536 Ga0070660_1000095367 315
30 3300005563 Ga0068855_100247248 Ga0068855_1002472482 315
31 3300006871 Ga0075434_100016922 Ga0075434_1000169227 315
32 3300007076 Ga0075435_100012847 Ga0075435_1000128476 315
33 3300025909 Ga0207705_10098155 Ga0207705_100981552 315
34 3300025944 Ga0207661_10197782 Ga0207661_101977822 315
35 3300048903 Ga0496100_0007093 Ga0496100_0007093_3556_4527 315
36 3300048904 Ga0496101_0003121 Ga0496101_0003121_8147_9118 315
37 3300048904 Ga0496101_0019208 Ga0496101_0019208_2685_3656 315
38 3300048905 Ga0496102_0032280 Ga0496102_0032280_3356_4327 315
39 3300048909 Ga0496106_0174424 Ga0496106_0174424_29_1000 315
40 3300048910 Ga0496107_0013253 Ga0496107_0013253_1356_2327 315
41 3300048918 Ga0496115_0266543 Ga0496115_0266543_323_1294 315
42 iso_pu_bacteria 3006425503 3006429202 315
43 3300003323 rootH1_10160754 rootH1_101607542 316
44 3300005539 Ga0068853_100036838 Ga0068853_1000368384 316
45 3300005616 Ga0068852_100085603 Ga0068852_1000856034 316
46 3300009551 Ga0105238_10033337 Ga0105238_100333374 316
47 3300026142 Ga0207698_10185734 Ga0207698_101857342 316
48 3300048928 Ga0496125_0001414 Ga0496125_0001414_20306_21283 316
49 iso_pu_bacteria 2808606306 2808631546 316
50 iso_pu_bacteria 3001889506 3001890985 316
51 3300005334 Ga0068869_100253903 Ga0068869_1002539031 317
52 3300009101 Ga0105247_10012942 Ga0105247_100129425 318
53 3300046461 Ga0495641_0018286 Ga0495641_0018286_2294_3298 319
54 3300047322 Ga0495680_0214577 Ga0495680_0214577_149_1153 319
55 3300044684 Ga0466966_0126753 Ga0466966_0126753_290_1285 320
56 iso_pu_bacteria 2675903058 2676476453 320
57 iso_pu_bacteria 2827628540 2827632261 320
58 3300006028 Ga0070717_10039799 Ga0070717_100397992 321
59 3300044656 Ga0466969_0059541 Ga0466969_0059541_700_1698 321
60 3300044684 Ga0466966_0005307 Ga0466966_0005307_4308_5306 321
61 3300044693 Ga0466961_0004312 Ga0466961_0004312_2886_3884 321
62 3300045049 Ga0466959_0003667 Ga0466959_0003667_2940_3938 321
63 3300061719 Ga0466962_0027610 Ga0466962_0027610_790_1788 321
64 iso_pu_bacteria 2617270741 2617373265 322
65 iso_pu_bacteria 2824679649 2824680903 322
66 iso_pu_bacteria 2824732956 2824738345 322
67 iso_pu_bacteria 2908775508 2908781723 322
68 iso_pu_bacteria 2922393267 2922401128 322
69 iso_pu_bacteria 2513237095 2513650910 323
70 iso_pu_bacteria 2517093001 2517100709 323
71 iso_pu_bacteria 2524023205 2524438074 323
72 iso_pu_bacteria 2617270735 2617353539 323
73 iso_pu_bacteria 2744054633 2745080970 323
74 iso_pu_bacteria 2816332527 2818238276 323
75 iso_pu_bacteria 2824773399 2824773432 323
76 iso_pu_bacteria 2841957949 2841962005 323
77 iso_pu_bacteria 2841966195 2841968055 323
78 iso_pu_bacteria 2857509624 2857512306 323
79 iso_pu_bacteria 2888378607 2888381400 323
80 iso_pu_bacteria 2935684952 2935690349 323
81 iso_pu_bacteria 2935713505 2935717955 323
82 iso_pu_bacteria 2935722832 2935726895 323
83 iso_pu_bacteria 2935732158 2935735665 323
84 iso_pu_bacteria 2935741537 2935745064 323
85 iso_pu_bacteria 2935750917 2935755359 323
86 iso_pu_bacteria 2940556831 2940561360 323
87 3300005329 Ga0070683_100050916 Ga0070683_1000509162 324
88 3300006038 Ga0075365_10084996 Ga0075365_100849962 324
89 3300009093 Ga0105240_10151913 Ga0105240_101519133 324
90 3300025944 Ga0207661_10064722 Ga0207661_100647222 324
91 3300050492 nmdc:mga0yw44_231963_c1 nmdc:mga0yw44_231963_c1_147_1136 324
92 3300005340 Ga0070689_100226702 Ga0070689_1002267022 325
93 3300005614 Ga0068856_100175686 Ga0068856_1001756862 325
94 3300005983 Ga0081540_1028239 Ga0081540_10282393 325
95 3300009098 Ga0105245_10082907 Ga0105245_100829072 325
96 3300046460 Ga0495638_0007886 Ga0495638_0007886_3289_4266 325
97 iso_pu_bacteria 3005506211 3005511391 325
98 3300009094 Ga0111539_10179369 Ga0111539_101793693 326
99 3300021320 Ga0214544_1000001 Ga0214544_1000001213 326
100 3300021321 Ga0214542_1000005 Ga0214542_1000005213 326
101 3300021324 Ga0214545_1000003 Ga0214545_1000003551 326
102 3300021327 Ga0214543_1000002 Ga0214543_1000002214 326
103 3300039437 Ga0436365_0722367 Ga0436365_0722367_185_1165 326
104 3300050511 nmdc:mga08y16_135100_c1 nmdc:mga08y16_135100_c1_830_1810 326
105 3300053111 Ga0500572_011434 Ga0500572_011434_755_1735 326
106 3300053136 Ga0500559_0001095 Ga0500559_0001095_1170_2150 326
107 3300053163 Ga0500639_024214 Ga0500639_024214_174_1154 326
108 3300053725 Ga0500576_038679 Ga0500576_038679_1067_2047 326
109 iso_pu_bacteria 2513237139 2513874765 326
110 iso_pu_bacteria 2802429603 2805916766 326
111 iso_pu_bacteria 2824626560 2824634343 326
112 iso_pu_bacteria 2824635225 2824641616 326
113 iso_pu_bacteria 2824671348 2824675187 326
114 iso_pu_bacteria 2824687955 2824691468 326
115 iso_pu_bacteria 2824723954 2824730029 326
116 iso_pu_bacteria 2847939898 2847944120 326
117 iso_pu_bacteria 2879083081 2879088341 326
118 iso_pu_bacteria 2881364244 2881365964 326
119 iso_pu_bacteria 3005483717 3005488346 326
120 3300005467 Ga0070706_100065015 Ga0070706_1000650152 327
121 3300005548 Ga0070665_100054597 Ga0070665_1000545971 327
122 3300005843 Ga0068860_100004345 Ga0068860_1000043458 327
123 3300006353 Ga0075370_10008308 Ga0075370_100083082 327
124 3300021388 Ga0213875_10000011 Ga0213875_10000011254 327
125 3300025297 Ga0209758_1020476 Ga0209758_10204762 327
126 3300025910 Ga0207684_10179838 Ga0207684_101798382 327
127 3300028379 Ga0268266_10030006 Ga0268266_100300063 327
128 3300028381 Ga0268264_10000030 Ga0268264_10000030321 327
129 3300037853 Ga0436364_0238423 Ga0436364_0238423_22055_23038 327
130 3300042436 Ga0439435_0008370 Ga0439435_0008370_94_1077 327
131 3300048916 Ga0496113_0121706 Ga0496113_0121706_164_1147 327
132 3300048921 Ga0496118_0113299 Ga0496118_0113299_406_1389 327
133 3300048922 Ga0496119_0069001 Ga0496119_0069001_447_1430 327
134 3300048923 Ga0496120_0044625 Ga0496120_0044625_653_1636 327
135 3300048924 Ga0496121_0099318 Ga0496121_0099318_775_1758 327
136 3300048924 Ga0496121_0239155 Ga0496121_0239155_161_1144 327
137 3300048929 Ga0496126_0115408 Ga0496126_0115408_887_1870 327
138 3300053092 Ga0500583_0067878 Ga0500583_0067878_562_1545 327
139 3300053130 Ga0500642_0000897 Ga0500642_0000897_3527_4510 327
140 3300053139 Ga0500568_0021510 Ga0500568_0021510_157_1140 327
141 3300053158 Ga0500627_0008877 Ga0500627_0008877_1098_2081 327
142 iso_pu_bacteria 2838122688 2838128011 327
143 iso_pu_bacteria 2841941048 2841943309 327
144 iso_pu_bacteria 2841949485 2841953962 327
145 iso_pu_bacteria 2841974524 2841981309 327
146 iso_pu_bacteria 2841983080 2841988108 327
147 iso_pu_bacteria 2876761206 2876762980 327
148 iso_pu_bacteria 2929615660 2929619447 327
149 iso_pu_bacteria 2929624759 2929628083 327
150 iso_pu_bacteria 2933577622 2933581367 327
151 iso_pu_bacteria 8055742211 8055749296 327
152 3300005335 Ga0070666_10238830 Ga0070666_102388302 328
153 3300005347 Ga0070668_100304005 Ga0070668_1003040051 328
154 3300005354 Ga0070675_100289327 Ga0070675_1002893272 328
155 3300005356 Ga0070674_100058111 Ga0070674_1000581112 328
156 3300005367 Ga0070667_100208492 Ga0070667_1002084922 328
157 3300005455 Ga0070663_100222710 Ga0070663_1002227102 328
158 3300005466 Ga0070685_10114956 Ga0070685_101149561 328
159 3300005543 Ga0070672_100382107 Ga0070672_1003821071 328
160 3300005545 Ga0070695_100064506 Ga0070695_1000645061 328
161 3300005548 Ga0070665_100089488 Ga0070665_1000894882 328
162 3300005617 Ga0068859_100199453 Ga0068859_1001994532 328
163 3300005617 Ga0068859_100339014 Ga0068859_1003390141 328
164 3300005618 Ga0068864_100059951 Ga0068864_1000599514 328
165 3300005842 Ga0068858_100196916 Ga0068858_1001969163 328
166 3300005843 Ga0068860_100164219 Ga0068860_1001642191 328
167 3300005937 Ga0081455_10066757 Ga0081455_100667573 328
168 3300006237 Ga0097621_100333928 Ga0097621_1003339282 328
169 3300006881 Ga0068865_100064199 Ga0068865_1000641992 328
170 3300006931 Ga0097620_100199451 Ga0097620_1001994512 328
171 3300006931 Ga0097620_100338995 Ga0097620_1003389951 328
172 3300009101 Ga0105247_10049980 Ga0105247_100499802 328
173 3300013308 Ga0157375_10310385 Ga0157375_103103852 328
174 3300014325 Ga0163163_10174591 Ga0163163_101745912 328
175 3300025297 Ga0209758_1032638 Ga0209758_10326382 328
176 3300025893 Ga0207682_10005493 Ga0207682_100054936 328
177 3300025923 Ga0207681_10050253 Ga0207681_100502531 328
178 3300025937 Ga0207669_10130727 Ga0207669_101307272 328
179 3300025942 Ga0207689_10021540 Ga0207689_100215402 328
180 3300025960 Ga0207651_10250596 Ga0207651_102505961 328
181 3300025961 Ga0207712_10212428 Ga0207712_102124281 328
182 3300026067 Ga0207678_10239068 Ga0207678_102390682 328
183 3300026075 Ga0207708_10038813 Ga0207708_100388132 328
184 3300026095 Ga0207676_10037678 Ga0207676_100376782 328
185 3300026116 Ga0207674_10360670 Ga0207674_103606702 328
186 3300026118 Ga0207675_100019411 Ga0207675_1000194113 328
187 3300026121 Ga0207683_10000814 Ga0207683_1000081412 328
188 3300026121 Ga0207683_10182131 Ga0207683_101821312 328
189 3300028381 Ga0268264_10231568 Ga0268264_102315682 328
190 3300028786 Ga0307517_10116690 Ga0307517_101166902 328
191 3300031507 Ga0307509_10201497 Ga0307509_102014972 328
192 3300031995 Ga0307409_100111072 Ga0307409_1001110721 328
193 3300032002 Ga0307416_100110948 Ga0307416_1001109484 328
194 3300032005 Ga0307411_10236472 Ga0307411_102364722 328
195 3300032126 Ga0307415_100190972 Ga0307415_1001909722 328
196 3300046460 Ga0495638_0157179 Ga0495638_0157179_81_1067 328
197 3300046474 Ga0495605_0059924 Ga0495605_0059924_54_1040 328
198 3300046491 Ga0495584_0031744 Ga0495584_0031744_1367_2353 328
199 3300046507 Ga0495606_0158790 Ga0495606_0158790_75_1061 328
200 3300046539 Ga0495621_0029039 Ga0495621_0029039_757_1743 328
201 3300046615 Ga0495656_0087328 Ga0495656_0087328_133_1119 328
202 3300046648 Ga0495611_0066341 Ga0495611_0066341_265_1251 328
203 3300047469 Ga0495673_0050467 Ga0495673_0050467_262_1248 328
204 3300048912 Ga0496109_0311419 Ga0496109_0311419_27_1013 328
205 3300048929 Ga0496126_0021728 Ga0496126_0021728_99_1085 328
206 3300050496 nmdc:mga07m45_102883_c1 nmdc:mga07m45_102883_c1_317_1303 328
207 3300053098 Ga0500650_0046604 Ga0500650_0046604_405_1391 328
208 3300053147 Ga0500589_062650 Ga0500589_062650_550_1536 328
209 3300053161 Ga0500634_0143316 Ga0500634_0143316_90_1076 328
210 3300004625 Ga0055543_1005547 Ga0055543_10055472 329
211 3300005262 Ga0065165_1001094 Ga0065165_10010946 329
212 3300006177 Ga0075362_10098939 Ga0075362_100989392 329
213 3300025302 Ga0207426_1045313 Ga0207426_10453132 329
214 3300025900 Ga0207710_10050320 Ga0207710_100503202 329
215 3300025901 Ga0207688_10134358 Ga0207688_101343582 329
216 3300025942 Ga0207689_10351129 Ga0207689_103511291 329
217 3300048924 Ga0496121_0071936 Ga0496121_0071936_883_1878 329
218 3300053093 Ga0500651_0084692 Ga0500651_0084692_409_1410 329
219 3300003794 Ga0055531_10024962 Ga0055531_100249622 330
220 3300005564 Ga0070664_100375059 Ga0070664_1003750591 330
221 3300010375 Ga0105239_10026757 Ga0105239_100267573 330
222 3300013105 Ga0157369_10190674 Ga0157369_101906742 330
223 3300025304 Ga0209257_1000700 Ga0209257_100070030 330
224 3300025933 Ga0207706_10032370 Ga0207706_100323703 330
225 3300037312 Ga0395899_0114851 Ga0395899_0114851_499_1491 330
226 3300037418 Ga0395900_0002025 Ga0395900_0002025_11499_12491 330
227 3300038443 Ga0395901_0002050 Ga0395901_0002050_8136_9128 330
228 3300039437 Ga0436365_1813462 Ga0436365_1813462_470_1462 330
229 3300042005 Ga0439448_0008140 Ga0439448_0008140_1188_2180 330
230 3300003322 rootL2_10335358 rootL2_103353582 331
231 3300005841 Ga0068863_100016719 Ga0068863_1000167192 331
232 3300005983 Ga0081540_1031444 Ga0081540_10314442 331
233 3300030521 Ga0307511_10065428 Ga0307511_100654282 331
234 3300031507 Ga0307509_10195338 Ga0307509_101953382 331
235 3300031730 Ga0307516_10005543 Ga0307516_100055434 331
236 3300031730 Ga0307516_10072096 Ga0307516_100720963 331
237 3300035725 Ga0373947_0048590 Ga0373947_0048590_97_1131 331
238 3300046557 Ga0495622_0015674 Ga0495622_0015674_694_1728 331
239 3300053090 Ga0500646_0036050 Ga0500646_0036050_170_1165 331
240 3300053102 Ga0500554_020448 Ga0500554_020448_745_1752 331
241 3300053119 Ga0500595_027879 Ga0500595_027879_380_1498 331
242 3300053147 Ga0500589_005674 Ga0500589_005674_483_1478 331
243 3300053150 Ga0500603_001403 Ga0500603_001403_1646_2653 331
244 3300053150 Ga0500603_024806 Ga0500603_024806_471_1472 331
245 3300053151 Ga0500604_0026517 Ga0500604_0026517_368_1363 331
246 3300053177 Ga0500636_0011704 Ga0500636_0011704_1338_2339 331
247 3300053177 Ga0500636_0028523 Ga0500636_0028523_362_1363 331

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

31

237

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
4j34-assembly1.cif.gz_A crystal structure of kynurenine 3-monooxygenase - truncated at position 394 plus his tag cleaved. 0.9543 2 30
6pvi-assembly1.cif.gz_A crystal structure of phqk in complex with paraherquamide l 0.9351 2 33
5x6r-assembly2.cif.gz_B crystal structure of saccharomyces cerevisiae kmo in complex with ro 61-8048 0.9346 1 31
3ka7-assembly1.cif.gz_A crystal structure of an oxidoreductase from methanosarcina mazei. northeast structural genomics consortium target id mar208 0.9298 1 30
3nrn-assembly1.cif.gz_A crystal structure of pf1083 protein from pyrococcus furiosus, northeast structural genomics consortium target pfr223 0.9113 1 33
ID Description Score Start End Superfamily
6cr0A01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9444 2 30 3.50.50.60
af_Q2QVJ5_13_242_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9314 2 33 3.90.180.10
5ttkA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.924 2 30 3.50.50.60
af_Q0D7W4_71_358_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9238 2 30 3.50.50.60
af_Q54H02_2_246_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9087 2 32 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A1C5IUZ6-F1-model_v4 deleted 0.9745 1 324
AF-A0A7W0GHH3-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9742 1 323
AF-A0A7W5VB37-F1-model_v4 Nucleoside-diphosphate-sugar epimerase 0.973 1 321
AF-A0A2T0LJY4-F1-model_v4 Nucleoside-diphosphate-sugar epimerase 0.9687 34 321
AF-A0A6B2DEZ8-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.968 1 139

Feature Viewer

pLDDT pTM Quality
94.49 0.92 High
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Predicted Structure (AlphaFold2)

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