F327994

General Info

Members Datasets Scaffolds Average Seq Length
216 148 216 235

Family's Representative Sequence

Representative Sequence 3300048903|Ga0496100_0007743|Ga0496100_0007743_3408_4211
Length 267
Sequence MSAAARGTRGAADDRPGSAERGALDAAGEQGELGDRRLLKMSELAERSGVSAGTIRYYLREGLLGGGEDIVRTSRNMAYYPPQYVERIELIRRLQEKRFMPLRVIKGTLEEDPGRVHALIELEDRILERALASAEDSRRVSLKAVQERYEIPRNVLDRLAEIGVLTPNRSGYDQDDVKIIEAIASFRAGGYEEELGFTVYDTLRYREALEPLVQAEVRALLERLAGEVEVERAMEIVAAGVEPLRELLGAMHSKLLLAELRRQRSRN

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
15 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
16 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
17 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
18 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
19 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
20 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
21 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
22 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
23 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
24 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
25 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
26 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
27 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
28 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
29 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
30 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
31 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
32 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
33 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
34 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
51 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
52 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
53 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
54 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
55 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
56 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
57 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
58 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
59 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
60 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
61 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
62 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
63 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
64 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
65 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
66 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
67 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
68 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
69 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
70 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
71 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
72 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
73 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
74 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
75 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
76 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
77 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
78 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
79 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
80 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
81 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
82 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
83 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
84 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
85 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
86 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
87 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
88 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
89 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
90 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
91 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
92 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
93 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
94 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
95 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
96 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
97 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
98 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
99 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
100 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
101 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
102 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
103 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
104 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
105 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
106 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
107 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
108 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
109 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
110 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
111 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
112 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
113 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
114 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
115 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
116 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
117 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
118 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
119 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
120 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
132 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
133 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
134 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
135 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
136 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
137 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
138 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
139 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
140 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
141 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
142 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
143 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
144 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
145 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
146 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
147 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
148 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.54
Metatranscriptomes 0.46
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.93
Nodule 0
Rhizoplane 14.81
Rhizosphere 79.17
Stem 0
Stem Tuber 0
Unclassified 5.09

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10132449 3300005327 Bacteria 2078
2 Ga0070683_100218184 3300005329 Bacteria 1813
3 Ga0070690_100570923 3300005330 Bacteria 855
4 Ga0070660_100071489 3300005339 Bacteria 2709
5 Ga0070660_100132851 3300005339 Bacteria 1993
6 Ga0070689_100328094 3300005340 Bacteria 1280
7 Ga0070659_100000008 3300005366 Bacteria 204009
8 Ga0070714_100003642 3300005435 Bacteria 11535
9 Ga0070714_100008733 3300005435 Bacteria 7920
10 Ga0070714_100155415 3300005435 Bacteria 2064
11 Ga0070714_100393833 3300005435 Bacteria 1308
12 Ga0070714_100399958 3300005435 Bacteria 1298
13 Ga0070713_100182326 3300005436 Bacteria 1887
14 Ga0070713_100226786 3300005436 Bacteria 1697
15 Ga0070711_100001718 3300005439 Bacteria 12148
16 Ga0070711_100269565 3300005439 Bacteria 1343
17 Ga0070705_100001681 3300005440 Bacteria 11576
18 Ga0070681_10423019 3300005458 Bacteria 1244
19 Ga0070684_100405183 3300005535 Bacteria 1258
20 Ga0068856_100000461 3300005614 Bacteria 44805
21 Ga0070717_10034855 3300006028 Bacteria 4070
22 Ga0070716_100290947 3300006173 Bacteria 1132
23 Ga0070712_100000006 3300006175 Bacteria 161357
24 Ga0075433_10605790 3300006852 Bacteria 962
25 Ga0075429_100026058 3300006880 Bacteria 5075
26 Ga0105240_10006301 3300009093 Bacteria 17461
27 Ga0105245_10087840 3300009098 Bacteria 2854
28 Ga0105243_10642607 3300009148 Bacteria 1027
29 Ga0105237_10005913 3300009545 Bacteria 13721
30 Ga0105239_10085473 3300010375 Bacteria 3477
31 Ga0105246_10049787 3300011119 Bacteria 2870
32 Ga0157374_10732325 3300013296 Bacteria 1003
33 Ga0157378_10519836 3300013297 Bacteria 1192
34 Ga0163162_10468056 3300013306 Bacteria 1392
35 Ga0163163_10737871 3300014325 Bacteria 1048
36 Ga0157380_10239325 3300014326 Bacteria 1635
37 Ga0157377_10244568 3300014745 Bacteria 1160
38 Ga0206353_10936133 3300020082 Bacteria 1014
39 Ga0213874_10021495 3300021377 Bacteria 1780
40 Ga0213876_10082663 3300021384 Bacteria 1699
41 Ga0207699_10520253 3300025906 Bacteria 860
42 Ga0207705_10565676 3300025909 Bacteria 884
43 Ga0207707_10221496 3300025912 Bacteria 1647
44 Ga0207695_10017454 3300025913 Bacteria 8352
45 Ga0207671_10004340 3300025914 Bacteria 13617
46 Ga0207693_10000078 3300025915 Bacteria 86652
47 Ga0207693_10034197 3300025915 Bacteria 4010
48 Ga0207693_10035537 3300025915 Bacteria 3928
49 Ga0207693_10214908 3300025915 Bacteria 1511
50 Ga0207663_10001740 3300025916 Bacteria 10235
51 Ga0207657_10081938 3300025919 Bacteria 2709
52 Ga0207700_10027685 3300025928 Bacteria 3974
53 Ga0207700_10040234 3300025928 Bacteria 3410
54 Ga0207700_10286532 3300025928 Bacteria 1418
55 Ga0207664_10000020 3300025929 Bacteria 218362
56 Ga0207664_10003078 3300025929 Bacteria 11081
57 Ga0207664_10067683 3300025929 Bacteria 2867
58 Ga0207690_10000050 3300025932 Bacteria 110472
59 Ga0207665_10201369 3300025939 Bacteria 1451
60 Ga0207691_10103899 3300025940 Bacteria 2533
61 Ga0207708_10432682 3300026075 Bacteria 1093
62 Ga0207702_10000326 3300026078 Bacteria 54674
63 Ga0207676_10292083 3300026095 Bacteria 1485
64 Ga0265337_1001839 3300028556 Bacteria 10164
65 Ga0265326_10000212 3300028558 Bacteria 28661
66 Ga0265319_1000215 3300028563 Bacteria 43681
67 Ga0265318_10000964 3300028577 Bacteria 18469
68 Ga0265336_10000001 3300028666 Bacteria 916179
69 Ga0265338_10000532 3300028800 Bacteria 66760
70 Ga0265324_10018452 3300029957 Bacteria 2522
71 Ga0265330_10038332 3300031235 Bacteria 2131
72 Ga0265340_10000002 3300031247 Bacteria 711693
73 Ga0265339_10065688 3300031249 Bacteria 1944
74 Ga0265327_10005099 3300031251 Bacteria 11176
75 Ga0316576_10078940 3300031727 Bacteria 2439
76 Ga0307406_10133358 3300031901 Bacteria 1747
77 Ga0307416_101301837 3300032002 Bacteria 833
78 Ga0307415_100214970 3300032126 Bacteria 1537
79 Ga0373945_0050091 3300035116 Bacteria 1534
80 Ga0316574_0072534 3300035398 Bacteria 2176
81 Ga0373937_0115866 3300036401 Bacteria 2495
82 Ga0373937_0386328 3300036401 Bacteria 1328
83 Ga0395900_0483761 3300037418 Bacteria 1190
84 Ga0395900_1007746 3300037418 Bacteria 752
85 Ga0395898_0032230 3300037466 Bacteria 5230
86 Ga0395898_0673435 3300037466 Bacteria 977
87 Ga0395898_0838422 3300037466 Bacteria 859
88 Ga0436364_0197420 3300037853 Bacteria 3789
89 Ga0395901_0029317 3300038443 Bacteria 5665
90 Ga0395901_0485711 3300038443 Bacteria 1259
91 Ga0395901_0631887 3300038443 Bacteria 1076
92 Ga0436365_0731161 3300039437 Bacteria 3720
93 Ga0436365_0795993 3300039437 Bacteria 2011
94 Ga0436365_1190595 3300039437 Bacteria 5629
95 Ga0436363_0514699 3300039450 Bacteria 2107
96 Ga0436363_0702063 3300039450 Bacteria 1416
97 Ga0436362_0229823 3300039453 Bacteria 2579
98 Ga0451853_1721410 3300041512 Bacteria 1011
99 Ga0466969_0170249 3300044656 Bacteria 999
100 Ga0466972_0063334 3300044658 Bacteria 1771
101 Ga0466965_0012380 3300044683 Bacteria 4011
102 Ga0466966_0037053 3300044684 Bacteria 3147
103 Ga0466966_0056025 3300044684 Bacteria 2495
104 Ga0466966_0228959 3300044684 Bacteria 1121
105 Ga0466961_0029333 3300044693 Bacteria 3537
106 Ga0466961_0077864 3300044693 Bacteria 2100
107 Ga0466963_0004058 3300044694 Bacteria 8469
108 Ga0466971_0000295 3300044719 Bacteria 19116
109 Ga0466971_0098026 3300044719 Bacteria 1345
110 Ga0466971_0103559 3300044719 Bacteria 1309
111 Ga0466968_0067035 3300044735 Bacteria 1556
112 Ga0466970_0004766 3300044765 Bacteria 6700
113 Ga0466970_0017308 3300044765 Bacteria 3724
114 Ga0466957_0002843 3300044842 Bacteria 9366
115 Ga0466957_0003447 3300044842 Bacteria 8676
116 Ga0466957_0391464 3300044842 Bacteria 949
117 Ga0466960_0000086 3300044901 Bacteria 31137
118 Ga0466960_0010731 3300044901 Bacteria 3812
119 Ga0466960_0021350 3300044901 Bacteria 2881
120 Ga0466960_0185756 3300044901 Bacteria 1129
121 Ga0466960_0200277 3300044901 Bacteria 1091
122 Ga0466959_0006766 3300045049 Bacteria 7986
123 Ga0466959_0052242 3300045049 Bacteria 2994
124 Ga0466959_0141595 3300045049 Bacteria 1699
125 Ga0466959_0292129 3300045049 Bacteria 1117
126 Ga0466958_0000371 3300045836 Bacteria 18214
127 Ga0466958_0071331 3300045836 Bacteria 2127
128 Ga0466967_0013746 3300045976 Bacteria 6271
129 Ga0466967_0088211 3300045976 Bacteria 2814
130 Ga0466967_0123612 3300045976 Bacteria 2394
131 Ga0466967_0233303 3300045976 Bacteria 1753
132 Ga0466967_0353916 3300045976 Bacteria 1422
133 Ga0466967_0772919 3300045976 Bacteria 953
134 Ga0495653_0003139 3300046463 Bacteria 13240
135 Ga0495650_0001091 3300046471 Bacteria 29742
136 Ga0495608_0009975 3300046511 Bacteria 6630
137 Ga0495618_0000077 3300046514 Bacteria 69702
138 Ga0495618_0070876 3300046514 Bacteria 2217
139 Ga0495628_0114585 3300046516 Bacteria 2071
140 Ga0495630_0003770 3300046517 Bacteria 10586
141 Ga0495645_0000050 3300046543 Bacteria 87415
142 Ga0495645_0000570 3300046543 Bacteria 25272
143 Ga0495657_0000011 3300046675 Bacteria 207360
144 Ga0495623_0044941 3300046679 Bacteria 2806
145 Ga0495604_0051285 3300047317 Bacteria 3199
146 Ga0495674_0094366 3300047319 Bacteria 2552
147 Ga0495672_0196599 3300047320 Bacteria 1011
148 Ga0495680_0011747 3300047322 Bacteria 7737
149 Ga0495684_0004205 3300047471 Bacteria 11245
150 Ga0495684_0013407 3300047471 Bacteria 6309
151 Ga0496100_0007743 3300048903 Bacteria 5950
152 Ga0496100_0070271 3300048903 Bacteria 2334
153 Ga0496101_0007050 3300048904 Bacteria 7265
154 Ga0496102_0000002 3300048905 Bacteria 814588
155 Ga0496102_0019810 3300048905 Bacteria 5930
156 Ga0496103_0000017 3300048906 Bacteria 244768
157 Ga0496104_0021450 3300048907 Bacteria 5930
158 Ga0496104_0466497 3300048907 Bacteria 1174
159 Ga0496104_0640722 3300048907 Bacteria 972
160 Ga0496105_0015696 3300048908 Bacteria 6043
161 Ga0496105_0637772 3300048908 Bacteria 823
162 Ga0496106_0031377 3300048909 Bacteria 3959
163 Ga0496106_0732784 3300048909 Bacteria 787
164 Ga0496107_0187805 3300048910 Bacteria 1535
165 Ga0496108_0037677 3300048911 Bacteria 4029
166 Ga0496108_0248053 3300048911 Bacteria 1549
167 Ga0496109_0139240 3300048912 Bacteria 2269
168 Ga0496109_0146003 3300048912 Bacteria 2213
169 Ga0496109_0712110 3300048912 Bacteria 941
170 Ga0496110_0354914 3300048913 Bacteria 1336
171 Ga0496112_0000209 3300048915 Bacteria 38008
172 Ga0496112_0002610 3300048915 Bacteria 14544
173 Ga0496112_0046867 3300048915 Bacteria 4240
174 Ga0496112_0102694 3300048915 Bacteria 2829
175 Ga0496112_0121737 3300048915 Bacteria 2579
176 Ga0496112_0210669 3300048915 Bacteria 1901
177 Ga0496113_0023507 3300048916 Bacteria 4370
178 Ga0496113_0131929 3300048916 Bacteria 1961
179 Ga0496113_0545189 3300048916 Bacteria 930
180 Ga0496115_0000297 3300048918 Bacteria 42738
181 Ga0496115_0010602 3300048918 Bacteria 6893
182 Ga0496115_0121276 3300048918 Bacteria 2152
183 Ga0496122_0131966 3300048925 Bacteria 1585
184 Ga0496124_0299391 3300048927 Bacteria 1163
185 Ga0501032_0009994 3300049569 Bacteria 6853
186 Ga0501033_0008370 3300049570 Bacteria 8009
187 Ga0501034_0087588 3300049571 Bacteria 3113
188 Ga0501036_0049958 3300049572 Bacteria 3543
189 Ga0501038_0010665 3300049574 Bacteria 8403
190 Ga0501039_0053779 3300049575 Bacteria 3116
191 Ga0501042_0030484 3300049578 Bacteria 3809
192 Ga0501043_0006652 3300049579 Bacteria 9248
193 Ga0501046_0011962 3300049580 Bacteria 7403
194 Ga0501047_0409921 3300049581 Bacteria 1187
195 Ga0501048_0024076 3300049582 Bacteria 4446
196 Ga0501068_0014634 3300049584 Bacteria 4490
197 Ga0501069_0002831 3300049585 Bacteria 8875
198 Ga0501070_0130680 3300049586 Bacteria 2074
199 Ga0501072_0108921 3300049588 Bacteria 2204
200 Ga0501073_0009484 3300049589 Bacteria 7187
201 Ga0501074_0002219 3300049590 Bacteria 13472
202 Ga0501080_0008420 3300049742 Bacteria 9341
203 Ga0501083_0005386 3300049744 Bacteria 9056
204 nmdc:mga09592_23402_c1 3300050508 Bacteria 5103
205 nmdc:mga0n895_91797_c1 3300050512 Bacteria 3039
206 nmdc:mga0a205_565054_c1 3300050515 Bacteria 992
207 Ga0495601_0009751 3300053077 Bacteria 5679
208 Ga0495619_0181040 3300053085 Bacteria 1458
209 Ga0495619_0183586 3300053085 Bacteria 1447
210 Ga0500644_0217551 3300053088 Unclassified 796
211 Ga0500616_0023177 3300053153 Bacteria 3459
212 Ga0501084_0172086 3300054114 Bacteria 1828
213 Ga0501082_0139946 3300060353 Bacteria 2100
214 Ga0466962_0029705 3300061719 Bacteria 2616
215 Ga0466962_0112153 3300061719 Bacteria 1313
216 Ga0466962_0113947 3300061719 Bacteria 1302

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300061719 Ga0466962_0112153 Ga0466962_0112153_16_600 191
2 3300026095 Ga0207676_10292083 Ga0207676_102920832 202
3 3300005329 Ga0070683_100218184 Ga0070683_1002181842 204
4 3300014745 Ga0157377_10244568 Ga0157377_102445682 204
5 3300020082 Ga0206353_10936133 Ga0206353_109361332 204
6 3300025909 Ga0207705_10565676 Ga0207705_105656762 204
7 3300037466 Ga0395898_0838422 Ga0395898_0838422_164_808 204
8 3300038443 Ga0395901_0485711 Ga0395901_0485711_122_766 204
9 3300048915 Ga0496112_0121737 Ga0496112_0121737_1873_2517 204
10 3300025940 Ga0207691_10103899 Ga0207691_101038993 205
11 3300009098 Ga0105245_10087840 Ga0105245_100878404 206
12 3300013306 Ga0163162_10468056 Ga0163162_104680562 206
13 3300014325 Ga0163163_10737871 Ga0163163_107378711 206
14 3300037418 Ga0395900_1007746 Ga0395900_1007746_26_676 206
15 3300037466 Ga0395898_0032230 Ga0395898_0032230_4393_5043 206
16 3300038443 Ga0395901_0029317 Ga0395901_0029317_278_928 206
17 3300048907 Ga0496104_0021450 Ga0496104_0021450_2000_2650 206
18 3300048907 Ga0496104_0466497 Ga0496104_0466497_487_1137 206
19 3300048908 Ga0496105_0015696 Ga0496105_0015696_3564_4214 206
20 3300048908 Ga0496105_0637772 Ga0496105_0637772_64_714 206
21 3300048909 Ga0496106_0732784 Ga0496106_0732784_72_722 206
22 3300048910 Ga0496107_0187805 Ga0496107_0187805_265_915 206
23 3300048911 Ga0496108_0248053 Ga0496108_0248053_270_920 206
24 3300048912 Ga0496109_0139240 Ga0496109_0139240_1554_2204 206
25 3300048912 Ga0496109_0146003 Ga0496109_0146003_1054_1704 206
26 3300048915 Ga0496112_0046867 Ga0496112_0046867_1000_1650 206
27 3300048915 Ga0496112_0210669 Ga0496112_0210669_1187_1837 206
28 3300048916 Ga0496113_0545189 Ga0496113_0545189_60_710 206
29 3300048918 Ga0496115_0121276 Ga0496115_0121276_1479_2129 206
30 3300013296 Ga0157374_10732325 Ga0157374_107323251 207
31 3300032126 Ga0307415_100214970 Ga0307415_1002149702 207
32 3300041512 Ga0451853_1721410 Ga0451853_1721410_264_923 207
33 3300032002 Ga0307416_101301837 Ga0307416_1013018371 208
34 3300006880 Ga0075429_100026058 Ga0075429_1000260588 209
35 3300050508 nmdc:mga09592_23402_c1 nmdc:mga09592_23402_c1_1088_1786 209
36 3300048916 Ga0496113_0023507 Ga0496113_0023507_2283_2981 210
37 3300036401 Ga0373937_0386328 Ga0373937_0386328_503_1285 212
38 3300005440 Ga0070705_100001681 Ga0070705_1000016819 214
39 3300005535 Ga0070684_100405183 Ga0070684_1004051832 214
40 3300010375 Ga0105239_10085473 Ga0105239_100854734 217
41 3300005340 Ga0070689_100328094 Ga0070689_1003280942 219
42 3300005614 Ga0068856_100000461 Ga0068856_1000004616 219
43 3300026078 Ga0207702_10000326 Ga0207702_1000032634 219
44 3300031727 Ga0316576_10078940 Ga0316576_100789402 219
45 3300035398 Ga0316574_0072534 Ga0316574_0072534_1142_1849 219
46 3300005435 Ga0070714_100399958 Ga0070714_1003999582 221
47 3300021384 Ga0213876_10082663 Ga0213876_100826632 221
48 3300037466 Ga0395898_0673435 Ga0395898_0673435_256_963 221
49 3300037853 Ga0436364_0197420 Ga0436364_0197420_2567_3286 221
50 3300039437 Ga0436365_0731161 Ga0436365_0731161_2097_2801 221
51 3300049569 Ga0501032_0009994 Ga0501032_0009994_545_1243 221
52 3300049570 Ga0501033_0008370 Ga0501033_0008370_3301_3999 221
53 3300049572 Ga0501036_0049958 Ga0501036_0049958_2796_3494 221
54 3300049574 Ga0501038_0010665 Ga0501038_0010665_7193_7891 221
55 3300049575 Ga0501039_0053779 Ga0501039_0053779_1779_2477 221
56 3300049578 Ga0501042_0030484 Ga0501042_0030484_763_1461 221
57 3300049579 Ga0501043_0006652 Ga0501043_0006652_7149_7847 221
58 3300049580 Ga0501046_0011962 Ga0501046_0011962_1402_2100 221
59 3300049581 Ga0501047_0409921 Ga0501047_0409921_290_988 221
60 3300049582 Ga0501048_0024076 Ga0501048_0024076_141_839 221
61 3300049584 Ga0501068_0014634 Ga0501068_0014634_3282_3980 221
62 3300049585 Ga0501069_0002831 Ga0501069_0002831_6054_6752 221
63 3300049586 Ga0501070_0130680 Ga0501070_0130680_570_1268 221
64 3300049588 Ga0501072_0108921 Ga0501072_0108921_1381_2079 221
65 3300049589 Ga0501073_0009484 Ga0501073_0009484_3150_3848 221
66 3300049590 Ga0501074_0002219 Ga0501074_0002219_11619_12317 221
67 3300049742 Ga0501080_0008420 Ga0501080_0008420_3617_4315 221
68 3300049744 Ga0501083_0005386 Ga0501083_0005386_1689_2387 221
69 3300054114 Ga0501084_0172086 Ga0501084_0172086_619_1317 221
70 3300060353 Ga0501082_0139946 Ga0501082_0139946_283_981 221
71 3300005436 Ga0070713_100182326 Ga0070713_1001823262 222
72 3300025928 Ga0207700_10027685 Ga0207700_100276856 222
73 3300045976 Ga0466967_0772919 Ga0466967_0772919_180_884 222
74 3300046463 Ga0495653_0003139 Ga0495653_0003139_2214_3002 222
75 3300046514 Ga0495618_0000077 Ga0495618_0000077_8941_9711 222
76 3300046517 Ga0495630_0003770 Ga0495630_0003770_9114_9887 222
77 3300046543 Ga0495645_0000050 Ga0495645_0000050_7352_8125 222
78 3300046675 Ga0495657_0000011 Ga0495657_0000011_134872_135645 222
79 3300053077 Ga0495601_0009751 Ga0495601_0009751_2749_3522 222
80 3300053088 Ga0500644_0217551 Ga0500644_0217551_58_765 222
81 3300005435 Ga0070714_100393833 Ga0070714_1003938332 223
82 3300005439 Ga0070711_100001718 Ga0070711_10000171815 223
83 3300005439 Ga0070711_100269565 Ga0070711_1002695651 223
84 3300025916 Ga0207663_10001740 Ga0207663_100017405 223
85 3300031251 Ga0265327_10005099 Ga0265327_100050994 223
86 3300039450 Ga0436363_0514699 Ga0436363_0514699_378_1064 223
87 3300039453 Ga0436362_0229823 Ga0436362_0229823_1698_2405 223
88 3300044684 Ga0466966_0037053 Ga0466966_0037053_2268_2969 223
89 3300044693 Ga0466961_0029333 Ga0466961_0029333_2487_3188 223
90 3300044719 Ga0466971_0000295 Ga0466971_0000295_16607_17308 223
91 3300044842 Ga0466957_0002843 Ga0466957_0002843_7665_8366 223
92 3300044842 Ga0466957_0391464 Ga0466957_0391464_229_939 223
93 3300044901 Ga0466960_0010731 Ga0466960_0010731_2748_3446 223
94 3300044901 Ga0466960_0185756 Ga0466960_0185756_189_884 223
95 3300045049 Ga0466959_0006766 Ga0466959_0006766_5291_5992 223
96 3300045976 Ga0466967_0353916 Ga0466967_0353916_730_1407 223
97 3300048912 Ga0496109_0712110 Ga0496109_0712110_11_688 223
98 3300048915 Ga0496112_0002610 Ga0496112_0002610_13811_14512 223
99 3300048916 Ga0496113_0131929 Ga0496113_0131929_1117_1818 223
100 3300050512 nmdc:mga0n895_91797_c1 nmdc:mga0n895_91797_c1_793_1539 223
101 3300061719 Ga0466962_0029705 Ga0466962_0029705_1337_2038 223
102 3300005458 Ga0070681_10423019 Ga0070681_104230192 224
103 3300006175 Ga0070712_100000006 Ga0070712_10000000679 224
104 3300025912 Ga0207707_10221496 Ga0207707_102214962 224
105 3300025915 Ga0207693_10000078 Ga0207693_1000007862 224
106 3300026075 Ga0207708_10432682 Ga0207708_104326822 224
107 3300031901 Ga0307406_10133358 Ga0307406_101333581 224
108 3300037418 Ga0395900_0483761 Ga0395900_0483761_444_1148 224
109 3300038443 Ga0395901_0631887 Ga0395901_0631887_185_889 224
110 3300044656 Ga0466969_0170249 Ga0466969_0170249_99_815 224
111 3300044684 Ga0466966_0228959 Ga0466966_0228959_258_974 224
112 3300044901 Ga0466960_0000086 Ga0466960_0000086_8680_9411 224
113 3300044901 Ga0466960_0021350 Ga0466960_0021350_1203_1907 224
114 3300044901 Ga0466960_0200277 Ga0466960_0200277_118_819 224
115 3300045049 Ga0466959_0141595 Ga0466959_0141595_474_1190 224
116 3300045049 Ga0466959_0292129 Ga0466959_0292129_382_1098 224
117 3300045976 Ga0466967_0088211 Ga0466967_0088211_1910_2611 224
118 3300046471 Ga0495650_0001091 Ga0495650_0001091_5590_6294 224
119 3300046543 Ga0495645_0000570 Ga0495645_0000570_18290_19000 224
120 3300047471 Ga0495684_0004205 Ga0495684_0004205_3066_3818 224
121 3300048903 Ga0496100_0007743 Ga0496100_0007743_3408_4211 224
122 3300048913 Ga0496110_0354914 Ga0496110_0354914_434_1138 224
123 3300048915 Ga0496112_0000209 Ga0496112_0000209_10632_11372 224
124 3300048918 Ga0496115_0000297 Ga0496115_0000297_34170_34898 224
125 3300048925 Ga0496122_0131966 Ga0496122_0131966_20_748 224
126 3300048927 Ga0496124_0299391 Ga0496124_0299391_158_862 224
127 3300049571 Ga0501034_0087588 Ga0501034_0087588_61_765 224
128 3300053085 Ga0495619_0181040 Ga0495619_0181040_205_960 224
129 3300053153 Ga0500616_0023177 Ga0500616_0023177_2554_3258 224
130 3300005327 Ga0070658_10132449 Ga0070658_101324492 225
131 3300005330 Ga0070690_100570923 Ga0070690_1005709231 225
132 3300005339 Ga0070660_100071489 Ga0070660_1000714892 225
133 3300005339 Ga0070660_100132851 Ga0070660_1001328512 225
134 3300005366 Ga0070659_100000008 Ga0070659_100000008141 225
135 3300005435 Ga0070714_100003642 Ga0070714_1000036427 225
136 3300005435 Ga0070714_100008733 Ga0070714_10000873312 225
137 3300005435 Ga0070714_100155415 Ga0070714_1001554152 225
138 3300005436 Ga0070713_100226786 Ga0070713_1002267862 225
139 3300006028 Ga0070717_10034855 Ga0070717_100348552 225
140 3300006173 Ga0070716_100290947 Ga0070716_1002909472 225
141 3300006852 Ga0075433_10605790 Ga0075433_106057901 225
142 3300009093 Ga0105240_10006301 Ga0105240_100063015 225
143 3300009148 Ga0105243_10642607 Ga0105243_106426071 225
144 3300009545 Ga0105237_10005913 Ga0105237_1000591312 225
145 3300011119 Ga0105246_10049787 Ga0105246_100497872 225
146 3300013297 Ga0157378_10519836 Ga0157378_105198362 225
147 3300014326 Ga0157380_10239325 Ga0157380_102393252 225
148 3300021377 Ga0213874_10021495 Ga0213874_100214952 225
149 3300025906 Ga0207699_10520253 Ga0207699_105202532 225
150 3300025913 Ga0207695_10017454 Ga0207695_100174547 225
151 3300025914 Ga0207671_10004340 Ga0207671_100043407 225
152 3300025915 Ga0207693_10034197 Ga0207693_100341973 225
153 3300025915 Ga0207693_10035537 Ga0207693_100355374 225
154 3300025915 Ga0207693_10214908 Ga0207693_102149082 225
155 3300025919 Ga0207657_10081938 Ga0207657_100819383 225
156 3300025928 Ga0207700_10040234 Ga0207700_100402344 225
157 3300025928 Ga0207700_10286532 Ga0207700_102865322 225
158 3300025929 Ga0207664_10000020 Ga0207664_1000002050 225
159 3300025929 Ga0207664_10003078 Ga0207664_1000307812 225
160 3300025929 Ga0207664_10067683 Ga0207664_100676832 225
161 3300025932 Ga0207690_10000050 Ga0207690_10000050113 225
162 3300025939 Ga0207665_10201369 Ga0207665_102013692 225
163 3300028556 Ga0265337_1001839 Ga0265337_10018394 225
164 3300028558 Ga0265326_10000212 Ga0265326_1000021225 225
165 3300028563 Ga0265319_1000215 Ga0265319_10002157 225
166 3300028577 Ga0265318_10000964 Ga0265318_1000096417 225
167 3300028666 Ga0265336_10000001 Ga0265336_10000001231 225
168 3300028800 Ga0265338_10000532 Ga0265338_1000053239 225
169 3300029957 Ga0265324_10018452 Ga0265324_100184523 225
170 3300031235 Ga0265330_10038332 Ga0265330_100383323 225
171 3300031247 Ga0265340_10000002 Ga0265340_10000002650 225
172 3300031249 Ga0265339_10065688 Ga0265339_100656882 225
173 3300035116 Ga0373945_0050091 Ga0373945_0050091_40_822 225
174 3300036401 Ga0373937_0115866 Ga0373937_0115866_795_1511 225
175 3300039437 Ga0436365_0795993 Ga0436365_0795993_1186_1887 225
176 3300039437 Ga0436365_1190595 Ga0436365_1190595_1326_2087 225
177 3300039450 Ga0436363_0702063 Ga0436363_0702063_213_914 225
178 3300044658 Ga0466972_0063334 Ga0466972_0063334_741_1478 225
179 3300044683 Ga0466965_0012380 Ga0466965_0012380_2831_3550 225
180 3300044684 Ga0466966_0056025 Ga0466966_0056025_90_809 225
181 3300044693 Ga0466961_0077864 Ga0466961_0077864_336_1055 225
182 3300044694 Ga0466963_0004058 Ga0466963_0004058_1729_2448 225
183 3300044719 Ga0466971_0098026 Ga0466971_0098026_87_806 225
184 3300044719 Ga0466971_0103559 Ga0466971_0103559_470_1180 225
185 3300044735 Ga0466968_0067035 Ga0466968_0067035_581_1300 225
186 3300044765 Ga0466970_0004766 Ga0466970_0004766_5692_6411 225
187 3300044765 Ga0466970_0017308 Ga0466970_0017308_2793_3530 225
188 3300044842 Ga0466957_0003447 Ga0466957_0003447_200_919 225
189 3300045049 Ga0466959_0052242 Ga0466959_0052242_2004_2723 225
190 3300045836 Ga0466958_0000371 Ga0466958_0000371_7142_7861 225
191 3300045836 Ga0466958_0071331 Ga0466958_0071331_508_1200 225
192 3300045976 Ga0466967_0013746 Ga0466967_0013746_2524_3243 225
193 3300045976 Ga0466967_0123612 Ga0466967_0123612_1175_1876 225
194 3300045976 Ga0466967_0233303 Ga0466967_0233303_620_1336 225
195 3300046511 Ga0495608_0009975 Ga0495608_0009975_3006_3722 225
196 3300046514 Ga0495618_0070876 Ga0495618_0070876_19_735 225
197 3300046516 Ga0495628_0114585 Ga0495628_0114585_454_1170 225
198 3300046679 Ga0495623_0044941 Ga0495623_0044941_855_1538 225
199 3300047317 Ga0495604_0051285 Ga0495604_0051285_2166_2882 225
200 3300047319 Ga0495674_0094366 Ga0495674_0094366_1619_2335 225
201 3300047320 Ga0495672_0196599 Ga0495672_0196599_110_871 225
202 3300047322 Ga0495680_0011747 Ga0495680_0011747_6552_7268 225
203 3300047471 Ga0495684_0013407 Ga0495684_0013407_1199_1915 225
204 3300048903 Ga0496100_0070271 Ga0496100_0070271_989_1702 225
205 3300048904 Ga0496101_0007050 Ga0496101_0007050_3559_4272 225
206 3300048905 Ga0496102_0000002 Ga0496102_0000002_577979_578689 225
207 3300048905 Ga0496102_0019810 Ga0496102_0019810_2630_3343 225
208 3300048906 Ga0496103_0000017 Ga0496103_0000017_171196_171906 225
209 3300048907 Ga0496104_0640722 Ga0496104_0640722_227_958 225
210 3300048909 Ga0496106_0031377 Ga0496106_0031377_1795_2508 225
211 3300048911 Ga0496108_0037677 Ga0496108_0037677_948_1715 225
212 3300048915 Ga0496112_0102694 Ga0496112_0102694_1410_2129 225
213 3300048918 Ga0496115_0010602 Ga0496115_0010602_2871_3584 225
214 3300050515 nmdc:mga0a205_565054_c1 nmdc:mga0a205_565054_c1_172_885 225
215 3300053085 Ga0495619_0183586 Ga0495619_0183586_253_969 225
216 3300061719 Ga0466962_0113947 Ga0466962_0113947_308_1018 225

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00376

MerR

MerR family regulatory protein

40

65

0.95

PF13411

MerR_1

MerR HTH family regulatory protein

39

112

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
6jyw-assembly1.cif.gz_A crystal structure of the transcription regulator cadr n81m mutant from p. putida in complex with cadmium(ii) and dna 0.8895 2 68
6jyw-assembly1.cif.gz_B crystal structure of the transcription regulator cadr n81m mutant from p. putida in complex with cadmium(ii) and dna 0.8895 2 68
2zhg-assembly1.cif.gz_A-2 crystal structure of soxr in complex with dna 0.8776 2 67
4r4e-assembly1.cif.gz_A structure of glnr-dna complex 0.856 2 69
3d6y-assembly1.cif.gz_A crystal structure of r275e mutant of bmrr bound to dna and berberine 0.8391 2 68
ID Description Score Start End Superfamily
af_O06302_4_79_1.10.1660.10 Mainly Alpha;Orthogonal Bundle;Multidrug-efflux Transporter Regulator; Chain: A; Domain 2; 0.9171 2 66 1.10.1660.10
af_P9WME7_10_96_1.10.1660.10 Mainly Alpha;Orthogonal Bundle;Multidrug-efflux Transporter Regulator; Chain: A; Domain 2; 0.8819 10 68 1.10.1660.10
4r22B00 Mainly Alpha;Orthogonal Bundle;Multidrug-efflux Transporter Regulator; Chain: A; Domain 2; 0.8683 1 71 1.10.1660.10
4r4eA00 Mainly Alpha;Orthogonal Bundle;Multidrug-efflux Transporter Regulator; Chain: A; Domain 2; 0.856 2 69 1.10.1660.10
1exjA02 Mainly Alpha;Orthogonal Bundle;Multidrug-efflux Transporter Regulator; Chain: A; Domain 2; 0.8423 2 68 1.10.1660.10
ID Description Score Start End GO Terms
AF-A0A838PI84-F1-model_v4 MerR family transcriptional regulator 0.9732 4 67 GO:0003677
GO:0003700
AF-A0A1H6FNZ1-F1-model_v4 DNA-binding transcriptional regulator, MerR family 0.9609 2 225 GO:0003677
GO:0003700
AF-A0A1H6FNZ1-F1-model_v4 DNA-binding transcriptional regulator, MerR family 0.9444 2 225 GO:0003677
GO:0003700
AF-A0A538KLA3-F1-model_v4 MerR family transcriptional regulator 0.9293 2 82 GO:0003677
GO:0003700
AF-A0A538ITU8-F1-model_v4 MerR family transcriptional regulator 0.9234 2 225 GO:0003677
GO:0003700

Feature Viewer

pLDDT pTM Quality
86.54 0.71 High
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Predicted Structure (AlphaFold2)

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