F349040
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 236 | 163 | 189 | 506 |
Family's Representative Sequence
| Representative Sequence | 3300009147|Ga0114129_10280289|Ga0114129_102802892 |
| Length | 516 |
| Sequence | MTHPIPTVTVYASGVATDDVIDVARGLARVEIAPDAIAAMGTSRSIVDGIERAGRPVYGVSTGFGALASTFVAPDRRAELQHALIRSHAAGVGAPMPREVVRAMMLLRVRSLAIGMSGVRPLVTQALVDLLNHDITPWVPEHGSLGASGDLAPLAHCALVLLGEGWVLGKDGARVPGADALHAAGLRPIELSSKEGLALINGTDGMLGMLLLALHDARHLFTMADLTAALSTEAMLGSDRPFLPELHAIRPHPGQTVSAANIHRLLQGSKIMDSHRDDMTHAVQDAYSIRCAPQVAGAARDTLDFAALVAGRELVSVVDNPVVLTDGRVLSTGNFHGAPLGFAADFLAIAAAEVGAIAERRVDRLLDVCRSRDLPAFLTPDPGVNSGLMIAQYTAAGIVAENRRLAGPASVDSVPTSGMQEDHVSMGWAAARKLRTVLDNLTSILAVELLSAARGLQLRVPLAPSPAGRLAVEAVSAYAGVPGPDSFVAPAIEATRALVAGHELRAAIEAEIGPLD |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2501939600 | Micromonospora sp. L5 | Isolate | Unclassified |
| 2 | 2515154088 | Salinispora arenicola CNT800 | Isolate | Rhizosphere |
| 3 | 2515154129 | Salinispora pacifica CNS103 | Isolate | Rhizosphere |
| 4 | 2515154137 | Salinispora arenicola CNX482 | Isolate | Rhizosphere |
| 5 | 2515154202 | Salinispora pacifica CNT084 | Isolate | Rhizosphere |
| 6 | 2515154203 | Salinispora arenicola CNR921 | Isolate | Rhizosphere |
| 7 | 2622736626 | Micromonospora rhizosphaerae DSM 45431 | Isolate | Rhizosphere |
| 8 | 2675903059 | Asanoa hainanensis CGMCC 4.5593 | Isolate | Rhizosphere |
| 9 | 2751185782 | Actinoplanes subtropicus NRRL B-24665 | Isolate | Rhizosphere |
| 10 | 2772190715 | Micromonospora chokoriensis NRRL B-24750 | Isolate | Unclassified |
| 11 | 2831935698 | Jishengella sp. AZ1-13 | Isolate | Unclassified |
| 12 | 2832004796 | Micromonospora endophytica JCM 18317 | Isolate | Unclassified |
| 13 | 2855670206 | Micromonospora noduli Lupac 07 | Isolate | Nodule |
| 14 | 2855676851 | Micromonospora saelicesensis GAR05 | Isolate | Unclassified |
| 15 | 2855683550 | Micromonospora sp. RP3T | Isolate | Unclassified |
| 16 | 2856858025 | Micromonospora aurantiaca 110B(2018) | Isolate | Unclassified |
| 17 | 2857288857 | Micromonospora noduli ONO23 | Isolate | Unclassified |
| 18 | 2858848962 | Micromonospora saelicesensis GAR06 | Isolate | Unclassified |
| 19 | 2858882152 | Micromonospora noduli MED15 | Isolate | Nodule |
| 20 | 2858888857 | Micromonospora saelicesensis Lupac 06 | Isolate | Unclassified |
| 21 | 2858895516 | Micromonospora saelicesensis PSN13 | Isolate | Unclassified |
| 22 | 2858902515 | Micromonospora sp. MW-13 | Isolate | Rhizosphere |
| 23 | 2866065130 | Micromonospora endophytica DSM 45430 | Isolate | Unclassified |
| 24 | 2867302475 | Micromonospora globbae WPS1-2 | Isolate | Unclassified |
| 25 | 2867312974 | Micromonospora musae NGC1-4 | Isolate | Unclassified |
| 26 | 2867319477 | Micromonospora musae MS1-9 | Isolate | Unclassified |
| 27 | 2867507094 | Micromonospora zingiberis PLAI 1-1 | Isolate | Unclassified |
| 28 | 2869048445 | Micromonospora saelicesensis PSN01 | Isolate | Unclassified |
| 29 | 2869061728 | Micromonospora noduli ONO86 | Isolate | Unclassified |
| 30 | 2869068681 | Micromonospora noduli GUI43 | Isolate | Unclassified |
| 31 | 2880489317 | Micromonospora ureilytica DSM 101692 | Isolate | Unclassified |
| 32 | 2880495981 | Micromonospora vinacea DSM 101695 | Isolate | Unclassified |
| 33 | 2887478801 | Catellatospora paridis NEAU-CL2 | Isolate | Rhizosphere |
| 34 | 2902582711 | Micromonospora sp. AP08 | Isolate | Unclassified |
| 35 | 2929219909 | Micromonospora sp. R-75348 Hybrid assembly | Isolate | Unclassified |
| 36 | 2929226422 | Micromonospora sp. R-74116 Hybrid assembly | Isolate | Unclassified |
| 37 | 2996221748 | Micromonospora veneta CAP181 | Isolate | Unclassified |
| 38 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 39 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 40 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 41 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 42 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 43 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 44 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 45 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 46 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 47 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 48 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 49 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 50 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 51 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 52 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 53 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 54 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 55 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 56 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 57 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 58 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 59 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 60 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 61 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 62 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 63 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 64 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 65 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 66 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 67 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 68 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 69 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 70 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 71 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 72 | 3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Metagenome | Rhizosphere |
| 73 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 76 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 77 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 78 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 79 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 80 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 81 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 82 | 3300025885 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 95 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 96 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 97 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 98 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 99 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 100 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 101 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 102 | 3300027671 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 103 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 104 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 105 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 106 | 3300030522 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM | Metagenome | Unclassified |
| 107 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 108 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 109 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 110 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 111 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 112 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 113 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 114 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 115 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 116 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 117 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 118 | 3300035115 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 | Metagenome | Rhizosphere |
| 119 | 3300035117 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 | Metagenome | Rhizosphere |
| 120 | 3300035207 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 | Metagenome | Rhizosphere |
| 121 | 3300035242 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 | Metagenome | Rhizosphere |
| 122 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 123 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 124 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 125 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 126 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 127 | 3300041406 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 | Metagenome | Rhizosphere |
| 128 | 3300042014 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 | Metagenome | Rhizosphere |
| 129 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 135 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 136 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 137 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 138 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 139 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 140 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 141 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 142 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 143 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 144 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 145 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 146 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 147 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 148 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 149 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 150 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 151 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 152 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 153 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 154 | 649633069 | Micromonospora sp. L5 | Isolate | Unclassified |
| 155 | 8001781756 | Catellatospora tritici NEAU-YM18 | Isolate | Rhizosphere |
| 156 | 8003830390 | Micromonospora parastrephiae STR1_7 | Isolate | Rhizosphere |
| 157 | 8003856774 | Micromonospora echinofusca MPMI6 | Isolate | Unclassified |
| 158 | 8003870546 | Micromonospora tarensis STR1s_6 | Isolate | Rhizosphere |
| 159 | 8054704163 | Micromonospora trifolii NIE79 | Isolate | Nodule |
| 160 | 8054727385 | Micromonospora alfalfae MED01 | Isolate | Nodule |
| 161 | 8054734606 | Micromonospora hortensis NIE111 | Isolate | Nodule |
| 162 | 8055412473 | Micromonospora phytophila DSM 105363 | Isolate | Nodule |
| 163 | 8056054917 | Glycomyces luteolus NEAU-A15 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 80.08 |
| Metatranscriptomes | 0 |
| Isolates | 19.92 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0.42 |
| Nodule | 2.54 |
| Rhizoplane | 2.54 |
| Rhizosphere | 75 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 19.49 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25406J46586_10000951 | 3300003203 | Bacteria | 13614 |
| 2 | Ga0070683_100000515 | 3300005329 | Bacteria | 27174 |
| 3 | Ga0070683_100004203 | 3300005329 | Bacteria | 11802 |
| 4 | Ga0068868_100037921 | 3300005338 | Bacteria | 3739 |
| 5 | Ga0070660_100099729 | 3300005339 | Bacteria | 2300 |
| 6 | Ga0070660_100127268 | 3300005339 | Bacteria | 2036 |
| 7 | Ga0070668_100001900 | 3300005347 | Bacteria | 15283 |
| 8 | Ga0070668_100009535 | 3300005347 | Bacteria | 7204 |
| 9 | Ga0070675_100003703 | 3300005354 | Bacteria | 11616 |
| 10 | Ga0070659_100014932 | 3300005366 | Bacteria | 5809 |
| 11 | Ga0070714_100008235 | 3300005435 | Bacteria | 8125 |
| 12 | Ga0070714_100065276 | 3300005435 | Bacteria | 3135 |
| 13 | Ga0070714_100135850 | 3300005435 | Bacteria | 2202 |
| 14 | Ga0070700_100003470 | 3300005441 | Bacteria | 8131 |
| 15 | Ga0070708_100000346 | 3300005445 | Bacteria | 35019 |
| 16 | Ga0070708_100047547 | 3300005445 | Bacteria | 3790 |
| 17 | Ga0070663_100002214 | 3300005455 | Bacteria | 10878 |
| 18 | Ga0070662_100003119 | 3300005457 | Bacteria | 10292 |
| 19 | Ga0070706_100000156 | 3300005467 | Bacteria | 86633 |
| 20 | Ga0070706_100000552 | 3300005467 | Bacteria | 43513 |
| 21 | Ga0070706_100003745 | 3300005467 | Bacteria | 14865 |
| 22 | Ga0070706_100004003 | 3300005467 | Bacteria | 14328 |
| 23 | Ga0070707_100000078 | 3300005468 | Bacteria | 86633 |
| 24 | Ga0070707_100003484 | 3300005468 | Bacteria | 14851 |
| 25 | Ga0070707_100018696 | 3300005468 | Bacteria | 6521 |
| 26 | Ga0070707_100162604 | 3300005468 | Bacteria | 2175 |
| 27 | Ga0070707_100212150 | 3300005468 | Bacteria | 1887 |
| 28 | Ga0070699_100000636 | 3300005518 | Bacteria | 32901 |
| 29 | Ga0070699_100000700 | 3300005518 | Bacteria | 31080 |
| 30 | Ga0070699_100001168 | 3300005518 | Bacteria | 24356 |
| 31 | Ga0070679_100042923 | 3300005530 | Bacteria | 4504 |
| 32 | Ga0070684_100025697 | 3300005535 | Bacteria | 4953 |
| 33 | Ga0070697_100002240 | 3300005536 | Bacteria | 14841 |
| 34 | Ga0070697_100003603 | 3300005536 | Bacteria | 11895 |
| 35 | Ga0070697_100029071 | 3300005536 | Bacteria | 4430 |
| 36 | Ga0070697_100050768 | 3300005536 | Bacteria | 3367 |
| 37 | Ga0070697_100051803 | 3300005536 | Bacteria | 3336 |
| 38 | Ga0070697_100070023 | 3300005536 | Bacteria | 2874 |
| 39 | Ga0070704_100003109 | 3300005549 | Bacteria | 9465 |
| 40 | Ga0070704_100128430 | 3300005549 | Bacteria | 1960 |
| 41 | Ga0070664_100005216 | 3300005564 | Bacteria | 10418 |
| 42 | Ga0068856_100143333 | 3300005614 | Bacteria | 2397 |
| 43 | Ga0068852_100043854 | 3300005616 | Bacteria | 3795 |
| 44 | Ga0068864_100004224 | 3300005618 | Bacteria | 11820 |
| 45 | Ga0068864_100184008 | 3300005618 | Bacteria | 1912 |
| 46 | Ga0068863_100031901 | 3300005841 | Bacteria | 5025 |
| 47 | Ga0068863_100057276 | 3300005841 | Bacteria | 3688 |
| 48 | Ga0068858_100089918 | 3300005842 | Bacteria | 2857 |
| 49 | Ga0068860_100065853 | 3300005843 | Bacteria | 3440 |
| 50 | Ga0068862_100012933 | 3300005844 | Bacteria | 6905 |
| 51 | Ga0068862_100025583 | 3300005844 | Bacteria | 4956 |
| 52 | Ga0068862_100041943 | 3300005844 | Bacteria | 3895 |
| 53 | Ga0081540_1004442 | 3300005983 | Bacteria | 10696 |
| 54 | Ga0081540_1008323 | 3300005983 | Bacteria | 7253 |
| 55 | Ga0081539_10000456 | 3300005985 | Bacteria | 86722 |
| 56 | Ga0081539_10003907 | 3300005985 | Bacteria | 17341 |
| 57 | Ga0081539_10005425 | 3300005985 | Bacteria | 13027 |
| 58 | Ga0081539_10005928 | 3300005985 | Bacteria | 12069 |
| 59 | Ga0081539_10062619 | 3300005985 | Bacteria | 2033 |
| 60 | Ga0070717_10000009 | 3300006028 | Bacteria | 297183 |
| 61 | Ga0070717_10009101 | 3300006028 | Bacteria | 7456 |
| 62 | Ga0075428_100000504 | 3300006844 | Bacteria | 39650 |
| 63 | Ga0075428_100001963 | 3300006844 | Bacteria | 22131 |
| 64 | Ga0075428_100029869 | 3300006844 | Bacteria | 6029 |
| 65 | Ga0075430_100000490 | 3300006846 | Bacteria | 29713 |
| 66 | Ga0075430_100024981 | 3300006846 | Bacteria | 5082 |
| 67 | Ga0075430_100040364 | 3300006846 | Bacteria | 3950 |
| 68 | Ga0075431_100001049 | 3300006847 | Bacteria | 24673 |
| 69 | Ga0075431_100036725 | 3300006847 | Bacteria | 5046 |
| 70 | Ga0075431_100046254 | 3300006847 | Bacteria | 4487 |
| 71 | Ga0075429_100005348 | 3300006880 | Bacteria | 11043 |
| 72 | Ga0099794_10000181 | 3300007265 | Bacteria | 23021 |
| 73 | Ga0111539_10014346 | 3300009094 | Bacteria | 9893 |
| 74 | Ga0114129_10000010 | 3300009147 | Bacteria | 147651 |
| 75 | Ga0114129_10002589 | 3300009147 | Bacteria | 25132 |
| 76 | Ga0114129_10003865 | 3300009147 | Bacteria | 21121 |
| 77 | Ga0114129_10280289 | 3300009147 | Bacteria | 2227 |
| 78 | Ga0105248_10277667 | 3300009177 | Bacteria | 1886 |
| 79 | Ga0105249_10480483 | 3300009553 | Bacteria | 1285 |
| 80 | Ga0105239_10103476 | 3300010375 | Bacteria | 3151 |
| 81 | Ga0157369_10116952 | 3300013105 | Bacteria | 2830 |
| 82 | Ga0163163_10008384 | 3300014325 | Bacteria | 9178 |
| 83 | Ga0157377_10004722 | 3300014745 | Bacteria | 6310 |
| 84 | Ga0213876_10017661 | 3300021384 | Bacteria | 3763 |
| 85 | Ga0207653_10002046 | 3300025885 | Bacteria | 6425 |
| 86 | Ga0207699_10033803 | 3300025906 | Bacteria | 2894 |
| 87 | Ga0207705_10039840 | 3300025909 | Bacteria | 3367 |
| 88 | Ga0207684_10000001 | 3300025910 | Bacteria | 1115726 |
| 89 | Ga0207684_10000006 | 3300025910 | Bacteria | 688605 |
| 90 | Ga0207684_10000039 | 3300025910 | Bacteria | 274342 |
| 91 | Ga0207684_10000227 | 3300025910 | Bacteria | 86625 |
| 92 | Ga0207693_10094110 | 3300025915 | Bacteria | 2348 |
| 93 | Ga0207657_10091776 | 3300025919 | Bacteria | 2532 |
| 94 | Ga0207652_10018734 | 3300025921 | Bacteria | 5681 |
| 95 | Ga0207646_10000146 | 3300025922 | Bacteria | 96384 |
| 96 | Ga0207646_10000179 | 3300025922 | Bacteria | 86647 |
| 97 | Ga0207646_10000230 | 3300025922 | Bacteria | 76915 |
| 98 | Ga0207646_10000430 | 3300025922 | Bacteria | 55940 |
| 99 | Ga0207646_10002907 | 3300025922 | Bacteria | 19876 |
| 100 | Ga0207646_10020504 | 3300025922 | Bacteria | 6124 |
| 101 | Ga0207646_10024131 | 3300025922 | Bacteria | 5574 |
| 102 | Ga0207646_10035032 | 3300025922 | Bacteria | 4536 |
| 103 | Ga0207681_10059034 | 3300025923 | Bacteria | 2629 |
| 104 | Ga0207659_10062393 | 3300025926 | Bacteria | 2690 |
| 105 | Ga0207664_10048897 | 3300025929 | Bacteria | 3328 |
| 106 | Ga0207706_10013700 | 3300025933 | Bacteria | 7359 |
| 107 | Ga0207665_10021667 | 3300025939 | Bacteria | 4227 |
| 108 | Ga0207661_10013258 | 3300025944 | Bacteria | 6018 |
| 109 | Ga0207668_10001208 | 3300025972 | Bacteria | 15334 |
| 110 | Ga0207678_10005181 | 3300026067 | Bacteria | 11682 |
| 111 | Ga0207708_10007835 | 3300026075 | Bacteria | 7912 |
| 112 | Ga0207641_10099465 | 3300026088 | Bacteria | 2559 |
| 113 | Ga0207676_10094770 | 3300026095 | Bacteria | 2460 |
| 114 | Ga0207675_100103532 | 3300026118 | Bacteria | 2682 |
| 115 | Ga0209588_1000216 | 3300027671 | Bacteria | 15517 |
| 116 | Ga0268265_10007565 | 3300028380 | Bacteria | 7330 |
| 117 | Ga0268265_10024466 | 3300028380 | Bacteria | 4273 |
| 118 | Ga0307517_10056420 | 3300028786 | Bacteria | 3833 |
| 119 | Ga0307515_10000294 | 3300028794 | Bacteria | 123065 |
| 120 | Ga0307515_10010695 | 3300028794 | Bacteria | 17540 |
| 121 | Ga0307515_10022509 | 3300028794 | Bacteria | 11101 |
| 122 | Ga0307515_10106218 | 3300028794 | Bacteria | 3333 |
| 123 | Ga0307512_10009321 | 3300030522 | Bacteria | 9465 |
| 124 | Ga0307512_10017024 | 3300030522 | Bacteria | 6687 |
| 125 | Ga0307512_10055889 | 3300030522 | Bacteria | 3106 |
| 126 | Ga0307513_10000007 | 3300031456 | Bacteria | 451043 |
| 127 | Ga0307513_10003176 | 3300031456 | Bacteria | 22437 |
| 128 | Ga0307513_10063052 | 3300031456 | Bacteria | 3913 |
| 129 | Ga0307509_10034876 | 3300031507 | Bacteria | 5526 |
| 130 | Ga0307508_10022217 | 3300031616 | Bacteria | 5766 |
| 131 | Ga0307516_10000514 | 3300031730 | Bacteria | 51755 |
| 132 | Ga0307516_10017856 | 3300031730 | Bacteria | 7388 |
| 133 | Ga0307516_10097591 | 3300031730 | Bacteria | 2758 |
| 134 | Ga0307405_10001316 | 3300031731 | Bacteria | 10389 |
| 135 | Ga0307410_10015212 | 3300031852 | Bacteria | 4557 |
| 136 | Ga0307410_10174879 | 3300031852 | Bacteria | 1621 |
| 137 | Ga0307406_10006094 | 3300031901 | Bacteria | 6626 |
| 138 | Ga0307406_10052066 | 3300031901 | Bacteria | 2602 |
| 139 | Ga0307406_10064976 | 3300031901 | Bacteria | 2370 |
| 140 | Ga0307407_10009080 | 3300031903 | Bacteria | 4611 |
| 141 | Ga0307407_10013561 | 3300031903 | Bacteria | 3961 |
| 142 | Ga0307409_100010213 | 3300031995 | Bacteria | 5820 |
| 143 | Ga0307416_100003469 | 3300032002 | Bacteria | 9263 |
| 144 | Ga0307416_100015038 | 3300032002 | Bacteria | 5328 |
| 145 | Ga0307416_100221862 | 3300032002 | Bacteria | 1814 |
| 146 | Ga0307415_100000002 | 3300032126 | Bacteria | 133560 |
| 147 | Ga0307415_100042351 | 3300032126 | Bacteria | 3030 |
| 148 | Ga0373941_0002181 | 3300035115 | Bacteria | 4274 |
| 149 | Ga0373953_0026304 | 3300035117 | Bacteria | 2228 |
| 150 | Ga0373942_0000648 | 3300035207 | Bacteria | 9755 |
| 151 | Ga0373962_0000644 | 3300035242 | Bacteria | 7918 |
| 152 | Ga0373935_0020279 | 3300035692 | Bacteria | 4060 |
| 153 | Ga0395900_0002622 | 3300037418 | Bacteria | 19625 |
| 154 | Ga0395900_0024002 | 3300037418 | Bacteria | 6241 |
| 155 | Ga0395898_0001822 | 3300037466 | Bacteria | 27492 |
| 156 | Ga0395901_0013415 | 3300038443 | Bacteria | 8329 |
| 157 | Ga0436365_0066814 | 3300039437 | Bacteria | 11290 |
| 158 | Ga0439439_0004186 | 3300041406 | Bacteria | 3232 |
| 159 | Ga0439457_004454 | 3300042014 | Bacteria | 3642 |
| 160 | Ga0495629_0062005 | 3300046459 | Bacteria | 2613 |
| 161 | Ga0495594_0080775 | 3300046499 | Bacteria | 1815 |
| 162 | Ga0495606_0001201 | 3300046507 | Bacteria | 36440 |
| 163 | Ga0495668_0000322 | 3300046616 | Bacteria | 65565 |
| 164 | Ga0495683_0052325 | 3300047323 | Bacteria | 2039 |
| 165 | Ga0495684_0201199 | 3300047471 | Bacteria | 1468 |
| 166 | Ga0495626_0000175 | 3300048091 | Bacteria | 79583 |
| 167 | Ga0496105_0025496 | 3300048908 | Bacteria | 4813 |
| 168 | Ga0496108_0000079 | 3300048911 | Bacteria | 103605 |
| 169 | Ga0496108_0007822 | 3300048911 | Bacteria | 8662 |
| 170 | Ga0496110_0006263 | 3300048913 | Bacteria | 9388 |
| 171 | Ga0496112_0060943 | 3300048915 | Bacteria | 3718 |
| 172 | Ga0496113_0027998 | 3300048916 | Bacteria | 4047 |
| 173 | Ga0496126_0210711 | 3300048929 | Bacteria | 1636 |
| 174 | Ga0501036_0108324 | 3300049572 | Bacteria | 2349 |
| 175 | Ga0501038_0066043 | 3300049574 | Bacteria | 3082 |
| 176 | Ga0501046_0038102 | 3300049580 | Bacteria | 3860 |
| 177 | Ga0501047_0011453 | 3300049581 | Bacteria | 8395 |
| 178 | nmdc:mga05p37_5611_c1 | 3300050507 | Bacteria | 14747 |
| 179 | nmdc:mga05p37_9085_c1 | 3300050507 | Bacteria | 11746 |
| 180 | nmdc:mga09592_10880_c1 | 3300050508 | Bacteria | 7404 |
| 181 | nmdc:mga09592_290_c1 | 3300050508 | Bacteria | 36462 |
| 182 | nmdc:mga0qj67_74_c1 | 3300050509 | Bacteria | 40568 |
| 183 | nmdc:mga0qj67_813_c1 | 3300050509 | Bacteria | 21266 |
| 184 | nmdc:mga06r32_30619_c1 | 3300050510 | Bacteria | 5050 |
| 185 | nmdc:mga06r32_377_c1 | 3300050510 | Bacteria | 37475 |
| 186 | nmdc:mga08y16_97905_c1 | 3300050511 | Bacteria | 3055 |
| 187 | nmdc:mga0n895_202471_c1 | 3300050512 | Bacteria | 2016 |
| 188 | nmdc:mga08x19_15218_c1 | 3300050514 | Bacteria | 4679 |
| 189 | Ga0500641_0018117 | 3300053096 | Bacteria | 2644 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300009553 | Ga0105249_10480483 | Ga0105249_104804831 | 413 |
| 2 | 3300047471 | Ga0495684_0201199 | Ga0495684_0201199_141_1454 | 436 |
| 3 | 3300050512 | nmdc:mga0n895_202471_c1 | nmdc:mga0n895_202471_c1_18_1397 | 459 |
| 4 | 3300050509 | nmdc:mga0qj67_813_c1 | nmdc:mga0qj67_813_c1_14000_15433 | 463 |
| 5 | iso_pu_bacteria | 2869048445 | 2869048980 | 473 |
| 6 | 3300028786 | Ga0307517_10056420 | Ga0307517_100564202 | 475 |
| 7 | 3300028794 | Ga0307515_10022509 | Ga0307515_1002250910 | 475 |
| 8 | 3300030522 | Ga0307512_10017024 | Ga0307512_100170242 | 475 |
| 9 | 3300031456 | Ga0307513_10003176 | Ga0307513_1000317618 | 475 |
| 10 | 3300053096 | Ga0500641_0018117 | Ga0500641_0018117_39_1574 | 475 |
| 11 | 3300005536 | Ga0070697_100050768 | Ga0070697_1000507682 | 476 |
| 12 | 3300025922 | Ga0207646_10000230 | Ga0207646_1000023052 | 476 |
| 13 | 3300037418 | Ga0395900_0002622 | Ga0395900_0002622_4544_6082 | 477 |
| 14 | 3300037466 | Ga0395898_0001822 | Ga0395898_0001822_20777_22315 | 477 |
| 15 | 3300038443 | Ga0395901_0013415 | Ga0395901_0013415_3857_5395 | 477 |
| 16 | 3300050508 | nmdc:mga09592_10880_c1 | nmdc:mga09592_10880_c1_2281_3819 | 477 |
| 17 | 3300031456 | Ga0307513_10000007 | Ga0307513_1000000748 | 478 |
| 18 | 3300031730 | Ga0307516_10097591 | Ga0307516_100975912 | 479 |
| 19 | 3300028794 | Ga0307515_10010695 | Ga0307515_100106958 | 487 |
| 20 | 3300025906 | Ga0207699_10033803 | Ga0207699_100338032 | 488 |
| 21 | 3300030522 | Ga0307512_10009321 | Ga0307512_100093216 | 488 |
| 22 | 3300031616 | Ga0307508_10022217 | Ga0307508_100222173 | 489 |
| 23 | 3300028794 | Ga0307515_10106218 | Ga0307515_101062182 | 490 |
| 24 | 3300006028 | Ga0070717_10009101 | Ga0070717_100091013 | 491 |
| 25 | 3300039437 | Ga0436365_0066814 | Ga0436365_0066814_6009_7568 | 491 |
| 26 | 3300005467 | Ga0070706_100000552 | Ga0070706_10000055223 | 492 |
| 27 | 3300005518 | Ga0070699_100001168 | Ga0070699_10000116817 | 492 |
| 28 | 3300021384 | Ga0213876_10017661 | Ga0213876_100176613 | 492 |
| 29 | 3300025910 | Ga0207684_10000006 | Ga0207684_1000000623 | 492 |
| 30 | 3300005435 | Ga0070714_100008235 | Ga0070714_1000082357 | 494 |
| 31 | 3300005467 | Ga0070706_100000156 | Ga0070706_10000015681 | 495 |
| 32 | 3300005468 | Ga0070707_100000078 | Ga0070707_10000007820 | 495 |
| 33 | 3300025910 | Ga0207684_10000001 | Ga0207684_10000001579 | 495 |
| 34 | 3300025910 | Ga0207684_10000227 | Ga0207684_1000022719 | 495 |
| 35 | 3300025922 | Ga0207646_10000179 | Ga0207646_1000017919 | 495 |
| 36 | 3300025922 | Ga0207646_10024131 | Ga0207646_100241312 | 495 |
| 37 | 3300031731 | Ga0307405_10001316 | Ga0307405_100013168 | 495 |
| 38 | 3300031852 | Ga0307410_10015212 | Ga0307410_100152122 | 495 |
| 39 | 3300031903 | Ga0307407_10009080 | Ga0307407_100090802 | 495 |
| 40 | 3300032002 | Ga0307416_100003469 | Ga0307416_1000034696 | 495 |
| 41 | 3300032126 | Ga0307415_100000002 | Ga0307415_10000000263 | 495 |
| 42 | 3300006846 | Ga0075430_100000490 | Ga0075430_10000049016 | 497 |
| 43 | 3300005468 | Ga0070707_100018696 | Ga0070707_1000186963 | 498 |
| 44 | 3300046499 | Ga0495594_0080775 | Ga0495594_0080775_203_1738 | 498 |
| 45 | 3300005435 | Ga0070714_100065276 | Ga0070714_1000652762 | 501 |
| 46 | 3300005435 | Ga0070714_100135850 | Ga0070714_1001358502 | 501 |
| 47 | 3300025929 | Ga0207664_10048897 | Ga0207664_100488973 | 501 |
| 48 | 3300005536 | Ga0070697_100070023 | Ga0070697_1000700233 | 502 |
| 49 | 3300007265 | Ga0099794_10000181 | Ga0099794_1000018117 | 502 |
| 50 | 3300027671 | Ga0209588_1000216 | Ga0209588_10002163 | 502 |
| 51 | 3300041406 | Ga0439439_0004186 | Ga0439439_0004186_739_2277 | 502 |
| 52 | 3300042014 | Ga0439457_004454 | Ga0439457_004454_806_2344 | 502 |
| 53 | 3300005468 | Ga0070707_100003484 | Ga0070707_1000034849 | 504 |
| 54 | 3300025922 | Ga0207646_10000430 | Ga0207646_1000043035 | 504 |
| 55 | 3300032126 | Ga0307415_100042351 | Ga0307415_1000423512 | 504 |
| 56 | 3300025922 | Ga0207646_10000146 | Ga0207646_1000014697 | 505 |
| 57 | 3300005329 | Ga0070683_100000515 | Ga0070683_10000051519 | 507 |
| 58 | 3300025944 | Ga0207661_10013258 | Ga0207661_100132584 | 507 |
| 59 | iso_pu_bacteria | 2751185782 | 2753272360 | 507 |
| 60 | iso_pu_bacteria | 2831935698 | 2831937519 | 507 |
| 61 | iso_pu_bacteria | 2832004796 | 2832009039 | 507 |
| 62 | iso_pu_bacteria | 2866065130 | 2866068380 | 507 |
| 63 | iso_pu_bacteria | 2867302475 | 2867306400 | 507 |
| 64 | iso_pu_bacteria | 2867312974 | 2867315849 | 507 |
| 65 | iso_pu_bacteria | 2867319477 | 2867323684 | 507 |
| 66 | iso_pu_bacteria | 2867507094 | 2867510985 | 507 |
| 67 | iso_pu_bacteria | 2887478801 | 2887483868 | 507 |
| 68 | iso_pu_bacteria | 8001781756 | 8001783652 | 507 |
| 69 | iso_pu_bacteria | 2501939600 | 2501942547 | 508 |
| 70 | iso_pu_bacteria | 2515154088 | 2515493568 | 508 |
| 71 | iso_pu_bacteria | 2515154129 | 2515722446 | 508 |
| 72 | iso_pu_bacteria | 2515154137 | 2515758498 | 508 |
| 73 | iso_pu_bacteria | 2515154202 | 2516082543 | 508 |
| 74 | iso_pu_bacteria | 2515154203 | 2516087894 | 508 |
| 75 | iso_pu_bacteria | 2622736626 | 2623586994 | 508 |
| 76 | iso_pu_bacteria | 2675903059 | 2676480605 | 508 |
| 77 | iso_pu_bacteria | 2772190715 | 2772642336 | 508 |
| 78 | iso_pu_bacteria | 2855670206 | 2855671288 | 508 |
| 79 | iso_pu_bacteria | 2855676851 | 2855682555 | 508 |
| 80 | iso_pu_bacteria | 2855683550 | 2855689196 | 508 |
| 81 | iso_pu_bacteria | 2856858025 | 2856860837 | 508 |
| 82 | iso_pu_bacteria | 2857288857 | 2857291984 | 508 |
| 83 | iso_pu_bacteria | 2858848962 | 2858850772 | 508 |
| 84 | iso_pu_bacteria | 2858882152 | 2858883855 | 508 |
| 85 | iso_pu_bacteria | 2858888857 | 2858889992 | 508 |
| 86 | iso_pu_bacteria | 2858895516 | 2858900847 | 508 |
| 87 | iso_pu_bacteria | 2858902515 | 2858903577 | 508 |
| 88 | iso_pu_bacteria | 2869061728 | 2869063707 | 508 |
| 89 | iso_pu_bacteria | 2869068681 | 2869070928 | 508 |
| 90 | iso_pu_bacteria | 2880489317 | 2880493276 | 508 |
| 91 | iso_pu_bacteria | 2880495981 | 2880499019 | 508 |
| 92 | iso_pu_bacteria | 2902582711 | 2902587235 | 508 |
| 93 | iso_pu_bacteria | 2929219909 | 2929221047 | 508 |
| 94 | iso_pu_bacteria | 2929226422 | 2929227610 | 508 |
| 95 | iso_pu_bacteria | 2996221748 | 2996222450 | 508 |
| 96 | iso_pu_bacteria | 649633069 | 649811587 | 508 |
| 97 | iso_pu_bacteria | 8003830390 | 8003833449 | 508 |
| 98 | iso_pu_bacteria | 8003856774 | 8003858594 | 508 |
| 99 | iso_pu_bacteria | 8003870546 | 8003877504 | 508 |
| 100 | iso_pu_bacteria | 8054704163 | 8054705025 | 508 |
| 101 | iso_pu_bacteria | 8054727385 | 8054727398 | 508 |
| 102 | iso_pu_bacteria | 8054734606 | 8054734846 | 508 |
| 103 | iso_pu_bacteria | 8055412473 | 8055413665 | 508 |
| 104 | iso_pu_bacteria | 8056054917 | 8056056252 | 508 |
| 105 | 3300006028 | Ga0070717_10000009 | Ga0070717_10000009177 | 509 |
| 106 | 3300046459 | Ga0495629_0062005 | Ga0495629_0062005_470_1999 | 509 |
| 107 | 3300005445 | Ga0070708_100000346 | Ga0070708_10000034621 | 510 |
| 108 | 3300005445 | Ga0070708_100047547 | Ga0070708_1000475473 | 510 |
| 109 | 3300005467 | Ga0070706_100003745 | Ga0070706_1000037453 | 510 |
| 110 | 3300005467 | Ga0070706_100004003 | Ga0070706_10000400318 | 510 |
| 111 | 3300005468 | Ga0070707_100162604 | Ga0070707_1001626042 | 510 |
| 112 | 3300005468 | Ga0070707_100212150 | Ga0070707_1002121502 | 510 |
| 113 | 3300005518 | Ga0070699_100000636 | Ga0070699_10000063626 | 510 |
| 114 | 3300005518 | Ga0070699_100000700 | Ga0070699_10000070021 | 510 |
| 115 | 3300005536 | Ga0070697_100002240 | Ga0070697_1000022404 | 510 |
| 116 | 3300005536 | Ga0070697_100003603 | Ga0070697_1000036038 | 510 |
| 117 | 3300005536 | Ga0070697_100029071 | Ga0070697_1000290712 | 510 |
| 118 | 3300005536 | Ga0070697_100051803 | Ga0070697_1000518033 | 510 |
| 119 | 3300005549 | Ga0070704_100003109 | Ga0070704_1000031098 | 510 |
| 120 | 3300005549 | Ga0070704_100128430 | Ga0070704_1001284301 | 510 |
| 121 | 3300005614 | Ga0068856_100143333 | Ga0068856_1001433332 | 510 |
| 122 | 3300005618 | Ga0068864_100004224 | Ga0068864_10000422410 | 510 |
| 123 | 3300005841 | Ga0068863_100057276 | Ga0068863_1000572762 | 510 |
| 124 | 3300005842 | Ga0068858_100089918 | Ga0068858_1000899182 | 510 |
| 125 | 3300014325 | Ga0163163_10008384 | Ga0163163_100083842 | 510 |
| 126 | 3300025885 | Ga0207653_10002046 | Ga0207653_100020464 | 510 |
| 127 | 3300025910 | Ga0207684_10000039 | Ga0207684_10000039178 | 510 |
| 128 | 3300025915 | Ga0207693_10094110 | Ga0207693_100941102 | 510 |
| 129 | 3300025922 | Ga0207646_10002907 | Ga0207646_1000290713 | 510 |
| 130 | 3300025922 | Ga0207646_10020504 | Ga0207646_100205043 | 510 |
| 131 | 3300025922 | Ga0207646_10035032 | Ga0207646_100350322 | 510 |
| 132 | 3300025939 | Ga0207665_10021667 | Ga0207665_100216673 | 510 |
| 133 | 3300026088 | Ga0207641_10099465 | Ga0207641_100994652 | 510 |
| 134 | 3300026095 | Ga0207676_10094770 | Ga0207676_100947702 | 510 |
| 135 | 3300048908 | Ga0496105_0025496 | Ga0496105_0025496_2223_3755 | 510 |
| 136 | 3300048911 | Ga0496108_0000079 | Ga0496108_0000079_38014_39546 | 510 |
| 137 | 3300048911 | Ga0496108_0007822 | Ga0496108_0007822_2417_3949 | 510 |
| 138 | 3300048913 | Ga0496110_0006263 | Ga0496110_0006263_5891_7423 | 510 |
| 139 | 3300048916 | Ga0496113_0027998 | Ga0496113_0027998_1296_2828 | 510 |
| 140 | 3300050514 | nmdc:mga08x19_15218_c1 | nmdc:mga08x19_15218_c1_254_1786 | 510 |
| 141 | 3300003203 | JGI25406J46586_10000951 | JGI25406J46586_1000095112 | 511 |
| 142 | 3300005329 | Ga0070683_100004203 | Ga0070683_1000042035 | 511 |
| 143 | 3300005338 | Ga0068868_100037921 | Ga0068868_1000379214 | 511 |
| 144 | 3300005339 | Ga0070660_100099729 | Ga0070660_1000997292 | 511 |
| 145 | 3300005339 | Ga0070660_100127268 | Ga0070660_1001272682 | 511 |
| 146 | 3300005347 | Ga0070668_100001900 | Ga0070668_1000019005 | 511 |
| 147 | 3300005347 | Ga0070668_100009535 | Ga0070668_1000095352 | 511 |
| 148 | 3300005354 | Ga0070675_100003703 | Ga0070675_1000037032 | 511 |
| 149 | 3300005366 | Ga0070659_100014932 | Ga0070659_1000149322 | 511 |
| 150 | 3300005441 | Ga0070700_100003470 | Ga0070700_1000034702 | 511 |
| 151 | 3300005455 | Ga0070663_100002214 | Ga0070663_1000022148 | 511 |
| 152 | 3300005457 | Ga0070662_100003119 | Ga0070662_1000031198 | 511 |
| 153 | 3300005530 | Ga0070679_100042923 | Ga0070679_1000429234 | 511 |
| 154 | 3300005535 | Ga0070684_100025697 | Ga0070684_1000256973 | 511 |
| 155 | 3300005564 | Ga0070664_100005216 | Ga0070664_10000521613 | 511 |
| 156 | 3300005616 | Ga0068852_100043854 | Ga0068852_1000438544 | 511 |
| 157 | 3300005618 | Ga0068864_100184008 | Ga0068864_1001840082 | 511 |
| 158 | 3300005841 | Ga0068863_100031901 | Ga0068863_1000319014 | 511 |
| 159 | 3300005843 | Ga0068860_100065853 | Ga0068860_1000658533 | 511 |
| 160 | 3300005844 | Ga0068862_100012933 | Ga0068862_1000129333 | 511 |
| 161 | 3300005844 | Ga0068862_100025583 | Ga0068862_1000255833 | 511 |
| 162 | 3300005844 | Ga0068862_100041943 | Ga0068862_1000419432 | 511 |
| 163 | 3300005983 | Ga0081540_1004442 | Ga0081540_10044427 | 511 |
| 164 | 3300005983 | Ga0081540_1008323 | Ga0081540_10083238 | 511 |
| 165 | 3300005985 | Ga0081539_10000456 | Ga0081539_1000045662 | 511 |
| 166 | 3300005985 | Ga0081539_10003907 | Ga0081539_100039074 | 511 |
| 167 | 3300005985 | Ga0081539_10005425 | Ga0081539_1000542513 | 511 |
| 168 | 3300005985 | Ga0081539_10005928 | Ga0081539_100059284 | 511 |
| 169 | 3300005985 | Ga0081539_10062619 | Ga0081539_100626192 | 511 |
| 170 | 3300006844 | Ga0075428_100000504 | Ga0075428_10000050435 | 511 |
| 171 | 3300006844 | Ga0075428_100001963 | Ga0075428_10000196314 | 511 |
| 172 | 3300006844 | Ga0075428_100029869 | Ga0075428_1000298695 | 511 |
| 173 | 3300006846 | Ga0075430_100024981 | Ga0075430_1000249813 | 511 |
| 174 | 3300006846 | Ga0075430_100040364 | Ga0075430_1000403643 | 511 |
| 175 | 3300006847 | Ga0075431_100001049 | Ga0075431_1000010495 | 511 |
| 176 | 3300006847 | Ga0075431_100036725 | Ga0075431_1000367253 | 511 |
| 177 | 3300006847 | Ga0075431_100046254 | Ga0075431_1000462542 | 511 |
| 178 | 3300006880 | Ga0075429_100005348 | Ga0075429_10000534813 | 511 |
| 179 | 3300009094 | Ga0111539_10014346 | Ga0111539_100143466 | 511 |
| 180 | 3300009147 | Ga0114129_10000010 | Ga0114129_10000010109 | 511 |
| 181 | 3300009147 | Ga0114129_10002589 | Ga0114129_1000258924 | 511 |
| 182 | 3300009147 | Ga0114129_10003865 | Ga0114129_100038659 | 511 |
| 183 | 3300009147 | Ga0114129_10280289 | Ga0114129_102802892 | 511 |
| 184 | 3300009177 | Ga0105248_10277667 | Ga0105248_102776672 | 511 |
| 185 | 3300010375 | Ga0105239_10103476 | Ga0105239_101034762 | 511 |
| 186 | 3300013105 | Ga0157369_10116952 | Ga0157369_101169521 | 511 |
| 187 | 3300014745 | Ga0157377_10004722 | Ga0157377_100047222 | 511 |
| 188 | 3300025909 | Ga0207705_10039840 | Ga0207705_100398402 | 511 |
| 189 | 3300025919 | Ga0207657_10091776 | Ga0207657_100917762 | 511 |
| 190 | 3300025921 | Ga0207652_10018734 | Ga0207652_100187347 | 511 |
| 191 | 3300025923 | Ga0207681_10059034 | Ga0207681_100590342 | 511 |
| 192 | 3300025926 | Ga0207659_10062393 | Ga0207659_100623932 | 511 |
| 193 | 3300025933 | Ga0207706_10013700 | Ga0207706_100137005 | 511 |
| 194 | 3300025972 | Ga0207668_10001208 | Ga0207668_100012085 | 511 |
| 195 | 3300026067 | Ga0207678_10005181 | Ga0207678_100051816 | 511 |
| 196 | 3300026075 | Ga0207708_10007835 | Ga0207708_100078358 | 511 |
| 197 | 3300026118 | Ga0207675_100103532 | Ga0207675_1001035323 | 511 |
| 198 | 3300028380 | Ga0268265_10007565 | Ga0268265_100075653 | 511 |
| 199 | 3300028380 | Ga0268265_10024466 | Ga0268265_100244661 | 511 |
| 200 | 3300028794 | Ga0307515_10000294 | Ga0307515_1000029418 | 511 |
| 201 | 3300030522 | Ga0307512_10055889 | Ga0307512_100558892 | 511 |
| 202 | 3300031456 | Ga0307513_10063052 | Ga0307513_100630522 | 511 |
| 203 | 3300031507 | Ga0307509_10034876 | Ga0307509_100348765 | 511 |
| 204 | 3300031730 | Ga0307516_10000514 | Ga0307516_1000051442 | 511 |
| 205 | 3300031730 | Ga0307516_10017856 | Ga0307516_100178563 | 511 |
| 206 | 3300031852 | Ga0307410_10174879 | Ga0307410_101748791 | 511 |
| 207 | 3300031901 | Ga0307406_10006094 | Ga0307406_100060942 | 511 |
| 208 | 3300031901 | Ga0307406_10052066 | Ga0307406_100520662 | 511 |
| 209 | 3300031901 | Ga0307406_10064976 | Ga0307406_100649762 | 511 |
| 210 | 3300031903 | Ga0307407_10013561 | Ga0307407_100135614 | 511 |
| 211 | 3300031995 | Ga0307409_100010213 | Ga0307409_1000102132 | 511 |
| 212 | 3300032002 | Ga0307416_100015038 | Ga0307416_1000150384 | 511 |
| 213 | 3300032002 | Ga0307416_100221862 | Ga0307416_1002218622 | 511 |
| 214 | 3300035115 | Ga0373941_0002181 | Ga0373941_0002181_865_2400 | 511 |
| 215 | 3300035117 | Ga0373953_0026304 | Ga0373953_0026304_84_1634 | 511 |
| 216 | 3300035207 | Ga0373942_0000648 | Ga0373942_0000648_6542_8077 | 511 |
| 217 | 3300035242 | Ga0373962_0000644 | Ga0373962_0000644_914_2449 | 511 |
| 218 | 3300035692 | Ga0373935_0020279 | Ga0373935_0020279_1096_2634 | 511 |
| 219 | 3300037418 | Ga0395900_0024002 | Ga0395900_0024002_4330_5865 | 511 |
| 220 | 3300046507 | Ga0495606_0001201 | Ga0495606_0001201_5313_6848 | 511 |
| 221 | 3300046616 | Ga0495668_0000322 | Ga0495668_0000322_17033_18568 | 511 |
| 222 | 3300047323 | Ga0495683_0052325 | Ga0495683_0052325_358_1893 | 511 |
| 223 | 3300048091 | Ga0495626_0000175 | Ga0495626_0000175_50233_51768 | 511 |
| 224 | 3300048915 | Ga0496112_0060943 | Ga0496112_0060943_109_1647 | 511 |
| 225 | 3300048929 | Ga0496126_0210711 | Ga0496126_0210711_56_1594 | 511 |
| 226 | 3300049572 | Ga0501036_0108324 | Ga0501036_0108324_460_1998 | 511 |
| 227 | 3300049574 | Ga0501038_0066043 | Ga0501038_0066043_573_2111 | 511 |
| 228 | 3300049580 | Ga0501046_0038102 | Ga0501046_0038102_2178_3716 | 511 |
| 229 | 3300049581 | Ga0501047_0011453 | Ga0501047_0011453_3339_4886 | 511 |
| 230 | 3300050507 | nmdc:mga05p37_5611_c1 | nmdc:mga05p37_5611_c1_8832_10367 | 511 |
| 231 | 3300050507 | nmdc:mga05p37_9085_c1 | nmdc:mga05p37_9085_c1_3304_4839 | 511 |
| 232 | 3300050508 | nmdc:mga09592_290_c1 | nmdc:mga09592_290_c1_26935_28470 | 511 |
| 233 | 3300050509 | nmdc:mga0qj67_74_c1 | nmdc:mga0qj67_74_c1_27062_28597 | 511 |
| 234 | 3300050510 | nmdc:mga06r32_30619_c1 | nmdc:mga06r32_30619_c1_2354_3889 | 511 |
| 235 | 3300050510 | nmdc:mga06r32_377_c1 | nmdc:mga06r32_377_c1_29807_31342 | 511 |
| 236 | 3300050511 | nmdc:mga08y16_97905_c1 | nmdc:mga08y16_97905_c1_607_2151 | 511 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7tqr-assembly1.cif.gz_A | crystal structure of histidine ammonia lyase from thermoplasma acidophilum | 0.9412 | 1 | 502 |
| 6v6h-assembly1.cif.gz_A | crystal structure of histidine ammonia-lyase from trypanosoma cruzi | 0.9359 | 1 | 507 |
| 7tqr-assembly1.cif.gz_A | crystal structure of histidine ammonia lyase from thermoplasma acidophilum | 0.9355 | 1 | 502 |
| 6v6h-assembly1.cif.gz_B | crystal structure of histidine ammonia-lyase from trypanosoma cruzi | 0.9344 | 1 | 507 |
| 6v6h-assembly1.cif.gz_D | crystal structure of histidine ammonia-lyase from trypanosoma cruzi | 0.9336 | 1 | 507 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 2ohyB01 | Mainly Alpha;Orthogonal Bundle;Fumarase C; Chain B, domain 1;Fumarase/aspartase (N-terminal domain) | 0.9259 | 1 | 197 | 1.10.275.10 |
| af_Q4E133_201_513_1.20.200.10 | Mainly Alpha;Up-down Bundle;Fumarase C; Chain A, domain 2;Fumarase/aspartase (Central domain) | 0.9248 | 201 | 507 | 1.20.200.10 |
| 1eb4A02 | Mainly Alpha;Up-down Bundle;Fumarase C; Chain A, domain 2;Fumarase/aspartase (Central domain) | 0.9228 | 201 | 502 | 1.20.200.10 |
| 2ohyB01 | Mainly Alpha;Orthogonal Bundle;Fumarase C; Chain B, domain 1;Fumarase/aspartase (N-terminal domain) | 0.9213 | 1 | 197 | 1.10.275.10 |
| af_Q4E133_1_200_1.10.275.10 | Mainly Alpha;Orthogonal Bundle;Fumarase C; Chain B, domain 1;Fumarase/aspartase (N-terminal domain) | 0.9127 | 1 | 198 | 1.10.275.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A538MTL4-F1-model_v4 | Histidine ammonia-lyase (EC 4.3.1.3) | 0.9704 | 2 | 511 |
GO:0004397
GO:0005737 GO:0019556 GO:0019557 |
| AF-A0A7L6BCC4-F1-model_v4 | Histidine ammonia-lyase (EC 4.3.1.3) | 0.9702 | 1 | 511 |
GO:0004397
GO:0005737 GO:0019556 GO:0019557 |
| AF-A0A542XHB1-F1-model_v4 | Histidine ammonia-lyase (EC 4.3.1.3) | 0.9699 | 2 | 511 |
GO:0004397
GO:0005737 GO:0019556 GO:0019557 |
| AF-A0A124G8W8-F1-model_v4 | Histidine ammonia-lyase (EC 4.3.1.3) | 0.9692 | 1 | 511 |
GO:0004397
GO:0005737 GO:0019556 GO:0019557 |
| AF-A0A7L6BCC4-F1-model_v4 | Histidine ammonia-lyase (EC 4.3.1.3) | 0.9683 | 1 | 511 |
GO:0004397
GO:0005737 GO:0019556 GO:0019557 |
Predicted Structure (AlphaFold2)
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