F313045

General Info

Members Datasets Scaffolds Average Seq Length
204 132 126 454

Family's Representative Sequence

Representative Sequence 3300049571|Ga0501034_0012036|Ga0501034_0012036_3743_5248
Length 501
Sequence MWDNKRCLIAYKWFISHLQVTQISAHLSAVHHARYSNDNLVNFSVIMKKVLFSLLVLPVWVAAQHADDSVMIRRISDEIMRNGKAYELLYQLTKQVGGRLAGSPQFAQAVKWGESSMQKNGADNVFLQQCMVPHWVRGGTDRAVIMEVDGKKTSRQLDVVAIGNSLGSGKVVSAEVLCVADFDELERRKDEVKGKIVYYNAAFNPTNLHPFQSYGQTGVYRWSGASRAAKYGAVGMMMRSLTESTANYPHTGSMQYNDSFPKIPAIAVGARDADEVWALSRHSKFTMGMLTYGYFMPDTIGHNVIGELKGSEHPDQYITIGGHLDSWDVNEGAHDDGAGVVQTIEIMRALKAIGYQPKHTLRFVLFANEENGLRGGTKYAEEAKAKNEKHIFALESDAGGFTPRGFSLGAAPPQVSKVKSWLPLLSPYGAEHISEEGGGADVGPLARAFGIPVGELRPDEQRYFDVHHARNDVFENVNKRELLLGAVNMAALIYLIDKYGL

Samples

Sample ID Description Type Environment
1 2511231000 Chryseobacterium populi CF314 Isolate Rhizosphere
2 2582581278 Chryseobacterium sp. CF365 Isolate Rhizosphere
3 2582581281 Chryseobacterium sp. CF284 Isolate Rhizosphere
4 2582581282 Chryseobacterium sp. CF299 Isolate Rhizosphere
5 2582581873 Chryseobacterium sp. OV259 Isolate Rhizosphere
6 2585428045 Chryseobacterium sp. OV705 Isolate Rhizosphere
7 2585428060 Chryseobacterium sp. OV715 Isolate Rhizosphere
8 2585428061 Chryseobacterium sp. CF356 Isolate Rhizosphere
9 2585428095 Chryseobacterium sp. YR005 Isolate Rhizosphere
10 2585428182 Chryseobacterium sp. YR477 Isolate Rhizosphere
11 2585428183 Chryseobacterium sp. YR485 Isolate Rhizosphere
12 2585428184 Chryseobacterium sp. YR480 Isolate Rhizosphere
13 2585428185 Chryseobacterium sp. YR459 Isolate Rhizosphere
14 2588253712 Chryseobacterium sp. OV279 Isolate Rhizosphere
15 2588254255 Chryseobacterium sp. YR221 Isolate Rhizosphere
16 2588254257 Chryseobacterium sp. YR203 Isolate Rhizosphere
17 2728369107 Chryseobacterium kwangjuense KJ1R5 Isolate Unclassified
18 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
19 2751185877 Chryseobacterium artocarpi UTM-3 Isolate Rhizosphere
20 2765235839 Chryseobacterium indologenes AA5 Isolate Unclassified
21 2772190705 Chryseobacterium contaminans C-26 Isolate Rhizosphere
22 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
23 2816332188 Chryseobacterium aquifrigidense 110 (version 2) Isolate Unclassified
24 2833640130 Mariniflexile sp. TRM1-10 Isolate Rhizosphere
25 2842083920 Chryseobacterium lathyri KCTC 22544 Isolate Rhizosphere
26 2871720351 Chryseobacterium sp. KLBC 52 Isolate Nodule
27 2889290771 Chryseobacterium sp. PvR013 Isolate Rhizosphere
28 2905999023 Chryseobacterium elymi KCTC 22547 Isolate Rhizosphere
29 2919399522 Chryseobacterium sp. 2987 Isolate Unclassified
30 2946019816 Chryseobacterium sp. W4I1 Isolate Rhizosphere
31 2984572630 Chryseobacterium sp. SORGH_AS909 Isolate Aerial Root
32 2984606641 Chryseobacterium sp. SORGH_AS1175 Isolate Aerial Root
33 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
34 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
35 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
36 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
37 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
38 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
39 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
40 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
41 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
42 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
43 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
44 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
45 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
46 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
47 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
48 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
49 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
50 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
51 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
52 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
53 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
55 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
56 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
62 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
65 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
66 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
67 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
68 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
69 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
70 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
71 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
72 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
73 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
74 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
75 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
76 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
91 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
92 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
93 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
94 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
95 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
96 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
97 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
98 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
99 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
100 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
101 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
102 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
103 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
104 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
105 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
106 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
107 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
108 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
109 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
110 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
111 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
112 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
113 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
114 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
115 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
116 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
117 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
118 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
119 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
120 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
121 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
122 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
123 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
124 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
125 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
126 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
128 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
129 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
130 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
131 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
132 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 75
Metatranscriptomes 0
Isolates 25

Biome Distribution

Category Percentage (%)
Aerial Root 0.98
Bulb 0
Endosphere 3.43
Nodule 0.98
Rhizoplane 1.47
Rhizosphere 70.1
Stem 0
Stem Tuber 0
Unclassified 23.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1009041 3300001915 Bacteria 1850
2 rootH2_10309806 3300003320 Bacteria 2544
3 rootL2_10042868 3300003322 Bacteria 6010
4 rootH1_10144385 3300003323 Bacteria 13170
5 Ga0065714_10066148 3300005288 Bacteria 7488
6 Ga0065704_10071279 3300005289 Bacteria 12033
7 Ga0070683_100048558 3300005329 Bacteria 3924
8 Ga0070670_100041142 3300005331 Bacteria 3972
9 Ga0070682_100000453 3300005337 Bacteria 25941
10 Ga0068868_100122692 3300005338 Bacteria 2120
11 Ga0070675_100050113 3300005354 Bacteria 3429
12 Ga0070671_100134357 3300005355 Unclassified 2085
13 Ga0070673_100027908 3300005364 Bacteria 4191
14 Ga0070681_10026184 3300005458 Bacteria 5864
15 Ga0070684_100003131 3300005535 Bacteria 12344
16 Ga0070664_100008003 3300005564 Bacteria 8539
17 Ga0068852_100000999 3300005616 Bacteria 18658
18 Ga0068852_100011047 3300005616 Bacteria 6778
19 Ga0068852_100028797 3300005616 Bacteria 4551
20 Ga0068851_10003573 3300005834 Bacteria 6925
21 Ga0070717_10000003 3300006028 Bacteria 370103
22 Ga0075366_10111567 3300006195 Bacteria 1645
23 Ga0097621_100000118 3300006237 Bacteria 45384
24 Ga0068871_100002078 3300006358 Bacteria 13539
25 Ga0105244_10001728 3300009036 Bacteria 17192
26 Ga0105243_10008867 3300009148 Bacteria 7697
27 Ga0105248_10007403 3300009177 Bacteria 12044
28 Ga0105237_10000918 3300009545 Bacteria 39613
29 Ga0105237_10024902 3300009545 Bacteria 6123
30 Ga0105249_10207742 3300009553 Unclassified 1920
31 Ga0105239_10013426 3300010375 Bacteria 9100
32 Ga0157371_10038631 3300013102 Bacteria 3415
33 Ga0157370_10002784 3300013104 Bacteria 20894
34 Ga0157369_10143279 3300013105 Bacteria 2528
35 Ga0157374_10020583 3300013296 Bacteria 5857
36 Ga0157374_10065746 3300013296 Bacteria 3406
37 Ga0157378_10034736 3300013297 Bacteria 4459
38 Ga0163162_10000086 3300013306 Bacteria 85949
39 Ga0163162_10069249 3300013306 Unclassified 3580
40 Ga0163162_10207880 3300013306 Bacteria 2087
41 Ga0157372_10016952 3300013307 Bacteria 7820
42 Ga0157372_10084835 3300013307 Bacteria 3591
43 Ga0157372_10141829 3300013307 Bacteria 2769
44 Ga0157375_10000115 3300013308 Bacteria 77964
45 Ga0163163_10000244 3300014325 Bacteria 55634
46 Ga0157380_10000004 3300014326 Bacteria 212844
47 Ga0157379_10036298 3300014968 Bacteria 4395
48 Ga0157376_10000429 3300014969 Bacteria 27200
49 Ga0182006_1000011 3300015261 Bacteria 408647
50 Ga0163161_10002640 3300017792 Bacteria 12736
51 Ga0163161_10011537 3300017792 Bacteria 6132
52 Ga0213876_10001099 3300021384 Bacteria 17320
53 Ga0209675_1000056 3300025291 Bacteria 187664
54 Ga0207655_1000953 3300025728 Bacteria 29984
55 Ga0207647_10000088 3300025904 Bacteria 70267
56 Ga0207695_10000361 3300025913 Bacteria 104230
57 Ga0207657_10092501 3300025919 Bacteria 2520
58 Ga0207657_10096381 3300025919 Bacteria 2461
59 Ga0207650_10001228 3300025925 Bacteria 18739
60 Ga0207650_10031317 3300025925 Bacteria 3840
61 Ga0207644_10028784 3300025931 Bacteria 3850
62 Ga0207690_10029834 3300025932 Bacteria 3472
63 Ga0207709_10004311 3300025935 Bacteria 8241
64 Ga0207661_10009477 3300025944 Bacteria 6985
65 Ga0207679_10028235 3300025945 Bacteria 3890
66 Ga0207641_10038937 3300026088 Bacteria 3975
67 Ga0207676_10109223 3300026095 Bacteria 2311
68 Ga0207698_10001607 3300026142 Bacteria 13152
69 Ga0207698_10011832 3300026142 Bacteria 5679
70 Ga0207698_10019973 3300026142 Bacteria 4601
71 Ga0265318_10000055 3300028577 Bacteria 114178
72 Ga0265324_10009171 3300029957 Bacteria 3878
73 Ga0265330_10006443 3300031235 Bacteria 5802
74 Ga0265320_10049390 3300031240 Unclassified 2048
75 Ga0265327_10000032 3300031251 Bacteria 318763
76 Ga0265327_10026399 3300031251 Unclassified 3364
77 Ga0265313_10001637 3300031595 Bacteria 20739
78 Ga0265314_10000587 3300031711 Bacteria 45728
79 Ga0307406_10107681 3300031901 Unclassified 1912
80 Ga0307412_10000012 3300031911 Bacteria 404180
81 Ga0307416_100000033 3300032002 Bacteria 156736
82 Ga0307416_100045561 3300032002 Unclassified 3455
83 Ga0395899_0000064 3300037312 Bacteria 207082
84 Ga0395900_0181555 3300037418 Unclassified 2138
85 Ga0395905_0000023 3300037471 Bacteria 319640
86 Ga0436365_1591745 3300039437 Bacteria 18185
87 Ga0451577_0000076 3300042876 Bacteria 225346
88 Ga0453683_0025965 3300044673 Unclassified 3719
89 Ga0453684_0038616 3300044712 Bacteria 6523
90 Ga0453684_0039561 3300044712 Bacteria 6423
91 Ga0466959_0045702 3300045049 Unclassified 3225
92 Ga0451576_0000015 3300045051 Bacteria 579908
93 Ga0451576_0058655 3300045051 Unclassified 4021
94 Ga0495596_0002969 3300046500 Bacteria 8797
95 Ga0495606_0008166 3300046507 Bacteria 9164
96 Ga0495606_0012506 3300046507 Bacteria 6798
97 Ga0495610_0000001 3300046512 Bacteria 1620061
98 Ga0495609_0000083 3300046538 Bacteria 115045
99 Ga0495686_0000010 3300047472 Bacteria 573229
100 Ga0496102_0026529 3300048905 Bacteria 5169
101 Ga0496113_0233657 3300048916 Bacteria 1466
102 Ga0496114_0046219 3300048917 Bacteria 3618
103 Ga0496116_0000012 3300048919 Bacteria 611365
104 Ga0496117_0000257 3300048920 Bacteria 99879
105 Ga0496118_0000196 3300048921 Bacteria 106933
106 Ga0496119_0000002 3300048922 Bacteria 738385
107 Ga0496122_0000386 3300048925 Bacteria 93777
108 Ga0496122_0000412 3300048925 Bacteria 90921
109 Ga0496122_0002247 3300048925 Bacteria 27999
110 Ga0496122_0002293 3300048925 Bacteria 27643
111 Ga0496122_0004403 3300048925 Bacteria 17526
112 Ga0496123_0001909 3300048926 Bacteria 27192
113 Ga0496123_0002634 3300048926 Bacteria 21748
114 Ga0496123_0017851 3300048926 Bacteria 5682
115 Ga0496124_0000789 3300048927 Bacteria 51772
116 Ga0496125_0004495 3300048928 Bacteria 16048
117 Ga0496125_0005909 3300048928 Bacteria 13417
118 Ga0496126_0000114 3300048929 Bacteria 188605
119 Ga0501034_0012036 3300049571 Bacteria 8943
120 Ga0501034_0079012 3300049571 Unclassified 3293
121 Ga0501080_0110886 3300049742 Unclassified 2543
122 Ga0501044_0136031 3300049823 Bacteria 2449
123 nmdc:mga0k408_35844_c1 3300050493 Unclassified 2845
124 Ga0500554_023184 3300053102 Bacteria 1743
125 Ga0500622_0059662 3300053156 Bacteria 1948
126 Ga0500611_000004 3300053727 Bacteria 253326

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049571 Ga0501034_0079012 Ga0501034_0079012_29_1297 416
2 3300013296 Ga0157374_10020583 Ga0157374_100205833 420
3 3300005616 Ga0068852_100028797 Ga0068852_1000287974 429
4 3300026142 Ga0207698_10019973 Ga0207698_100199734 429
5 3300010375 Ga0105239_10013426 Ga0105239_100134267 431
6 3300003322 rootL2_10042868 rootL2_100428684 434
7 3300005458 Ga0070681_10026184 Ga0070681_100261843 435
8 3300044673 Ga0453683_0025965 Ga0453683_0025965_975_2435 437
9 3300045051 Ga0451576_0058655 Ga0451576_0058655_1231_2691 437
10 3300005331 Ga0070670_100041142 Ga0070670_1000411425 438
11 3300025925 Ga0207650_10031317 Ga0207650_100313172 438
12 3300028577 Ga0265318_10000055 Ga0265318_1000005533 439
13 3300029957 Ga0265324_10009171 Ga0265324_100091713 439
14 3300031235 Ga0265330_10006443 Ga0265330_100064432 443
15 3300021384 Ga0213876_10001099 Ga0213876_100010997 445
16 3300031251 Ga0265327_10026399 Ga0265327_100263992 445
17 3300037471 Ga0395905_0000023 Ga0395905_0000023_56199_57566 445
18 3300039437 Ga0436365_1591745 Ga0436365_1591745_7814_9178 445
19 3300045051 Ga0451576_0000015 Ga0451576_0000015_300344_301714 445
20 3300049823 Ga0501044_0136031 Ga0501044_0136031_466_1839 445
21 3300053156 Ga0500622_0059662 Ga0500622_0059662_504_1871 445
22 3300005354 Ga0070675_100050113 Ga0070675_1000501131 446
23 3300037312 Ga0395899_0000064 Ga0395899_0000064_176175_177551 446
24 3300037418 Ga0395900_0181555 Ga0395900_0181555_292_1668 446
25 3300049571 Ga0501034_0012036 Ga0501034_0012036_3743_5248 446
26 3300049742 Ga0501080_0110886 Ga0501080_0110886_292_1659 446
27 3300053102 Ga0500554_023184 Ga0500554_023184_280_1647 446
28 iso_pu_bacteria 2833640130 2833642977 446
29 3300005338 Ga0068868_100122692 Ga0068868_1001226923 447
30 3300005355 Ga0070671_100134357 Ga0070671_1001343573 447
31 3300005364 Ga0070673_100027908 Ga0070673_1000279082 447
32 3300005535 Ga0070684_100003131 Ga0070684_1000031313 447
33 3300005564 Ga0070664_100008003 Ga0070664_1000080038 447
34 3300005616 Ga0068852_100000999 Ga0068852_1000009993 447
35 3300005616 Ga0068852_100011047 Ga0068852_1000110477 447
36 3300005834 Ga0068851_10003573 Ga0068851_100035737 447
37 3300006195 Ga0075366_10111567 Ga0075366_101115672 447
38 3300013105 Ga0157369_10143279 Ga0157369_101432792 447
39 3300013296 Ga0157374_10065746 Ga0157374_100657463 447
40 3300025904 Ga0207647_10000088 Ga0207647_1000008819 447
41 3300025919 Ga0207657_10092501 Ga0207657_100925012 447
42 3300025925 Ga0207650_10001228 Ga0207650_100012285 447
43 3300025931 Ga0207644_10028784 Ga0207644_100287842 447
44 3300025932 Ga0207690_10029834 Ga0207690_100298342 447
45 3300025945 Ga0207679_10028235 Ga0207679_100282352 447
46 3300026142 Ga0207698_10001607 Ga0207698_100016073 447
47 3300026142 Ga0207698_10011832 Ga0207698_100118325 447
48 3300031240 Ga0265320_10049390 Ga0265320_100493902 447
49 3300031595 Ga0265313_10001637 Ga0265313_100016373 447
50 3300031711 Ga0265314_10000587 Ga0265314_1000058734 447
51 3300031901 Ga0307406_10107681 Ga0307406_101076811 447
52 3300032002 Ga0307416_100045561 Ga0307416_1000455612 447
53 3300042876 Ga0451577_0000076 Ga0451577_0000076_129849_131240 447
54 3300044712 Ga0453684_0039561 Ga0453684_0039561_820_2271 447
55 3300045049 Ga0466959_0045702 Ga0466959_0045702_692_2095 447
56 3300047472 Ga0495686_0000010 Ga0495686_0000010_77504_78958 447
57 3300050493 nmdc:mga0k408_35844_c1 nmdc:mga0k408_35844_c1_1182_2558 447
58 3300053727 Ga0500611_000004 Ga0500611_000004_181368_182741 447
59 iso_pu_bacteria 2786546940 2788435356 447
60 3300009545 Ga0105237_10000918 Ga0105237_1000091823 448
61 3300009545 Ga0105237_10024902 Ga0105237_100249024 448
62 3300013306 Ga0163162_10069249 Ga0163162_100692493 448
63 3300013307 Ga0157372_10016952 Ga0157372_100169527 448
64 3300013307 Ga0157372_10084835 Ga0157372_100848352 448
65 3300013307 Ga0157372_10141829 Ga0157372_101418292 448
66 3300014326 Ga0157380_10000004 Ga0157380_1000000455 448
67 3300017792 Ga0163161_10011537 Ga0163161_100115373 448
68 3300025913 Ga0207695_10000361 Ga0207695_100003617 448
69 3300031251 Ga0265327_10000032 Ga0265327_100000325 448
70 iso_pu_bacteria 2511231000 2511234296 448
71 iso_pu_bacteria 2582581278 2585142638 448
72 iso_pu_bacteria 2582581278 2585142639 448
73 iso_pu_bacteria 2582581281 2585159438 448
74 iso_pu_bacteria 2582581282 2585163693 448
75 iso_pu_bacteria 2582581873 2585424872 448
76 iso_pu_bacteria 2585428045 2587678439 448
77 iso_pu_bacteria 2585428045 2587678440 448
78 iso_pu_bacteria 2585428060 2587748077 448
79 iso_pu_bacteria 2585428060 2587748078 448
80 iso_pu_bacteria 2585428061 2587752574 448
81 iso_pu_bacteria 2585428095 2587866627 448
82 iso_pu_bacteria 2585428182 2588208544 448
83 iso_pu_bacteria 2585428182 2588208545 448
84 iso_pu_bacteria 2585428183 2588212960 448
85 iso_pu_bacteria 2585428183 2588212961 448
86 iso_pu_bacteria 2585428184 2588219550 448
87 iso_pu_bacteria 2585428184 2588219551 448
88 iso_pu_bacteria 2585428185 2588224138 448
89 iso_pu_bacteria 2585428185 2588224139 448
90 iso_pu_bacteria 2588253712 2588446234 448
91 iso_pu_bacteria 2588253712 2588446235 448
92 iso_pu_bacteria 2588254255 2590600525 448
93 iso_pu_bacteria 2588254257 2590611727 448
94 iso_pu_bacteria 2588254257 2590611728 448
95 iso_pu_bacteria 2728369107 2729201706 448
96 iso_pu_bacteria 2739367874 2740057416 448
97 iso_pu_bacteria 2739367874 2740057417 448
98 iso_pu_bacteria 2751185877 2753672897 448
99 iso_pu_bacteria 2751185877 2753672898 448
100 iso_pu_bacteria 2765235839 2765572332 448
101 iso_pu_bacteria 2765235839 2765572333 448
102 iso_pu_bacteria 2772190705 2772603570 448
103 iso_pu_bacteria 2772190705 2772603571 448
104 iso_pu_bacteria 2816332188 2816872611 448
105 iso_pu_bacteria 2816332188 2816872612 448
106 iso_pu_bacteria 2842083920 2842084011 448
107 iso_pu_bacteria 2842083920 2842084012 448
108 iso_pu_bacteria 2871720351 2871721855 448
109 iso_pu_bacteria 2871720351 2871721856 448
110 iso_pu_bacteria 2889290771 2889292032 448
111 iso_pu_bacteria 2889290771 2889292033 448
112 iso_pu_bacteria 2905999023 2906000981 448
113 iso_pu_bacteria 2905999023 2906000982 448
114 iso_pu_bacteria 2919399522 2919402717 448
115 iso_pu_bacteria 2946019816 2946021207 448
116 iso_pu_bacteria 2946019816 2946021208 448
117 iso_pu_bacteria 2984572630 2984575763 448
118 iso_pu_bacteria 2984606641 2984609218 448
119 3300006028 Ga0070717_10000003 Ga0070717_1000000385 449
120 3300006237 Ga0097621_100000118 Ga0097621_10000011838 449
121 3300006358 Ga0068871_100002078 Ga0068871_1000020787 449
122 3300009177 Ga0105248_10007403 Ga0105248_1000740311 449
123 3300009553 Ga0105249_10207742 Ga0105249_102077422 449
124 3300013297 Ga0157378_10034736 Ga0157378_100347363 449
125 3300013306 Ga0163162_10000086 Ga0163162_1000008634 449
126 3300013306 Ga0163162_10207880 Ga0163162_102078802 449
127 3300013308 Ga0157375_10000115 Ga0157375_1000011544 449
128 3300014325 Ga0163163_10000244 Ga0163163_1000024444 449
129 3300014968 Ga0157379_10036298 Ga0157379_100362984 449
130 3300014969 Ga0157376_10000429 Ga0157376_1000042924 449
131 3300026088 Ga0207641_10038937 Ga0207641_100389372 449
132 3300026095 Ga0207676_10109223 Ga0207676_101092233 449
133 3300048917 Ga0496114_0046219 Ga0496114_0046219_188_1561 449
134 3300013102 Ga0157371_10038631 Ga0157371_100386313 450
135 3300044712 Ga0453684_0038616 Ga0453684_0038616_2000_3409 450
136 3300001915 JGI24741J21665_1009041 JGI24741J21665_10090411 452
137 3300003320 rootH2_10309806 rootH2_103098062 452
138 3300003323 rootH1_10144385 rootH1_101443858 452
139 3300003323 rootH1_10144385 rootH1_101443859 452
140 3300005288 Ga0065714_10066148 Ga0065714_100661481 452
141 3300005289 Ga0065704_10071279 Ga0065704_100712798 452
142 3300005329 Ga0070683_100048558 Ga0070683_1000485583 452
143 3300005337 Ga0070682_100000453 Ga0070682_10000045320 452
144 3300005337 Ga0070682_100000453 Ga0070682_10000045321 452
145 3300009036 Ga0105244_10001728 Ga0105244_1000172810 452
146 3300009036 Ga0105244_10001728 Ga0105244_100017289 452
147 3300009148 Ga0105243_10008867 Ga0105243_100088674 452
148 3300009148 Ga0105243_10008867 Ga0105243_100088675 452
149 3300013104 Ga0157370_10002784 Ga0157370_1000278413 452
150 3300013104 Ga0157370_10002784 Ga0157370_1000278414 452
151 3300015261 Ga0182006_1000011 Ga0182006_100001171 452
152 3300017792 Ga0163161_10002640 Ga0163161_100026408 452
153 3300025291 Ga0209675_1000056 Ga0209675_1000056173 452
154 3300025291 Ga0209675_1000056 Ga0209675_1000056174 452
155 3300025728 Ga0207655_1000953 Ga0207655_100095310 452
156 3300025728 Ga0207655_1000953 Ga0207655_10009539 452
157 3300025919 Ga0207657_10096381 Ga0207657_100963811 452
158 3300025935 Ga0207709_10004311 Ga0207709_100043114 452
159 3300025935 Ga0207709_10004311 Ga0207709_100043115 452
160 3300025944 Ga0207661_10009477 Ga0207661_100094773 452
161 3300031911 Ga0307412_10000012 Ga0307412_10000012384 452
162 3300032002 Ga0307416_100000033 Ga0307416_100000033114 452
163 3300046500 Ga0495596_0002969 Ga0495596_0002969_2035_3393 452
164 3300046500 Ga0495596_0002969 Ga0495596_0002969_674_2032 452
165 3300046507 Ga0495606_0008166 Ga0495606_0008166_560_1918 452
166 3300046507 Ga0495606_0012506 Ga0495606_0012506_1132_2490 452
167 3300046507 Ga0495606_0012506 Ga0495606_0012506_2493_3851 452
168 3300046512 Ga0495610_0000001 Ga0495610_0000001_1267785_1269143 452
169 3300046512 Ga0495610_0000001 Ga0495610_0000001_1269147_1270505 452
170 3300046538 Ga0495609_0000083 Ga0495609_0000083_32146_33504 452
171 3300048905 Ga0496102_0026529 Ga0496102_0026529_1291_2649 452
172 3300048916 Ga0496113_0233657 Ga0496113_0233657_86_1444 452
173 3300048919 Ga0496116_0000012 Ga0496116_0000012_129556_130914 452
174 3300048919 Ga0496116_0000012 Ga0496116_0000012_130918_132276 452
175 3300048920 Ga0496117_0000257 Ga0496117_0000257_87873_89231 452
176 3300048920 Ga0496117_0000257 Ga0496117_0000257_89235_90593 452
177 3300048921 Ga0496118_0000196 Ga0496118_0000196_85711_87069 452
178 3300048921 Ga0496118_0000196 Ga0496118_0000196_87073_88431 452
179 3300048922 Ga0496119_0000002 Ga0496119_0000002_304296_305654 452
180 3300048922 Ga0496119_0000002 Ga0496119_0000002_305658_307016 452
181 3300048925 Ga0496122_0000386 Ga0496122_0000386_4963_6321 452
182 3300048925 Ga0496122_0000386 Ga0496122_0000386_6324_7685 452
183 3300048925 Ga0496122_0000412 Ga0496122_0000412_72274_73635 452
184 3300048925 Ga0496122_0000412 Ga0496122_0000412_73638_74996 452
185 3300048925 Ga0496122_0002247 Ga0496122_0002247_16304_17662 452
186 3300048925 Ga0496122_0002247 Ga0496122_0002247_17666_19024 452
187 3300048925 Ga0496122_0002293 Ga0496122_0002293_5057_6415 452
188 3300048925 Ga0496122_0002293 Ga0496122_0002293_6419_7777 452
189 3300048925 Ga0496122_0004403 Ga0496122_0004403_10503_11861 452
190 3300048925 Ga0496122_0004403 Ga0496122_0004403_9141_10499 452
191 3300048926 Ga0496123_0001909 Ga0496123_0001909_23352_24710 452
192 3300048926 Ga0496123_0001909 Ga0496123_0001909_24714_26072 452
193 3300048926 Ga0496123_0002634 Ga0496123_0002634_5118_6476 452
194 3300048926 Ga0496123_0002634 Ga0496123_0002634_6480_7838 452
195 3300048926 Ga0496123_0017851 Ga0496123_0017851_1456_2814 452
196 3300048926 Ga0496123_0017851 Ga0496123_0017851_2817_4178 452
197 3300048927 Ga0496124_0000789 Ga0496124_0000789_11248_12606 452
198 3300048927 Ga0496124_0000789 Ga0496124_0000789_12610_13968 452
199 3300048928 Ga0496125_0004495 Ga0496125_0004495_2020_3378 452
200 3300048928 Ga0496125_0004495 Ga0496125_0004495_658_2016 452
201 3300048928 Ga0496125_0005909 Ga0496125_0005909_10270_11628 452
202 3300048928 Ga0496125_0005909 Ga0496125_0005909_8908_10266 452
203 3300048929 Ga0496126_0000114 Ga0496126_0000114_172510_173868 452
204 3300048929 Ga0496126_0000114 Ga0496126_0000114_173871_175229 452

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04389

Peptidase_M28

Peptidase family M28

303

493

0.89

PF01546

Peptidase_M20

Peptidase family M20/M25/M40

331

467

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
3iib-assembly1.cif.gz_A-2 crystal structure of peptidase m28 precursor (yp_926796.1) from shewanella amazonensis sb2b at 1.70 a resolution 0.9495 20 449
3iib-assembly1.cif.gz_A-2 crystal structure of peptidase m28 precursor (yp_926796.1) from shewanella amazonensis sb2b at 1.70 a resolution 0.9204 20 449
6ica-assembly2.cif.gz_B the crystal structure of legionella pneumophila lapa aminopeptidase 0.8224 255 449
6esl-assembly1.cif.gz_A crystal structure of the legionella pneumoppila lapa 0.8181 256 450
3b7i-assembly1.cif.gz_A crystal structure of the s228a mutant of the aminopeptidase from vibrio proteolyticus in complex with leucine phosphonic acid 0.8136 255 450
ID Description Score Start End Superfamily
af_Q54MN6_157_296_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.936 94 246 3.40.630.10
af_Q9Y646_117_259_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9335 94 246 3.40.630.10
3iibA01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9332 20 452 3.40.630.10
af_Q54MN6_157_296_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9296 94 246 3.40.630.10
af_Q9Y646_117_259_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9273 94 246 3.40.630.10
ID Description Score Start End GO Terms
AF-A0A381FFA3-F1-model_v4 Carboxypeptidase Q (Plasma glutamate carboxypeptidase) 0.9933 273 452 GO:0004177
GO:0004180
GO:0005576
GO:0005764
GO:0070573
AF-A0A136N8C9-F1-model_v4 Carboxypeptidase Q (Plasma glutamate carboxypeptidase) 0.9905 48 451 GO:0004180
GO:0005576
GO:0005764
GO:0070573
AF-A0A381FFA3-F1-model_v4 Carboxypeptidase Q (Plasma glutamate carboxypeptidase) 0.9879 273 452 GO:0004177
GO:0004180
GO:0005576
GO:0005764
GO:0070573
AF-A0A3C0IMW9-F1-model_v4 Carboxypeptidase Q (Plasma glutamate carboxypeptidase) 0.9868 255 450 GO:0004180
GO:0005576
GO:0005764
GO:0070573
AF-A0A2W6S239-F1-model_v4 Carboxypeptidase Q (Plasma glutamate carboxypeptidase) 0.9862 1 346 GO:0004180
GO:0005576
GO:0005764
GO:0070573

Feature Viewer

pLDDT pTM Quality
94.1 0.91 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar

Map