F323174

General Info

Members Datasets Scaffolds Average Seq Length
212 166 206 328

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0083689|Ga0453684_0083689_569_1762
Length 379
Sequence MTGKDRYKSALNVMKGVEQPSQINEAAAGKIRSHRPRILPAREYLDGILAGNRTILSKAITLVESNLPAHRERAEEVIAGCLKHEKITDSGYRLPAGQAGISDNHHPSIGITGVPGVGKSTFIEALGTSLTEKGHKLAVLAIDPSSSRSKGSILGDKTRMETLATDPNAFIRPSPSAGSLGGVARKTRETIILCEAAGFDVIFIETVGVGQSETTVHSMVDFFLLLMLAGAGDELQGIKRGIIEMADAIVINKADGDNINKAMTARVEYANALALFPPPGTGWMPVAEICSARTRTGIDRVWELVTEHRRITGETGAFRRRRMEQDLQVFRDTIEAGLQQHFYGRKEAATTIHRLEQEIMNGTANPYQAANDLLNNYFG

Samples

Sample ID Description Type Environment
1 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
2 2828305725 Xanthobacter tagetidis DSM 11105 Isolate Unclassified
3 2915358134 Pseudonocardia pini CAP47R Isolate Unclassified
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
21 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
22 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
42 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
43 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
44 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
45 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
62 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
63 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
64 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
65 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
66 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
67 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
68 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
69 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
70 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
71 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
72 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
73 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
74 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
75 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
76 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
77 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
78 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
79 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
80 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
81 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
82 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
83 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
84 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
85 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
86 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
87 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
88 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
89 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
90 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
91 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
92 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
93 3300042120 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_082316_2192 Metagenome Rhizosphere
94 3300042144 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 Metagenome Rhizosphere
95 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
96 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
97 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
98 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
99 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
100 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
101 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
102 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
103 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
104 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
105 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
106 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
107 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
108 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
109 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
110 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
111 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
112 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
113 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
114 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
115 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
116 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
117 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
118 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
119 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
120 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
121 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
122 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
123 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
124 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
125 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
126 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
127 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
128 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
129 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
130 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
131 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
132 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
133 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
134 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
135 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
136 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
137 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
138 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
139 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
140 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
141 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
142 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
143 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
144 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
145 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
146 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
148 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
149 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
150 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
151 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
152 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
153 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
154 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
155 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
156 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
157 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
158 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
159 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
160 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
161 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
162 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
163 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
164 8036736890 Flavobacterium dauae TCH3-2 Isolate Rhizosphere
165 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere
166 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.17
Metatranscriptomes 0
Isolates 2.83

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.77
Nodule 0
Rhizoplane 8.49
Rhizosphere 65.57
Stem 0
Stem Tuber 0
Unclassified 22.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070670_100010109 3300005331 Bacteria 8049
2 Ga0070680_100071718 3300005336 Bacteria 2846
3 Ga0068868_100271503 3300005338 Bacteria 1433
4 Ga0070660_100031209 3300005339 Bacteria 4001
5 Ga0070689_100276013 3300005340 Bacteria 1393
6 Ga0070661_100066883 3300005344 Bacteria 2640
7 Ga0070692_10130711 3300005345 Bacteria 1411
8 Ga0070668_100308555 3300005347 Bacteria 1329
9 Ga0070671_100002796 3300005355 Bacteria 13561
10 Ga0070714_100028445 3300005435 Bacteria 4638
11 Ga0070705_100009389 3300005440 Bacteria 4863
12 Ga0070694_100211709 3300005444 Bacteria 1450
13 Ga0070663_100003340 3300005455 Bacteria 9259
14 Ga0070678_100077979 3300005456 Bacteria 2501
15 Ga0070681_10112863 3300005458 Bacteria 2657
16 Ga0070698_100033682 3300005471 Bacteria 5306
17 Ga0070698_100156354 3300005471 Bacteria 2226
18 Ga0070695_100075707 3300005545 Bacteria 2215
19 Ga0070696_100010813 3300005546 Bacteria 6115
20 Ga0070693_100082317 3300005547 Bacteria 1921
21 Ga0070665_100001599 3300005548 Bacteria 26065
22 Ga0070704_100011989 3300005549 Bacteria 5340
23 Ga0070704_100123448 3300005549 Bacteria 1994
24 Ga0068857_100177171 3300005577 Bacteria 1940
25 Ga0070702_100183577 3300005615 Bacteria 1371
26 Ga0068859_100022412 3300005617 Bacteria 6332
27 Ga0068863_100012915 3300005841 Bacteria 8053
28 Ga0068860_100050915 3300005843 Bacteria 3942
29 Ga0068860_100348040 3300005843 Bacteria 1458
30 Ga0081455_10032088 3300005937 Bacteria 4739
31 Ga0075428_100046496 3300006844 Bacteria 4767
32 Ga0075431_100008590 3300006847 Bacteria 10224
33 Ga0075429_100003943 3300006880 Bacteria 12691
34 Ga0097620_100022412 3300006931 Bacteria 6332
35 Ga0111539_10128356 3300009094 Bacteria 2970
36 Ga0111539_10535454 3300009094 Bacteria 1364
37 Ga0105245_10084302 3300009098 Bacteria 2911
38 Ga0105245_10183710 3300009098 Bacteria 1999
39 Ga0114129_10007262 3300009147 Bacteria 15773
40 Ga0114129_10187857 3300009147 Bacteria 2807
41 Ga0105243_10219716 3300009148 Bacteria 1679
42 Ga0105237_10055201 3300009545 Bacteria 3979
43 Ga0105239_10269944 3300010375 Bacteria 1913
44 Ga0163162_10126656 3300013306 Bacteria 2661
45 Ga0157375_10114894 3300013308 Bacteria 2794
46 Ga0157379_10124433 3300014968 Bacteria 2320
47 Ga0157379_10205090 3300014968 Bacteria 1783
48 Ga0228598_1006859 3300024227 Bacteria 2339
49 Ga0207693_10085722 3300025915 Bacteria 2467
50 Ga0207663_10054659 3300025916 Bacteria 2501
51 Ga0207660_10009313 3300025917 Bacteria 6357
52 Ga0207657_10065092 3300025919 Bacteria 3109
53 Ga0207649_10082913 3300025920 Bacteria 2080
54 Ga0207690_10023944 3300025932 Bacteria 3818
55 Ga0207670_10202891 3300025936 Bacteria 1508
56 Ga0207679_10049329 3300025945 Bacteria 3071
57 Ga0207640_10226114 3300025981 Bacteria 1436
58 Ga0207658_10000860 3300025986 Bacteria 25382
59 Ga0207639_10048857 3300026041 Bacteria 3204
60 Ga0207678_10000337 3300026067 Bacteria 42242
61 Ga0207641_10001768 3300026088 Bacteria 20818
62 Ga0207676_10086109 3300026095 Bacteria 2566
63 Ga0207683_10187076 3300026121 Bacteria 1879
64 Ga0268264_10029254 3300028381 Bacteria 4511
65 Ga0268264_10329527 3300028381 Bacteria 1446
66 Ga0307517_10001025 3300028786 Bacteria 47474
67 Ga0307515_10156444 3300028794 Bacteria 2349
68 Ga0307515_10182304 3300028794 Bacteria 2044
69 Ga0307513_10003195 3300031456 Bacteria 22371
70 Ga0307513_10122794 3300031456 Bacteria 2560
71 Ga0307509_10000092 3300031507 Bacteria 124019
72 Ga0307509_10014129 3300031507 Bacteria 9412
73 Ga0307509_10056955 3300031507 Bacteria 4146
74 Ga0307508_10001570 3300031616 Bacteria 25499
75 Ga0307508_10108651 3300031616 Bacteria 2373
76 Ga0307508_10133865 3300031616 Bacteria 2081
77 Ga0307508_10137452 3300031616 Bacteria 2047
78 Ga0316576_10010491 3300031727 Bacteria 6023
79 Ga0316576_10022785 3300031727 Bacteria 4355
80 Ga0316576_10047557 3300031727 Bacteria 3109
81 Ga0316578_10034846 3300031728 Bacteria 2892
82 Ga0307516_10117716 3300031730 Bacteria 2451
83 Ga0307516_10340531 3300031730 Bacteria 1167
84 Ga0307414_10032824 3300032004 Bacteria 3423
85 Ga0307415_100209783 3300032126 Bacteria 1553
86 Ga0307507_10208354 3300033179 Bacteria 1338
87 Ga0307510_10014198 3300033180 Bacteria 9433
88 Ga0307510_10096601 3300033180 Bacteria 2769
89 Ga0307510_10190803 3300033180 Bacteria 1597
90 Ga0307510_10244273 3300033180 Bacteria 1287
91 Ga0373957_0058984 3300035120 Bacteria 1484
92 Ga0373943_0022770 3300035170 Bacteria 2908
93 Ga0373943_0059432 3300035170 Bacteria 1905
94 Ga0373946_0081232 3300035171 Bacteria 1420
95 Ga0373955_0102336 3300035172 Bacteria 1646
96 Ga0316574_0063887 3300035398 Bacteria 2316
97 Ga0373931_0016836 3300035691 Bacteria 3605
98 Ga0373935_0127719 3300035692 Bacteria 1705
99 Ga0373935_0141167 3300035692 Bacteria 1627
100 Ga0373935_0207369 3300035692 Bacteria 1357
101 Ga0316584_0025647 3300036712 Bacteria 4325
102 Ga0373925_0077350 3300037068 Bacteria 2525
103 Ga0373925_0200589 3300037068 Bacteria 1586
104 Ga0436364_0005665 3300037853 Bacteria 2727
105 Ga0400485_04758 3300038735 Bacteria 18420
106 Ga0400485_06903 3300038735 Bacteria 19235
107 Ga0400488_34932 3300038741 Bacteria 3831
108 Ga0400486_13088 3300038742 Bacteria 11914
109 Ga0400486_17151 3300038742 Bacteria 23386
110 Ga0400483_015176 3300039062 Bacteria 70989
111 Ga0400483_140318 3300039062 Bacteria 97528
112 Ga0400483_222800 3300039062 Bacteria 244239
113 Ga0400489_29236 3300039093 Bacteria 20385
114 Ga0400487_01727 3300039110 Bacteria 18916
115 Ga0400487_11891 3300039110 Bacteria 1606
116 Ga0436365_1643349 3300039437 Bacteria 1806
117 Ga0436360_0566947 3300039438 Bacteria 1618
118 Ga0436363_0716381 3300039450 Bacteria 3861
119 Ga0439431_0026013 3300041997 Bacteria 1432
120 Ga0450917_000711 3300042120 Bacteria 2460
121 Ga0450889_000729 3300042144 Bacteria 3534
122 Ga0451577_0199167 3300042876 Bacteria 1808
123 Ga0466972_0011990 3300044658 Bacteria 4355
124 Ga0466965_0005634 3300044683 Bacteria 5654
125 Ga0453684_0083689 3300044712 Bacteria 3970
126 Ga0453684_0125247 3300044712 Bacteria 3094
127 Ga0466970_0011064 3300044765 Bacteria 4593
128 Ga0466960_0002200 3300044901 Bacteria 7281
129 Ga0466960_0029617 3300044901 Bacteria 2513
130 Ga0451576_0019820 3300045051 Bacteria 7336
131 Ga0451576_0082499 3300045051 Bacteria 3344
132 Ga0451576_0107197 3300045051 Bacteria 2907
133 Ga0495651_0057621 3300046462 Bacteria 2982
134 Ga0495580_0141350 3300046472 Bacteria 1668
135 Ga0495608_0157079 3300046511 Bacteria 1447
136 Ga0495628_0102986 3300046516 Bacteria 2201
137 Ga0495628_0110395 3300046516 Bacteria 2116
138 Ga0495652_0129882 3300046529 Bacteria 1996
139 Ga0495640_0070224 3300046533 Bacteria 2354
140 Ga0495587_0162462 3300046536 Bacteria 1270
141 Ga0495645_0048726 3300046543 Bacteria 3085
142 Ga0495622_0087575 3300046557 Bacteria 1432
143 Ga0495668_0079883 3300046616 Bacteria 1795
144 Ga0495634_0015998 3300046642 Bacteria 5373
145 Ga0495635_0029243 3300046663 Bacteria 3831
146 Ga0495657_0049536 3300046675 Bacteria 2829
147 Ga0495623_0048985 3300046679 Bacteria 2678
148 Ga0495646_0139908 3300046680 Bacteria 1354
149 Ga0495647_0115467 3300046681 Bacteria 1124
150 Ga0495658_0246907 3300046683 Bacteria 1122
151 Ga0495624_0092217 3300046690 Bacteria 1868
152 Ga0495581_0171828 3300047315 Bacteria 1267
153 Ga0495674_0020250 3300047319 Bacteria 6160
154 Ga0495680_0062144 3300047322 Bacteria 2872
155 Ga0495675_0052331 3300047444 Bacteria 2593
156 Ga0495684_0032115 3300047471 Bacteria 4029
157 Ga0495593_0111437 3300047673 Bacteria 1397
158 Ga0495602_0351059 3300048088 Bacteria 1064
159 Ga0496100_0005524 3300048903 Bacteria 6822
160 Ga0496100_0193987 3300048903 Bacteria 1476
161 Ga0496101_0004601 3300048904 Bacteria 8714
162 Ga0496102_0000020 3300048905 Bacteria 260823
163 Ga0496102_0007412 3300048905 Bacteria 9367
164 Ga0496102_0128810 3300048905 Bacteria 2367
165 Ga0496103_0000011 3300048906 Bacteria 304506
166 Ga0496103_0027520 3300048906 Bacteria 3445
167 Ga0496104_0027456 3300048907 Bacteria 5267
168 Ga0496105_0008726 3300048908 Bacteria 7887
169 Ga0496105_0199416 3300048908 Bacteria 1634
170 Ga0496106_0030006 3300048909 Bacteria 4054
171 Ga0496106_0131815 3300048909 Bacteria 1961
172 Ga0496111_0173999 3300048914 Bacteria 1600
173 Ga0496112_0021692 3300048915 Bacteria 6110
174 Ga0496112_0145471 3300048915 Bacteria 2339
175 Ga0496115_0023501 3300048918 Bacteria 4783
176 Ga0496115_0271834 3300048918 Bacteria 1392
177 Ga0496116_0000067 3300048919 Bacteria 260793
178 Ga0496117_0000192 3300048920 Bacteria 124451
179 Ga0496118_0000076 3300048921 Bacteria 193263
180 Ga0496119_0003274 3300048922 Bacteria 16939
181 Ga0496120_0029325 3300048923 Bacteria 3360
182 Ga0496121_0005915 3300048924 Bacteria 15478
183 Ga0496124_0077928 3300048927 Bacteria 2732
184 Ga0496125_0027854 3300048928 Bacteria 5112
185 Ga0496126_0000048 3300048929 Bacteria 317977
186 Ga0496126_0000080 3300048929 Bacteria 221672
187 Ga0501034_0095657 3300049571 Bacteria 2967
188 Ga0501070_0040413 3300049586 Bacteria 3888
189 Ga0501077_0035478 3300049593 Bacteria 3175
190 nmdc:mga0k408_201418_c1 3300050493 Bacteria 1188
191 nmdc:mga05p37_37260_c1 3300050507 Bacteria 5963
192 nmdc:mga09592_12608_c1 3300050508 Bacteria 6890
193 nmdc:mga06r32_303199_c1 3300050510 Bacteria 1583
194 nmdc:mga06r32_42987_c1 3300050510 Bacteria 4298
195 nmdc:mga08y16_140538_c1 3300050511 Bacteria 2510
196 nmdc:mga08y16_565753_c1 3300050511 Bacteria 1149
197 Ga0495595_0007030 3300053084 Bacteria 4598
198 Ga0495619_0156764 3300053085 Bacteria 1571
199 Ga0500644_0029177 3300053088 Bacteria 1732
200 Ga0500556_0002512 3300053104 Bacteria 5840
201 Ga0500562_005815 3300053108 Bacteria 3104
202 Ga0500559_0000017 3300053136 Bacteria 143646
203 Ga0500590_049397 3300053148 Bacteria 2141
204 Ga0500622_0061259 3300053156 Bacteria 1918
205 Ga0500625_020543 3300053729 Bacteria 3108
206 Ga0466962_0119897 3300061719 Bacteria 1269

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048918 Ga0496115_0271834 Ga0496115_0271834_54_884 273
2 3300049593 Ga0501077_0035478 Ga0501077_0035478_13_867 279
3 3300039110 Ga0400487_11891 Ga0400487_11891_686_1558 284
4 3300048088 Ga0495602_0351059 Ga0495602_0351059_183_1037 284
5 3300009098 Ga0105245_10084302 Ga0105245_100843024 294
6 3300013306 Ga0163162_10126656 Ga0163162_101266564 295
7 3300031727 Ga0316576_10010491 Ga0316576_100104912 305
8 3300031728 Ga0316578_10034846 Ga0316578_100348462 305
9 3300050493 nmdc:mga0k408_201418_c1 nmdc:mga0k408_201418_c1_74_1063 310
10 3300042120 Ga0450917_000711 Ga0450917_000711_851_1819 311
11 3300042144 Ga0450889_000729 Ga0450889_000729_928_1896 311
12 3300005345 Ga0070692_10130711 Ga0070692_101307112 312
13 3300005549 Ga0070704_100011989 Ga0070704_1000119894 312
14 3300053148 Ga0500590_049397 Ga0500590_049397_349_1305 312
15 iso_pu_bacteria 8054563764 8054567719 312
16 3300053104 Ga0500556_0002512 Ga0500556_0002512_2380_3378 313
17 3300005336 Ga0070680_100071718 Ga0070680_1000717182 314
18 3300005339 Ga0070660_100031209 Ga0070660_1000312093 314
19 3300005344 Ga0070661_100066883 Ga0070661_1000668832 314
20 3300005440 Ga0070705_100009389 Ga0070705_1000093892 314
21 3300005444 Ga0070694_100211709 Ga0070694_1002117092 314
22 3300005455 Ga0070663_100003340 Ga0070663_1000033403 314
23 3300005456 Ga0070678_100077979 Ga0070678_1000779792 314
24 3300005458 Ga0070681_10112863 Ga0070681_101128632 314
25 3300005545 Ga0070695_100075707 Ga0070695_1000757072 314
26 3300005546 Ga0070696_100010813 Ga0070696_1000108133 314
27 3300005547 Ga0070693_100082317 Ga0070693_1000823171 314
28 3300005615 Ga0070702_100183577 Ga0070702_1001835771 314
29 3300009094 Ga0111539_10535454 Ga0111539_105354542 314
30 3300009098 Ga0105245_10183710 Ga0105245_101837101 314
31 3300009545 Ga0105237_10055201 Ga0105237_100552012 314
32 3300010375 Ga0105239_10269944 Ga0105239_102699441 314
33 3300013308 Ga0157375_10114894 Ga0157375_101148943 314
34 3300025917 Ga0207660_10009313 Ga0207660_100093131 314
35 3300025919 Ga0207657_10065092 Ga0207657_100650922 314
36 3300025920 Ga0207649_10082913 Ga0207649_100829131 314
37 3300025932 Ga0207690_10023944 Ga0207690_100239442 314
38 3300025945 Ga0207679_10049329 Ga0207679_100493292 314
39 3300025981 Ga0207640_10226114 Ga0207640_102261142 314
40 3300026041 Ga0207639_10048857 Ga0207639_100488573 314
41 3300026067 Ga0207678_10000337 Ga0207678_1000033734 314
42 3300026121 Ga0207683_10187076 Ga0207683_101870762 314
43 3300028794 Ga0307515_10156444 Ga0307515_101564442 314
44 3300031456 Ga0307513_10122794 Ga0307513_101227942 314
45 3300031507 Ga0307509_10014129 Ga0307509_100141292 314
46 3300032126 Ga0307415_100209783 Ga0307415_1002097832 314
47 3300033180 Ga0307510_10096601 Ga0307510_100966012 314
48 3300046690 Ga0495624_0092217 Ga0495624_0092217_446_1390 314
49 3300047673 Ga0495593_0111437 Ga0495593_0111437_71_1015 314
50 3300048903 Ga0496100_0193987 Ga0496100_0193987_49_1053 314
51 3300048905 Ga0496102_0007412 Ga0496102_0007412_6358_7362 314
52 3300048906 Ga0496103_0027520 Ga0496103_0027520_847_1851 314
53 3300048908 Ga0496105_0199416 Ga0496105_0199416_420_1421 314
54 3300048909 Ga0496106_0030006 Ga0496106_0030006_2568_3572 314
55 3300048918 Ga0496115_0023501 Ga0496115_0023501_2934_3938 314
56 3300053108 Ga0500562_005815 Ga0500562_005815_78_1079 314
57 iso_pu_bacteria 2643221639 2644221469 314
58 3300038735 Ga0400485_06903 Ga0400485_06903_893_1888 316
59 3300038741 Ga0400488_34932 Ga0400488_34932_743_1738 316
60 3300038742 Ga0400486_17151 Ga0400486_17151_16356_17351 316
61 3300039093 Ga0400489_29236 Ga0400489_29236_5652_6647 316
62 3300039110 Ga0400487_01727 Ga0400487_01727_1584_2579 316
63 3300009147 Ga0114129_10187857 Ga0114129_101878572 317
64 3300039062 Ga0400483_015176 Ga0400483_015176_15337_16302 319
65 3300039062 Ga0400483_140318 Ga0400483_140318_66244_67209 319
66 3300039062 Ga0400483_222800 Ga0400483_222800_9925_10890 319
67 3300039438 Ga0436360_0566947 Ga0436360_0566947_90_1064 321
68 3300046529 Ga0495652_0129882 Ga0495652_0129882_1021_1986 321
69 3300005471 Ga0070698_100033682 Ga0070698_1000336822 322
70 3300006844 Ga0075428_100046496 Ga0075428_1000464962 322
71 3300006847 Ga0075431_100008590 Ga0075431_1000085902 322
72 3300006880 Ga0075429_100003943 Ga0075429_10000394312 322
73 3300009147 Ga0114129_10007262 Ga0114129_1000726210 322
74 3300014968 Ga0157379_10205090 Ga0157379_102050902 322
75 3300025986 Ga0207658_10000860 Ga0207658_1000086021 322
76 3300028786 Ga0307517_10001025 Ga0307517_1000102526 322
77 3300028794 Ga0307515_10182304 Ga0307515_101823042 322
78 3300031456 Ga0307513_10003195 Ga0307513_100031953 322
79 3300031507 Ga0307509_10000092 Ga0307509_1000009222 322
80 3300031507 Ga0307509_10056955 Ga0307509_100569553 322
81 3300031616 Ga0307508_10001570 Ga0307508_100015702 322
82 3300031616 Ga0307508_10108651 Ga0307508_101086512 322
83 3300031616 Ga0307508_10133865 Ga0307508_101338652 322
84 3300031616 Ga0307508_10137452 Ga0307508_101374522 322
85 3300031730 Ga0307516_10117716 Ga0307516_101177162 322
86 3300031730 Ga0307516_10340531 Ga0307516_103405312 322
87 3300033179 Ga0307507_10208354 Ga0307507_102083541 322
88 3300033180 Ga0307510_10014198 Ga0307510_100141989 322
89 3300033180 Ga0307510_10190803 Ga0307510_101908032 322
90 3300033180 Ga0307510_10244273 Ga0307510_102442732 322
91 3300035171 Ga0373946_0081232 Ga0373946_0081232_123_1097 322
92 3300035691 Ga0373931_0016836 Ga0373931_0016836_1393_2367 322
93 3300037068 Ga0373925_0200589 Ga0373925_0200589_428_1402 322
94 3300046557 Ga0495622_0087575 Ga0495622_0087575_218_1192 322
95 3300050507 nmdc:mga05p37_37260_c1 nmdc:mga05p37_37260_c1_2236_3240 322
96 3300050508 nmdc:mga09592_12608_c1 nmdc:mga09592_12608_c1_4402_5406 322
97 3300050510 nmdc:mga06r32_42987_c1 nmdc:mga06r32_42987_c1_1480_2484 322
98 3300053088 Ga0500644_0029177 Ga0500644_0029177_361_1335 322
99 3300053136 Ga0500559_0000017 Ga0500559_0000017_115419_116393 322
100 3300053156 Ga0500622_0061259 Ga0500622_0061259_645_1619 322
101 iso_pu_bacteria 2828305725 2828306129 322
102 iso_pu_bacteria 2915358134 2915360795 322
103 3300005549 Ga0070704_100123448 Ga0070704_1001234482 323
104 3300009148 Ga0105243_10219716 Ga0105243_102197162 323
105 3300041997 Ga0439431_0026013 Ga0439431_0026013_128_1141 323
106 3300045051 Ga0451576_0019820 Ga0451576_0019820_6225_7214 323
107 3300049586 Ga0501070_0040413 Ga0501070_0040413_2498_3496 323
108 iso_pu_bacteria 8054472261 8054475902 323
109 3300005338 Ga0068868_100271503 Ga0068868_1002715033 324
110 3300005340 Ga0070689_100276013 Ga0070689_1002760132 324
111 3300005471 Ga0070698_100156354 Ga0070698_1001563542 324
112 3300005577 Ga0068857_100177171 Ga0068857_1001771712 324
113 3300005617 Ga0068859_100022412 Ga0068859_1000224123 324
114 3300005843 Ga0068860_100348040 Ga0068860_1003480402 324
115 3300006931 Ga0097620_100022412 Ga0097620_1000224123 324
116 3300009094 Ga0111539_10128356 Ga0111539_101283562 324
117 3300025936 Ga0207670_10202891 Ga0207670_102028912 324
118 3300028381 Ga0268264_10329527 Ga0268264_103295272 324
119 3300045051 Ga0451576_0107197 Ga0451576_0107197_1554_2546 324
120 3300046616 Ga0495668_0079883 Ga0495668_0079883_491_1510 324
121 3300050510 nmdc:mga06r32_303199_c1 nmdc:mga06r32_303199_c1_345_1340 324
122 3300050511 nmdc:mga08y16_140538_c1 nmdc:mga08y16_140538_c1_357_1352 324
123 3300050511 nmdc:mga08y16_565753_c1 nmdc:mga08y16_565753_c1_50_1045 324
124 3300005435 Ga0070714_100028445 Ga0070714_1000284452 325
125 3300031727 Ga0316576_10047557 Ga0316576_100475573 325
126 3300035398 Ga0316574_0063887 Ga0316574_0063887_550_1632 325
127 3300036712 Ga0316584_0025647 Ga0316584_0025647_1029_2090 325
128 3300048929 Ga0496126_0000048 Ga0496126_0000048_250433_251413 325
129 3300005347 Ga0070668_100308555 Ga0070668_1003085552 326
130 3300005355 Ga0070671_100002796 Ga0070671_10000279611 326
131 3300005548 Ga0070665_100001599 Ga0070665_10000159914 326
132 3300005841 Ga0068863_100012915 Ga0068863_1000129152 326
133 3300005843 Ga0068860_100050915 Ga0068860_1000509153 326
134 3300014968 Ga0157379_10124433 Ga0157379_101244332 326
135 3300026088 Ga0207641_10001768 Ga0207641_100017682 326
136 3300026095 Ga0207676_10086109 Ga0207676_100861092 326
137 3300028381 Ga0268264_10029254 Ga0268264_100292543 326
138 3300038735 Ga0400485_04758 Ga0400485_04758_8791_9804 326
139 3300038742 Ga0400486_13088 Ga0400486_13088_9025_10038 326
140 3300048903 Ga0496100_0005524 Ga0496100_0005524_2813_3793 326
141 3300048904 Ga0496101_0004601 Ga0496101_0004601_1551_2531 326
142 3300048905 Ga0496102_0000020 Ga0496102_0000020_101455_102435 326
143 3300048906 Ga0496103_0000011 Ga0496103_0000011_212698_213678 326
144 3300048907 Ga0496104_0027456 Ga0496104_0027456_35_1015 326
145 3300048908 Ga0496105_0008726 Ga0496105_0008726_6813_7793 326
146 3300048919 Ga0496116_0000067 Ga0496116_0000067_101440_102420 326
147 3300048920 Ga0496117_0000192 Ga0496117_0000192_22155_23135 326
148 3300048921 Ga0496118_0000076 Ga0496118_0000076_101429_102409 326
149 3300048922 Ga0496119_0003274 Ga0496119_0003274_909_1889 326
150 3300048923 Ga0496120_0029325 Ga0496120_0029325_86_1066 326
151 3300048924 Ga0496121_0005915 Ga0496121_0005915_6621_7601 326
152 3300048927 Ga0496124_0077928 Ga0496124_0077928_273_1253 326
153 3300048928 Ga0496125_0027854 Ga0496125_0027854_1342_2322 326
154 3300048929 Ga0496126_0000080 Ga0496126_0000080_119191_120171 326
155 iso_pu_bacteria 8036736890 8036738638 326
156 3300044658 Ga0466972_0011990 Ga0466972_0011990_2534_3517 327
157 3300044683 Ga0466965_0005634 Ga0466965_0005634_2913_3896 327
158 3300044765 Ga0466970_0011064 Ga0466970_0011064_2331_3314 327
159 3300044901 Ga0466960_0002200 Ga0466960_0002200_2814_3797 327
160 3300053729 Ga0500625_020543 Ga0500625_020543_1547_2563 328
161 3300061719 Ga0466962_0119897 Ga0466962_0119897_239_1225 328
162 3300044712 Ga0453684_0083689 Ga0453684_0083689_569_1762 329
163 3300044901 Ga0466960_0029617 Ga0466960_0029617_1182_2273 329
164 3300005331 Ga0070670_100010109 Ga0070670_1000101091 330
165 3300005937 Ga0081455_10032088 Ga0081455_100320883 330
166 3300024227 Ga0228598_1006859 Ga0228598_10068593 330
167 3300025915 Ga0207693_10085722 Ga0207693_100857221 330
168 3300025916 Ga0207663_10054659 Ga0207663_100546592 330
169 3300031727 Ga0316576_10022785 Ga0316576_100227852 330
170 3300032004 Ga0307414_10032824 Ga0307414_100328242 330
171 3300035120 Ga0373957_0058984 Ga0373957_0058984_67_1059 330
172 3300035170 Ga0373943_0022770 Ga0373943_0022770_807_1799 330
173 3300035170 Ga0373943_0059432 Ga0373943_0059432_488_1483 330
174 3300035172 Ga0373955_0102336 Ga0373955_0102336_262_1272 330
175 3300035692 Ga0373935_0127719 Ga0373935_0127719_519_1529 330
176 3300035692 Ga0373935_0141167 Ga0373935_0141167_296_1291 330
177 3300035692 Ga0373935_0207369 Ga0373935_0207369_225_1217 330
178 3300037068 Ga0373925_0077350 Ga0373925_0077350_1103_2113 330
179 3300037853 Ga0436364_0005665 Ga0436364_0005665_1217_2224 330
180 3300039437 Ga0436365_1643349 Ga0436365_1643349_515_1519 330
181 3300039450 Ga0436363_0716381 Ga0436363_0716381_2719_3726 330
182 3300042876 Ga0451577_0199167 Ga0451577_0199167_337_1434 330
183 3300044712 Ga0453684_0125247 Ga0453684_0125247_1626_2723 330
184 3300045051 Ga0451576_0082499 Ga0451576_0082499_39_1154 330
185 3300046462 Ga0495651_0057621 Ga0495651_0057621_1316_2308 330
186 3300046472 Ga0495580_0141350 Ga0495580_0141350_604_1614 330
187 3300046511 Ga0495608_0157079 Ga0495608_0157079_170_1162 330
188 3300046516 Ga0495628_0102986 Ga0495628_0102986_1143_2135 330
189 3300046516 Ga0495628_0110395 Ga0495628_0110395_153_1163 330
190 3300046533 Ga0495640_0070224 Ga0495640_0070224_756_1748 330
191 3300046536 Ga0495587_0162462 Ga0495587_0162462_266_1258 330
192 3300046543 Ga0495645_0048726 Ga0495645_0048726_1918_2910 330
193 3300046642 Ga0495634_0015998 Ga0495634_0015998_2013_3005 330
194 3300046663 Ga0495635_0029243 Ga0495635_0029243_893_1885 330
195 3300046675 Ga0495657_0049536 Ga0495657_0049536_1606_2598 330
196 3300046679 Ga0495623_0048985 Ga0495623_0048985_902_1894 330
197 3300046680 Ga0495646_0139908 Ga0495646_0139908_208_1200 330
198 3300046681 Ga0495647_0115467 Ga0495647_0115467_39_1031 330
199 3300046683 Ga0495658_0246907 Ga0495658_0246907_102_1094 330
200 3300047315 Ga0495581_0171828 Ga0495581_0171828_218_1210 330
201 3300047319 Ga0495674_0020250 Ga0495674_0020250_2954_3964 330
202 3300047322 Ga0495680_0062144 Ga0495680_0062144_1676_2668 330
203 3300047444 Ga0495675_0052331 Ga0495675_0052331_413_1405 330
204 3300047471 Ga0495684_0032115 Ga0495684_0032115_1408_2400 330
205 3300048905 Ga0496102_0128810 Ga0496102_0128810_506_1513 330
206 3300048909 Ga0496106_0131815 Ga0496106_0131815_423_1430 330
207 3300048914 Ga0496111_0173999 Ga0496111_0173999_58_1065 330
208 3300048915 Ga0496112_0021692 Ga0496112_0021692_2703_3710 330
209 3300048915 Ga0496112_0145471 Ga0496112_0145471_64_1056 330
210 3300049571 Ga0501034_0095657 Ga0501034_0095657_374_1417 330
211 3300053084 Ga0495595_0007030 Ga0495595_0007030_1924_2916 330
212 3300053085 Ga0495619_0156764 Ga0495619_0156764_513_1505 330

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03308

MeaB

Methylmalonyl Co-A mutase-associated GTPase MeaB

56

347

0.91

PF02492

cobW

CobW/HypB/UreG, nucleotide-binding domain

107

275

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
2qm7-assembly1.cif.gz_B meab, a bacterial homolog of mmaa, bound to gdp 0.9445 9 330
2qm7-assembly1.cif.gz_B meab, a bacterial homolog of mmaa, bound to gdp 0.9386 9 330
4jyb-assembly1.cif.gz_B meab, a bacterial homolog of mmaa, bound to gmppnp 0.9307 9 330
4jyc-assembly1.cif.gz_A meab, a bacterial homolog of mmaa, in its apo form 0.9298 9 327
4jyb-assembly1.cif.gz_B meab, a bacterial homolog of mmaa, bound to gmppnp 0.9278 9 330
ID Description Score Start End Superfamily
af_Q8IVH4_70_135_1.20.5.170 Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces; 0.9528 3 51 1.20.5.170
4lc1B02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9506 55 264 3.40.50.300
2p67A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9461 55 264 3.40.50.300
2wwwA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9441 55 264 3.40.50.300
4lc1B02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9411 55 264 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A2G9ZV84-F1-model_v4 Methylmalonyl Co-A mutase-associated GTPase MeaB 0.9752 9 289 GO:0003924
GO:0005525
GO:0005737
AF-A0A1V4JV10-F1-model_v4 Methylmalonic aciduria type A protein, mitochondrial isoform B 0.9724 57 275 GO:0003924
GO:0005525
GO:0005737
AF-A0A2G1XZK1-F1-model_v4 Methylmalonyl Co-A mutase-associated GTPase MeaB 0.9713 12 256 GO:0003924
GO:0005525
GO:0005737
AF-A0A0E4BTB7-F1-model_v4 Arginine/ornithine transport system ATPase 0.9711 34 328 GO:0003924
GO:0005525
GO:0005737
AF-A0A1W1HFV3-F1-model_v4 Membrane ATPase/protein kinase 0.9702 5 328 GO:0003924
GO:0005525
GO:0005737
GO:0016301

Feature Viewer

pLDDT pTM Quality
87.36 0.87 High
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Predicted Structure (AlphaFold2)

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