F347626

General Info

Members Datasets Scaffolds Average Seq Length
234 180 206 369

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2904434214|2904435546
Length 419
Sequence ADFAYMQRALALAERGMYTTTPNPRVGCVLIKDGNIIGEGFTQPAGQDHAEVQALKDARSRGISPEGATAYVTLEPCSHFGRTPPCARTLVEAGVARVIAAMEDPNPAVSGRGLAILRQAGIDVRCGLLEKAAAEMNIGFISRMTRRRPWVRLKAAASLDGFTALPSGESQWITGEAARQDGHRWRARACAILTGAGTARQDDPQLTVRGVETPRQPLRVLVDSRLTVPPTARLLDGAPPLIVHAGPPAAANPDDPAEVALAAAKAVLMDNRQSGDVHDPHPHHLATIDPSRDAFLARAEALQARGAELVALPNEAGKVDLPGLMRLLGDRGINELHVEAGTKLSGSLIREGCVDEWLIYLAPSLLGRGFGLFDMPAAGRLIDRRQLVFDSVERIGDDIRILARAVGGNETNAETRDAT

Samples

Sample ID Description Type Environment
1 2510065053 Pseudomonas sp. MOIL14HWK12:I1 Isolate Rhizosphere
2 2510065055 Pseudomonas sp. MOIL14HWK12:I2 Isolate Rhizosphere
3 2510065058 Pseudomonas oleovorans MOIL14HWK12 Isolate Rhizosphere
4 2513237150 Cupriavidus taiwanensis STM6018 Isolate Nodule
5 2513237165 Cupriavidus neocaledonicus STM6070 Isolate Nodule
6 2526164512 Azovibrio restrictus DSM 23866 Isolate Unclassified
7 2547132512 Azospira oryzae 6a3 Isolate Unclassified
8 2574179768 Azoarcus communis DSM 12120 Isolate Unclassified
9 2643221570 Acidovorax sp. Root568 Isolate Unclassified
10 2643221596 Acidovorax sp. Root70 Isolate Unclassified
11 2734482258 Glomeribacter sp. phylotype 3 Isolate Unclassified
12 2773857672 Pseudomonas sp. 1766 Isolate Unclassified
13 2834641062 Cupriavidus gilardii JZ4 Isolate Unclassified
14 2891633521 Azoarcus rhizosphaerae CC-YHH848 Isolate Rhizosphere
15 2904434214 Robbsia andropogonis 1567 Isolate Rhizosphere
16 2917832318 Pseudomonas rhizoryzae RY24 Isolate Unclassified
17 2919125081 Pseudomonas psychrotolerans 1545 Isolate Rhizosphere
18 2932422444 Comamonas sp. 4034 Isolate Rhizosphere
19 2974298342 Pseudomonas sp. SORGH_AS 211 Isolate Unclassified
20 2984499530 Pseudomonas sp. SORGH_AS199 Isolate Aerial Root
21 2984504281 Pseudomonas psychrotolerans SORGH_AS201 Isolate Aerial Root
22 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere
23 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
24 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
25 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
26 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
27 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
28 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
29 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
30 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
31 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
32 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
33 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
34 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
35 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
36 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
37 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
38 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
39 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
40 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
48 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
51 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
57 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
58 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
59 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
63 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
64 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
65 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
67 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
68 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
69 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
70 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
87 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
91 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
92 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
93 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
94 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
95 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
96 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
97 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
98 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
99 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
100 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
101 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
102 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
103 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
104 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
105 3300044666 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1E Metagenome Unclassified
106 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
107 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
108 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
109 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
110 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
111 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
112 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
113 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
114 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
115 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
116 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
117 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
118 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
119 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
120 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
121 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
122 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
123 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
124 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
125 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
126 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
127 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
128 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
129 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
130 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
131 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
132 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
133 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
134 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
135 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
136 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
137 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
138 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
139 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
140 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
141 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
142 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
143 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
144 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
145 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
146 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
147 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
148 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
149 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
150 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
151 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
152 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
153 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
154 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
155 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
163 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
164 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
165 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
166 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
167 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
168 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
169 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
170 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
171 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
172 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
173 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
174 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
175 639633007 Azoarcus olearius BH72 Isolate Unclassified
176 644736347 Cupriavidus taiwanensis LMG 19424 Isolate Nodule
177 8003400568 Cupriavidus gilardii USM5 Isolate Rhizosphere
178 8016728285 Pseudomonas psychrotolerans SORGH_AS 227 Isolate Unclassified
179 8039098773 Burkholderia multivorans MSMB612WGS Isolate Unclassified
180 8040167225 Burkholderia vietnamiensis RS1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 88.03
Metatranscriptomes 0
Isolates 11.97

Biome Distribution

Category Percentage (%)
Aerial Root 0.85
Bulb 0
Endosphere 11.97
Nodule 2.14
Rhizoplane 2.14
Rhizosphere 72.22
Stem 0
Stem Tuber 0
Unclassified 10.68

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10000587 3300003187 Bacteria 32303
2 JGI25151J46595_10011109 3300003187 Bacteria 4151
3 rootL2_10245197 3300003322 Bacteria 2010
4 Ga0055526_1013179 3300003771 Bacteria 3522
5 Ga0055524_1000431 3300003775 Bacteria 35131
6 Ga0055524_1000508 3300003775 Bacteria 30342
7 Ga0055524_1003391 3300003775 Bacteria 7751
8 Ga0055536_1000022 3300003781 Bacteria 198244
9 Ga0055534_1000370 3300003784 Bacteria 28195
10 Ga0055534_1005314 3300003784 Bacteria 3474
11 Ga0070670_100000064 3300005331 Bacteria 110044
12 Ga0070666_10003552 3300005335 Bacteria 9455
13 Ga0070669_100002544 3300005353 Bacteria 13184
14 Ga0070671_100000025 3300005355 Bacteria 121912
15 Ga0070671_100043010 3300005355 Bacteria 3756
16 Ga0070673_100055737 3300005364 Bacteria 3115
17 Ga0070688_100004678 3300005365 Bacteria 7144
18 Ga0070667_100000095 3300005367 Bacteria 109595
19 Ga0070709_10080203 3300005434 Bacteria 2127
20 Ga0070678_100200176 3300005456 Bacteria 1648
21 Ga0070685_10000005 3300005466 Bacteria 190119
22 Ga0068853_100174987 3300005539 Bacteria 1944
23 Ga0070665_100212752 3300005548 Bacteria 1934
24 Ga0068859_100224098 3300005617 Bacteria 1968
25 Ga0068864_100000073 3300005618 Bacteria 109681
26 Ga0068864_100039293 3300005618 Bacteria 4044
27 Ga0068863_100021113 3300005841 Bacteria 6220
28 Ga0068863_100084046 3300005841 Bacteria 3017
29 Ga0068863_100100540 3300005841 Bacteria 2749
30 Ga0068858_100436962 3300005842 Bacteria 1260
31 Ga0068860_100000326 3300005843 Bacteria 64692
32 Ga0068862_100002886 3300005844 Bacteria 15044
33 Ga0081539_10009698 3300005985 Bacteria 7973
34 Ga0097621_100039430 3300006237 Bacteria 3794
35 Ga0097620_100224086 3300006931 Bacteria 1968
36 Ga0099826_10000016 3300006948 Bacteria 210934
37 Ga0105251_10051353 3300009011 Bacteria 1966
38 Ga0111539_10236007 3300009094 Bacteria 2129
39 Ga0105247_10013272 3300009101 Bacteria 4944
40 Ga0105248_10032070 3300009177 Bacteria 5871
41 Ga0105249_10025967 3300009553 Bacteria 5275
42 Ga0157371_10005446 3300013102 Bacteria 10728
43 Ga0157369_10010913 3300013105 Bacteria 10344
44 Ga0157369_10077781 3300013105 Bacteria 3556
45 Ga0157374_10000231 3300013296 Bacteria 51766
46 Ga0157378_10011732 3300013297 Bacteria 7671
47 Ga0163163_10000230 3300014325 Bacteria 57639
48 Ga0163163_10231130 3300014325 Bacteria 1898
49 Ga0163163_10375359 3300014325 Bacteria 1479
50 Ga0157379_10085116 3300014968 Bacteria 2833
51 Ga0157376_10025434 3300014969 Bacteria 4662
52 Ga0209565_1000155 3300025263 Bacteria 92207
53 Ga0209565_1002324 3300025263 Bacteria 6961
54 Ga0209675_1000070 3300025291 Bacteria 169161
55 Ga0209675_1009004 3300025291 Bacteria 3582
56 Ga0209675_1015443 3300025291 Bacteria 2267
57 Ga0209676_1000012 3300025292 Bacteria 841431
58 Ga0209025_1000124 3300025294 Bacteria 201973
59 Ga0209025_1000504 3300025294 Bacteria 75030
60 Ga0209025_1000524 3300025294 Bacteria 73057
61 Ga0209025_1015333 3300025294 Bacteria 4631
62 Ga0209564_1000350 3300025295 Bacteria 86762
63 Ga0209564_1000380 3300025295 Bacteria 81287
64 Ga0209564_1001372 3300025295 Bacteria 25494
65 Ga0209758_1005172 3300025297 Bacteria 10263
66 Ga0209256_1000059 3300025299 Bacteria 272170
67 Ga0209256_1000149 3300025299 Bacteria 146390
68 Ga0209051_1005772 3300025303 Bacteria 7135
69 Ga0207697_10035968 3300025315 Bacteria 2028
70 Ga0207713_1062915 3300025735 Bacteria 1404
71 Ga0207680_10056464 3300025903 Bacteria 2371
72 Ga0207681_10000156 3300025923 Bacteria 56382
73 Ga0207650_10000106 3300025925 Bacteria 110058
74 Ga0207650_10027618 3300025925 Bacteria 4064
75 Ga0207644_10000049 3300025931 Bacteria 95260
76 Ga0207644_10002671 3300025931 Bacteria 11485
77 Ga0207686_10101851 3300025934 Unclassified 1919
78 Ga0207711_10001196 3300025941 Bacteria 24599
79 Ga0207711_10240017 3300025941 Bacteria 1661
80 Ga0207651_10063788 3300025960 Bacteria 2575
81 Ga0207658_10000073 3300025986 Bacteria 111738
82 Ga0207639_10129610 3300026041 Bacteria 2086
83 Ga0207639_10209091 3300026041 Bacteria 1678
84 Ga0207641_10063213 3300026088 Bacteria 3161
85 Ga0207648_10106981 3300026089 Bacteria 2455
86 Ga0207676_10000010 3300026095 Bacteria 519402
87 Ga0207676_10034250 3300026095 Bacteria 3845
88 Ga0207675_100321349 3300026118 Bacteria 1511
89 Ga0209282_1000064 3300027666 Bacteria 91973
90 Ga0268266_10022816 3300028379 Bacteria 5327
91 Ga0268266_10114690 3300028379 Bacteria 2391
92 Ga0268265_10003355 3300028380 Bacteria 11563
93 Ga0268264_10000123 3300028381 Bacteria 189361
94 Ga0265324_10019354 3300029957 Bacteria 2453
95 Ga0265332_10000039 3300031238 Bacteria 128373
96 Ga0265328_10000120 3300031239 Bacteria 37260
97 Ga0265331_10026777 3300031250 Bacteria 2895
98 Ga0265331_10067348 3300031250 Bacteria 1680
99 Ga0265327_10000094 3300031251 Bacteria 195099
100 Ga0265327_10009775 3300031251 Bacteria 6860
101 Ga0265327_10037584 3300031251 Bacteria 2649
102 Ga0307509_10000018 3300031507 Bacteria 258998
103 Ga0307411_10171358 3300032005 Bacteria 1637
104 Ga0307415_100243051 3300032126 Bacteria 1457
105 Ga0316583_10001643 3300032133 Bacteria 7567
106 Ga0373960_0022668 3300035121 Bacteria 1684
107 Ga0373925_0027715 3300037068 Bacteria 4147
108 Ga0436365_0599013 3300039437 Bacteria 4189
109 Ga0439436_0015620 3300041404 Bacteria 2282
110 Ga0451577_0000013 3300042876 Bacteria 550689
111 Ga0451577_0008244 3300042876 Bacteria 10151
112 Ga0451577_0018090 3300042876 Bacteria 6496
113 Ga0451577_0112072 3300042876 Bacteria 2441
114 Ga0451577_0150864 3300042876 Bacteria 2091
115 Ga0451577_0366284 3300042876 Bacteria 1307
116 Ga0466969_0072150 3300044656 Bacteria 1659
117 Ga0466977_0000795 3300044666 Bacteria 11523
118 Ga0453683_0000033 3300044673 Bacteria 241479
119 Ga0453683_0126902 3300044673 Bacteria 1607
120 Ga0466961_0117100 3300044693 Bacteria 1674
121 Ga0453684_0000029 3300044712 Bacteria 757969
122 Ga0453684_0000085 3300044712 Bacteria 397817
123 Ga0453684_0000677 3300044712 Bacteria 122140
124 Ga0453684_0005030 3300044712 Bacteria 26843
125 Ga0453684_0029199 3300044712 Bacteria 7842
126 Ga0451576_0000018 3300045051 Bacteria 550689
127 Ga0451576_0000174 3300045051 Bacteria 162062
128 Ga0451576_0002224 3300045051 Bacteria 29850
129 Ga0451576_0003600 3300045051 Bacteria 21067
130 Ga0451576_0007940 3300045051 Bacteria 12555
131 Ga0451576_0015649 3300045051 Bacteria 8395
132 Ga0451576_0042042 3300045051 Bacteria 4826
133 Ga0451576_0053376 3300045051 Bacteria 4234
134 Ga0451576_0105668 3300045051 Bacteria 2929
135 Ga0451576_0108336 3300045051 Bacteria 2891
136 Ga0466958_0084481 3300045836 Bacteria 1958
137 Ga0495603_0002700 3300046455 Bacteria 10464
138 Ga0495629_0004428 3300046459 Bacteria 10523
139 Ga0495629_0004573 3300046459 Bacteria 10352
140 Ga0495653_0018625 3300046463 Bacteria 5636
141 Ga0495650_0003069 3300046471 Bacteria 12553
142 Ga0495580_0056883 3300046472 Bacteria 2753
143 Ga0495580_0099080 3300046472 Bacteria 2027
144 Ga0495605_0002305 3300046474 Bacteria 11907
145 Ga0495662_0035510 3300046476 Bacteria 2405
146 Ga0495664_0007232 3300046477 Bacteria 6157
147 Ga0495596_0000048 3300046500 Bacteria 88427
148 Ga0495606_0047780 3300046507 Bacteria 2820
149 Ga0495610_0001040 3300046512 Bacteria 25473
150 Ga0495628_0008473 3300046516 Bacteria 8816
151 Ga0495652_0016759 3300046529 Bacteria 6549
152 Ga0495654_0050870 3300046530 Bacteria 2023
153 Ga0495665_0002464 3300046531 Bacteria 9999
154 Ga0495586_0022555 3300046535 Bacteria 3360
155 Ga0495609_0001205 3300046538 Bacteria 17804
156 Ga0495597_0002295 3300046542 Bacteria 12418
157 Ga0495645_0055728 3300046543 Bacteria 2870
158 Ga0495633_0002752 3300046558 Bacteria 12160
159 Ga0495623_0014837 3300046679 Bacteria 5038
160 Ga0495646_0012470 3300046680 Bacteria 5405
161 Ga0495624_0008336 3300046690 Bacteria 7240
162 Ga0495671_0001325 3300046692 Bacteria 16801
163 Ga0495581_0021619 3300047315 Bacteria 3727
164 Ga0495604_0005483 3300047317 Bacteria 10059
165 Ga0495674_0033988 3300047319 Bacteria 4613
166 Ga0495672_0003671 3300047320 Bacteria 12966
167 Ga0495680_0086651 3300047322 Bacteria 2356
168 Ga0495687_000131 3300047443 Bacteria 114820
169 Ga0495675_0054171 3300047444 Bacteria 2546
170 Ga0495686_0000002 3300047472 Bacteria 1050777
171 Ga0495593_0006758 3300047673 Bacteria 6713
172 Ga0495602_0038201 3300048088 Bacteria 4443
173 Ga0495614_0037353 3300048089 Bacteria 2084
174 Ga0496100_0040842 3300048903 Bacteria 2954
175 Ga0496101_0020925 3300048904 Bacteria 4488
176 Ga0496108_0213901 3300048911 Bacteria 1674
177 Ga0496114_0000251 3300048917 Bacteria 38822
178 Ga0496114_0132935 3300048917 Bacteria 2150
179 Ga0496116_0003169 3300048919 Bacteria 16478
180 Ga0496116_0036261 3300048919 Bacteria 3453
181 Ga0496122_0001346 3300048925 Bacteria 40096
182 Ga0496122_0121220 3300048925 Bacteria 1686
183 Ga0496123_0008792 3300048926 Bacteria 9209
184 Ga0496125_0038162 3300048928 Bacteria 4163
185 Ga0496126_0026239 3300048929 Bacteria 5589
186 Ga0501034_0000169 3300049571 Bacteria 122591
187 Ga0501037_0040059 3300049573 Bacteria 3448
188 Ga0501038_0034357 3300049574 Bacteria 4459
189 Ga0501040_0002570 3300049576 Bacteria 11708
190 Ga0501041_0055122 3300049577 Bacteria 2426
191 Ga0501043_0065163 3300049579 Bacteria 2861
192 Ga0501048_0057873 3300049582 Bacteria 2748
193 Ga0501072_0031243 3300049588 Bacteria 4167
194 Ga0501075_0010927 3300049591 Bacteria 6402
195 Ga0501075_0027954 3300049591 Bacteria 4159
196 Ga0501076_0002338 3300049592 Bacteria 12975
197 Ga0501077_0086891 3300049593 Bacteria 1982
198 Ga0501209_001677 3300049656 Bacteria 3197
199 Ga0501079_0008736 3300049741 Bacteria 7678
200 Ga0501080_0062957 3300049742 Bacteria 3452
201 Ga0501081_0008854 3300049743 Bacteria 6542
202 Ga0501045_0007731 3300049824 Bacteria 7476
203 Ga0500650_0000153 3300053098 Bacteria 18041
204 Ga0500595_010657 3300053119 Bacteria 3642
205 Ga0501082_0004701 3300060353 Bacteria 11907
206 Ga0530510_0002418 3300061734 Bacteria 12862

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049573 Ga0501037_0040059 Ga0501037_0040059_769_1710 312
2 3300048917 Ga0496114_0132935 Ga0496114_0132935_786_1772 323
3 3300042876 Ga0451577_0112072 Ga0451577_0112072_166_1281 333
4 3300045051 Ga0451576_0108336 Ga0451576_0108336_1149_2264 333
5 3300026118 Ga0207675_100321349 Ga0207675_1003213492 337
6 3300013105 Ga0157369_10010913 Ga0157369_100109138 347
7 iso_pu_bacteria 2526164512 2526211884 348
8 iso_pu_bacteria 2574179768 2574430513 349
9 3300005985 Ga0081539_10009698 Ga0081539_100096985 350
10 3300026089 Ga0207648_10106981 Ga0207648_101069812 350
11 3300049591 Ga0501075_0027954 Ga0501075_0027954_613_1671 351
12 3300049593 Ga0501077_0086891 Ga0501077_0086891_597_1655 351
13 3300005364 Ga0070673_100055737 Ga0070673_1000557373 352
14 3300025960 Ga0207651_10063788 Ga0207651_100637883 352
15 3300049656 Ga0501209_001677 Ga0501209_001677_1370_2455 352
16 3300005355 Ga0070671_100043010 Ga0070671_1000430103 353
17 3300005841 Ga0068863_100084046 Ga0068863_1000840464 353
18 3300014969 Ga0157376_10025434 Ga0157376_100254344 353
19 3300025903 Ga0207680_10056464 Ga0207680_100564643 353
20 3300025931 Ga0207644_10002671 Ga0207644_100026713 353
21 3300005618 Ga0068864_100039293 Ga0068864_1000392934 354
22 3300009094 Ga0111539_10236007 Ga0111539_102360073 354
23 3300009177 Ga0105248_10032070 Ga0105248_100320703 354
24 3300009553 Ga0105249_10025967 Ga0105249_100259674 354
25 3300025941 Ga0207711_10240017 Ga0207711_102400171 354
26 3300046558 Ga0495633_0002752 Ga0495633_0002752_165_1280 355
27 iso_pu_bacteria 2773857672 2774129694 355
28 iso_pu_bacteria 2919125081 2919127306 355
29 iso_pu_bacteria 2932422444 2932424736 355
30 iso_pu_bacteria 2974298342 2974301905 355
31 iso_pu_bacteria 2984499530 2984500527 355
32 3300013102 Ga0157371_10005446 Ga0157371_1000544613 356
33 3300014325 Ga0163163_10375359 Ga0163163_103753592 357
34 3300035121 Ga0373960_0022668 Ga0373960_0022668_132_1220 357
35 iso_pu_bacteria 2510065053 2510284475 357
36 iso_pu_bacteria 2510065055 2510296027 357
37 iso_pu_bacteria 2510065058 2510312341 357
38 iso_pu_bacteria 2917832318 2917834512 357
39 iso_pu_bacteria 2984504281 2984507041 357
40 iso_pu_bacteria 8016728285 8016730892 357
41 iso_pu_bacteria 2643221596 2643994646 358
42 iso_pu_bacteria 639633007 639787959 358
43 3300025315 Ga0207697_10035968 Ga0207697_100359682 359
44 3300032133 Ga0316583_10001643 Ga0316583_100016434 359
45 3300037068 Ga0373925_0027715 Ga0373925_0027715_932_2023 359
46 3300042876 Ga0451577_0150864 Ga0451577_0150864_876_1970 359
47 3300045051 Ga0451576_0000174 Ga0451576_0000174_5366_6460 359
48 iso_pu_bacteria 2643221570 2643868546 359
49 iso_pu_bacteria 2990710928 2990715584 359
50 3300026041 Ga0207639_10209091 Ga0207639_102090912 360
51 3300029957 Ga0265324_10019354 Ga0265324_100193543 360
52 3300031238 Ga0265332_10000039 Ga0265332_1000003961 360
53 3300031251 Ga0265327_10037584 Ga0265327_100375842 360
54 3300031507 Ga0307509_10000018 Ga0307509_1000001886 360
55 3300042876 Ga0451577_0000013 Ga0451577_0000013_312561_313646 360
56 3300042876 Ga0451577_0366284 Ga0451577_0366284_145_1230 360
57 3300044673 Ga0453683_0000033 Ga0453683_0000033_191404_192489 360
58 3300044712 Ga0453684_0000029 Ga0453684_0000029_158019_159104 360
59 3300044712 Ga0453684_0000085 Ga0453684_0000085_84172_85257 360
60 3300045051 Ga0451576_0000018 Ga0451576_0000018_237044_238129 360
61 3300048925 Ga0496122_0121220 Ga0496122_0121220_480_1604 360
62 3300049574 Ga0501038_0034357 Ga0501038_0034357_3118_4203 360
63 3300049576 Ga0501040_0002570 Ga0501040_0002570_7463_8548 360
64 3300049577 Ga0501041_0055122 Ga0501041_0055122_540_1625 360
65 3300049582 Ga0501048_0057873 Ga0501048_0057873_524_1609 360
66 3300049588 Ga0501072_0031243 Ga0501072_0031243_82_1167 360
67 3300049591 Ga0501075_0010927 Ga0501075_0010927_1288_2373 360
68 3300049592 Ga0501076_0002338 Ga0501076_0002338_9101_10186 360
69 3300049741 Ga0501079_0008736 Ga0501079_0008736_1657_2742 360
70 3300049742 Ga0501080_0062957 Ga0501080_0062957_104_1189 360
71 3300049743 Ga0501081_0008854 Ga0501081_0008854_263_1348 360
72 3300049824 Ga0501045_0007731 Ga0501045_0007731_4029_5114 360
73 3300060353 Ga0501082_0004701 Ga0501082_0004701_2643_3728 360
74 3300061734 Ga0530510_0002418 Ga0530510_0002418_7380_8465 360
75 iso_pu_bacteria 2547132512 2548848795 360
76 3300025925 Ga0207650_10027618 Ga0207650_100276183 361
77 3300032005 Ga0307411_10171358 Ga0307411_101713582 361
78 3300032126 Ga0307415_100243051 Ga0307415_1002430512 361
79 3300042876 Ga0451577_0018090 Ga0451577_0018090_5187_6275 361
80 3300044712 Ga0453684_0005030 Ga0453684_0005030_15131_16219 361
81 3300045051 Ga0451576_0002224 Ga0451576_0002224_209_1297 361
82 3300045051 Ga0451576_0053376 Ga0451576_0053376_2490_3578 361
83 iso_pu_bacteria 2891633521 2891636174 361
84 3300005434 Ga0070709_10080203 Ga0070709_100802031 362
85 3300005456 Ga0070678_100200176 Ga0070678_1002001762 362
86 3300005539 Ga0068853_100174987 Ga0068853_1001749872 362
87 3300005548 Ga0070665_100212752 Ga0070665_1002127522 362
88 3300005841 Ga0068863_100021113 Ga0068863_1000211133 362
89 3300005841 Ga0068863_100100540 Ga0068863_1001005401 362
90 3300005842 Ga0068858_100436962 Ga0068858_1004369622 362
91 3300006237 Ga0097621_100039430 Ga0097621_1000394304 362
92 3300013297 Ga0157378_10011732 Ga0157378_100117326 362
93 3300014325 Ga0163163_10231130 Ga0163163_102311302 362
94 3300026041 Ga0207639_10129610 Ga0207639_101296103 362
95 3300026095 Ga0207676_10034250 Ga0207676_100342503 362
96 3300028379 Ga0268266_10114690 Ga0268266_101146903 362
97 3300039437 Ga0436365_0599013 Ga0436365_0599013_244_1416 362
98 3300044712 Ga0453684_0000677 Ga0453684_0000677_69874_70968 362
99 3300045051 Ga0451576_0042042 Ga0451576_0042042_2186_3280 362
100 3300031239 Ga0265328_10000120 Ga0265328_1000012030 363
101 3300031250 Ga0265331_10067348 Ga0265331_100673482 363
102 3300031251 Ga0265327_10009775 Ga0265327_100097756 363
103 3300044673 Ga0453683_0126902 Ga0453683_0126902_13_1110 363
104 3300044712 Ga0453684_0029199 Ga0453684_0029199_2306_3403 363
105 3300045051 Ga0451576_0007940 Ga0451576_0007940_1707_2804 363
106 3300045051 Ga0451576_0105668 Ga0451576_0105668_57_1154 363
107 3300046542 Ga0495597_0002295 Ga0495597_0002295_6215_7333 363
108 3300047320 Ga0495672_0003671 Ga0495672_0003671_6628_7746 363
109 iso_pu_bacteria 2734482258 2735817144 363
110 iso_pu_bacteria 2904434214 2904435546 363
111 iso_pu_bacteria 8039098773 8039099416 363
112 iso_pu_bacteria 8040167225 8040170542 363
113 3300013296 Ga0157374_10000231 Ga0157374_1000023134 364
114 3300025934 Ga0207686_10101851 Ga0207686_101018512 364
115 3300042876 Ga0451577_0008244 Ga0451577_0008244_7986_9083 364
116 3300044693 Ga0466961_0117100 Ga0466961_0117100_516_1610 364
117 3300045051 Ga0451576_0003600 Ga0451576_0003600_209_1306 364
118 3300045051 Ga0451576_0015649 Ga0451576_0015649_2328_3425 364
119 3300044656 Ga0466969_0072150 Ga0466969_0072150_365_1462 365
120 3300044666 Ga0466977_0000795 Ga0466977_0000795_1990_3087 365
121 3300049579 Ga0501043_0065163 Ga0501043_0065163_1528_2625 365
122 3300031250 Ga0265331_10026777 Ga0265331_100267771 366
123 3300031251 Ga0265327_10000094 Ga0265327_1000009459 366
124 3300005331 Ga0070670_100000064 Ga0070670_10000006420 367
125 3300005335 Ga0070666_10003552 Ga0070666_100035527 367
126 3300005353 Ga0070669_100002544 Ga0070669_10000254411 367
127 3300005355 Ga0070671_100000025 Ga0070671_10000002537 367
128 3300005365 Ga0070688_100004678 Ga0070688_1000046784 367
129 3300005367 Ga0070667_100000095 Ga0070667_10000009581 367
130 3300005466 Ga0070685_10000005 Ga0070685_1000000571 367
131 3300005617 Ga0068859_100224098 Ga0068859_1002240982 367
132 3300005618 Ga0068864_100000073 Ga0068864_10000007381 367
133 3300005843 Ga0068860_100000326 Ga0068860_1000003263 367
134 3300005844 Ga0068862_100002886 Ga0068862_10000288611 367
135 3300006931 Ga0097620_100224086 Ga0097620_1002240861 367
136 3300009101 Ga0105247_10013272 Ga0105247_100132722 367
137 3300013105 Ga0157369_10077781 Ga0157369_100777812 367
138 3300014325 Ga0163163_10000230 Ga0163163_1000023033 367
139 3300014968 Ga0157379_10085116 Ga0157379_100851163 367
140 3300025923 Ga0207681_10000156 Ga0207681_100001564 367
141 3300025925 Ga0207650_10000106 Ga0207650_1000010620 367
142 3300025931 Ga0207644_10000049 Ga0207644_1000004910 367
143 3300025941 Ga0207711_10001196 Ga0207711_1000119621 367
144 3300025986 Ga0207658_10000073 Ga0207658_1000007320 367
145 3300026088 Ga0207641_10063213 Ga0207641_100632133 367
146 3300026095 Ga0207676_10000010 Ga0207676_1000001020 367
147 3300028379 Ga0268266_10022816 Ga0268266_100228167 367
148 3300028380 Ga0268265_10003355 Ga0268265_100033556 367
149 3300028381 Ga0268264_10000123 Ga0268264_10000123111 367
150 3300045836 Ga0466958_0084481 Ga0466958_0084481_746_1867 367
151 3300046455 Ga0495603_0002700 Ga0495603_0002700_2963_4075 367
152 3300046459 Ga0495629_0004428 Ga0495629_0004428_9246_10358 367
153 3300046459 Ga0495629_0004573 Ga0495629_0004573_4812_5924 367
154 3300046463 Ga0495653_0018625 Ga0495653_0018625_1509_2621 367
155 3300046471 Ga0495650_0003069 Ga0495650_0003069_9036_10148 367
156 3300046472 Ga0495580_0056883 Ga0495580_0056883_53_1165 367
157 3300046476 Ga0495662_0035510 Ga0495662_0035510_589_1701 367
158 3300046477 Ga0495664_0007232 Ga0495664_0007232_2844_3956 367
159 3300046516 Ga0495628_0008473 Ga0495628_0008473_5148_6260 367
160 3300046529 Ga0495652_0016759 Ga0495652_0016759_3386_4498 367
161 3300046530 Ga0495654_0050870 Ga0495654_0050870_560_1672 367
162 3300046531 Ga0495665_0002464 Ga0495665_0002464_2130_3242 367
163 3300046535 Ga0495586_0022555 Ga0495586_0022555_1616_2728 367
164 3300046543 Ga0495645_0055728 Ga0495645_0055728_13_1125 367
165 3300046679 Ga0495623_0014837 Ga0495623_0014837_2875_3987 367
166 3300046680 Ga0495646_0012470 Ga0495646_0012470_1969_3081 367
167 3300046690 Ga0495624_0008336 Ga0495624_0008336_4320_5432 367
168 3300047315 Ga0495581_0021619 Ga0495581_0021619_1486_2598 367
169 3300047319 Ga0495674_0033988 Ga0495674_0033988_1900_3012 367
170 3300047322 Ga0495680_0086651 Ga0495680_0086651_594_1706 367
171 3300047443 Ga0495687_000131 Ga0495687_000131_104163_105284 367
172 3300047444 Ga0495675_0054171 Ga0495675_0054171_643_1755 367
173 3300047472 Ga0495686_0000002 Ga0495686_0000002_295303_296427 367
174 3300047673 Ga0495593_0006758 Ga0495593_0006758_2271_3383 367
175 3300048088 Ga0495602_0038201 Ga0495602_0038201_1969_3081 367
176 3300048089 Ga0495614_0037353 Ga0495614_0037353_165_1277 367
177 3300048903 Ga0496100_0040842 Ga0496100_0040842_501_1613 367
178 3300048904 Ga0496101_0020925 Ga0496101_0020925_870_1982 367
179 3300048911 Ga0496108_0213901 Ga0496108_0213901_152_1264 367
180 3300048917 Ga0496114_0000251 Ga0496114_0000251_9134_10246 367
181 3300048928 Ga0496125_0038162 Ga0496125_0038162_430_1578 367
182 3300048929 Ga0496126_0026239 Ga0496126_0026239_1821_2957 367
183 3300053098 Ga0500650_0000153 Ga0500650_0000153_6091_7230 367
184 3300053119 Ga0500595_010657 Ga0500595_010657_1907_3043 367
185 iso_pu_bacteria 2513237150 2513955786 367
186 iso_pu_bacteria 2513237165 2514041190 367
187 iso_pu_bacteria 644736347 644748654 367
188 iso_pu_bacteria 2834641062 2834641383 368
189 iso_pu_bacteria 8003400568 8003403708 368
190 3300041404 Ga0439436_0015620 Ga0439436_0015620_872_1993 370
191 3300025294 Ga0209025_1000504 Ga0209025_100050450 371
192 3300048919 Ga0496116_0003169 Ga0496116_0003169_2231_3346 371
193 3300049571 Ga0501034_0000169 Ga0501034_0000169_55979_57094 371
194 3300003322 rootL2_10245197 rootL2_102451972 372
195 3300046472 Ga0495580_0099080 Ga0495580_0099080_527_1645 372
196 3300047317 Ga0495604_0005483 Ga0495604_0005483_7538_8656 372
197 3300003187 JGI25151J46595_10000587 JGI25151J46595_100005879 373
198 3300003187 JGI25151J46595_10011109 JGI25151J46595_100111094 373
199 3300003771 Ga0055526_1013179 Ga0055526_10131794 373
200 3300003775 Ga0055524_1000431 Ga0055524_100043121 373
201 3300003775 Ga0055524_1000508 Ga0055524_100050811 373
202 3300003775 Ga0055524_1003391 Ga0055524_10033916 373
203 3300003781 Ga0055536_1000022 Ga0055536_1000022102 373
204 3300003784 Ga0055534_1000370 Ga0055534_100037012 373
205 3300003784 Ga0055534_1005314 Ga0055534_10053143 373
206 3300006948 Ga0099826_10000016 Ga0099826_1000001651 373
207 3300009011 Ga0105251_10051353 Ga0105251_100513532 373
208 3300025263 Ga0209565_1000155 Ga0209565_100015522 373
209 3300025263 Ga0209565_1002324 Ga0209565_10023243 373
210 3300025291 Ga0209675_1000070 Ga0209675_100007062 373
211 3300025291 Ga0209675_1009004 Ga0209675_10090043 373
212 3300025291 Ga0209675_1015443 Ga0209675_10154431 373
213 3300025292 Ga0209676_1000012 Ga0209676_1000012574 373
214 3300025294 Ga0209025_1000124 Ga0209025_1000124138 373
215 3300025294 Ga0209025_1000524 Ga0209025_100052463 373
216 3300025294 Ga0209025_1015333 Ga0209025_10153334 373
217 3300025295 Ga0209564_1000350 Ga0209564_100035069 373
218 3300025295 Ga0209564_1000380 Ga0209564_100038062 373
219 3300025295 Ga0209564_1001372 Ga0209564_100137210 373
220 3300025297 Ga0209758_1005172 Ga0209758_100517210 373
221 3300025299 Ga0209256_1000059 Ga0209256_1000059156 373
222 3300025299 Ga0209256_1000149 Ga0209256_100014919 373
223 3300025303 Ga0209051_1005772 Ga0209051_10057722 373
224 3300025735 Ga0207713_1062915 Ga0207713_10629152 373
225 3300027666 Ga0209282_1000064 Ga0209282_10000644 373
226 3300046474 Ga0495605_0002305 Ga0495605_0002305_3566_4687 373
227 3300046500 Ga0495596_0000048 Ga0495596_0000048_13779_14900 373
228 3300046507 Ga0495606_0047780 Ga0495606_0047780_692_1813 373
229 3300046512 Ga0495610_0001040 Ga0495610_0001040_7790_8911 373
230 3300046538 Ga0495609_0001205 Ga0495609_0001205_2646_3767 373
231 3300046692 Ga0495671_0001325 Ga0495671_0001325_31_1152 373
232 3300048919 Ga0496116_0036261 Ga0496116_0036261_281_1402 373
233 3300048925 Ga0496122_0001346 Ga0496122_0001346_9491_10612 373
234 3300048926 Ga0496123_0008792 Ga0496123_0008792_2930_4051 373

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00383

dCMP_cyt_deam_1

Cytidine and deoxycytidylate deaminase zinc-binding region

1

102

0.94

PF01872

RibD_C

RibD C-terminal domain

149

401

0.84

PF14437

MafB19-deam

MafB19-like deaminase

1

143

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
3zpc-assembly1.cif.gz_B acinetobacter baumannii ribd, form 1 0.9265 5 370
8dqc-assembly1.cif.gz_A crystal structure of 3-dehydroquinate dehydratase i from klebsiella oxytoca (i222 form) 0.9263 5 369
8dq9-assembly1.cif.gz_B crystal structure of gdp bound 3-dehydroquinate dehydratase i from klebsiella oxytoca 0.9247 6 367
8dq9-assembly1.cif.gz_A crystal structure of gdp bound 3-dehydroquinate dehydratase i from klebsiella oxytoca 0.9224 6 369
2azn-assembly1.cif.gz_A x-ray structure of 2,5-diamino-6-ribosylamino-4(3h)-pyrimidinone 5-phosphate reductase 0.9202 152 370
ID Description Score Start End Superfamily
af_Q8GWP5_63_211_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9612 3 145 3.40.140.10
2obcB01 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9546 11 141 3.40.140.10
4g3mB01 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9461 2 141 3.40.140.10
4g3mB01 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9394 2 141 3.40.140.10
2hxvA01 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9373 3 150 3.40.140.10
ID Description Score Start End GO Terms
AF-A0A1F4HSN3-F1-model_v4 deleted 0.993 10 141
AF-A0A6G2DF39-F1-model_v4 Riboflavin biosynthesis protein RibD 0.9897 41 145 GO:0008270
GO:0016787
AF-F0GBK6-F1-model_v4 Riboflavin biosynthesis protein RibD (EC 1.1.1.193) (EC 3.5.4.26) 0.988 1 221 GO:0008270
GO:0008703
GO:0008835
GO:0009231
AF-F0GBK6-F1-model_v4 Riboflavin biosynthesis protein RibD (EC 1.1.1.193) (EC 3.5.4.26) 0.9836 1 221 GO:0008270
GO:0008703
GO:0008835
GO:0009231
AF-A0A7V3T2M1-F1-model_v4 diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) 0.9829 11 176 GO:0008270
GO:0008703
GO:0008835
GO:0009231

Feature Viewer

pLDDT pTM Quality
93.44 0.91 High
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Predicted Structure (AlphaFold2)

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