F312689

General Info

Members Datasets Scaffolds Average Seq Length
204 140 201 420

Family's Representative Sequence

Representative Sequence 3300031507|Ga0307509_10038715|Ga0307509_100387151
Length 452
Sequence MAHSPGSPSPTPHLARTLGPLMLWGLGVGYVISGMYFGWNLGLAEGGTLGLAIATGFIIILYITFTFSYTELAAAIPKAGGVFDYATRGLNKELGFIAGTAQIIEFVFAPPAIAAAIGAYFHIFFPQLSVTTIAIGAYVLFTALNMYGVKAAAVFELVITVLAVVELLIFAGITLPHFETKHLQQNAFPHGWIGVWASVPFAIWFFLGLEGVANVAEETVRPQRNILLGFGTALLTLIVLCVLVFISSVGVAGWEAIVYPAPGADPSDSPLPLALSKITGNSGWMYHLLITIGLMGLVASFHGIILAAGRATFEFGRVGYIPRTFGKIHARFKTPVSALLVNMVAGIIALLTGKTGDIITIAVFGALSLYIISMVTVLALRKKEPDLERPFRVPFYPAFPIIALMIASVSLVAMITLNIKLSIIYFSILALAYIWFHFFVKKSDDAKQTIPS

Samples

Sample ID Description Type Environment
1 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
2 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
3 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
56 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
81 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
82 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
83 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
84 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
85 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
86 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
87 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
88 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
89 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
90 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
91 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
92 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
93 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
94 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
95 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
96 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
97 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
98 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
99 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
100 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
101 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
102 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
103 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
104 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
105 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
106 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
107 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
108 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
109 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
110 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
111 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
112 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
113 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
114 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
124 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
125 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
126 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
127 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
128 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
129 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
130 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
131 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
132 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
133 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
135 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
136 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
137 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
138 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
139 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
140 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.53
Metatranscriptomes 0
Isolates 1.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.96
Nodule 0
Rhizoplane 0.49
Rhizosphere 88.73
Stem 0
Stem Tuber 0
Unclassified 8.82

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10067227 3300003316 Bacteria 7865
2 rootH2_10001545 3300003320 Bacteria 30757
3 rootH2_10049397 3300003320 Bacteria 14259
4 Ga0070658_10049912 3300005327 Bacteria 3391
5 Ga0070683_100006446 3300005329 Bacteria 9846
6 Ga0070670_100070455 3300005331 Bacteria 3001
7 Ga0070670_100092685 3300005331 Bacteria 2598
8 Ga0070666_10001486 3300005335 Bacteria 14247
9 Ga0070666_10015507 3300005335 Unclassified 4862
10 Ga0070689_100057342 3300005340 Bacteria 3023
11 Ga0070674_100033122 3300005356 Bacteria 3437
12 Ga0070667_100084515 3300005367 Bacteria 2720
13 Ga0070667_100141506 3300005367 Unclassified 2107
14 Ga0070681_10045359 3300005458 Bacteria 4398
15 Ga0070681_10161334 3300005458 Bacteria 2166
16 Ga0070706_100075534 3300005467 Bacteria 3118
17 Ga0070698_100015035 3300005471 Bacteria 8182
18 Ga0070698_100090351 3300005471 Bacteria 3046
19 Ga0070679_100024352 3300005530 Bacteria 5931
20 Ga0070684_100008722 3300005535 Bacteria 7949
21 Ga0068853_100016623 3300005539 Bacteria 6058
22 Ga0070665_100000001 3300005548 Bacteria 1083363
23 Ga0068855_100002785 3300005563 Bacteria 21517
24 Ga0068855_100093860 3300005563 Bacteria 3460
25 Ga0068857_100045654 3300005577 Bacteria 3888
26 Ga0068854_100069851 3300005578 Bacteria 2566
27 Ga0068856_100184970 3300005614 Bacteria 2097
28 Ga0068852_100002881 3300005616 Bacteria 11934
29 Ga0068852_100006263 3300005616 Bacteria 8585
30 Ga0068859_100000041 3300005617 Bacteria 162415
31 Ga0068859_100039603 3300005617 Bacteria 4728
32 Ga0068859_100324548 3300005617 Bacteria 1633
33 Ga0068864_100010289 3300005618 Bacteria 7724
34 Ga0068864_100100022 3300005618 Bacteria 2570
35 Ga0068861_100167012 3300005719 Unclassified 1820
36 Ga0068863_100005723 3300005841 Bacteria 12197
37 Ga0068863_100045452 3300005841 Bacteria 4167
38 Ga0068863_100070702 3300005841 Bacteria 3301
39 Ga0068858_100015608 3300005842 Bacteria 7144
40 Ga0068858_100318397 3300005842 Bacteria 1486
41 Ga0068860_100000004 3300005843 Bacteria 506126
42 Ga0068860_100006576 3300005843 Bacteria 11671
43 Ga0068860_100014912 3300005843 Bacteria 7599
44 Ga0068862_100026282 3300005844 Bacteria 4893
45 Ga0081539_10017642 3300005985 Unclassified 4999
46 Ga0097621_100037556 3300006237 Bacteria 3883
47 Ga0097621_100051978 3300006237 Bacteria 3336
48 Ga0068871_100003567 3300006358 Bacteria 10703
49 Ga0075431_100126359 3300006847 Bacteria 2638
50 Ga0068865_100123790 3300006881 Bacteria 1927
51 Ga0097620_100000041 3300006931 Bacteria 162415
52 Ga0097620_100039604 3300006931 Bacteria 4728
53 Ga0097620_100324554 3300006931 Bacteria 1633
54 Ga0105240_10000306 3300009093 Bacteria 94696
55 Ga0105240_10004135 3300009093 Bacteria 22246
56 Ga0105240_10004279 3300009093 Bacteria 21805
57 Ga0105240_10031868 3300009093 Bacteria 6830
58 Ga0105240_10037174 3300009093 Bacteria 6258
59 Ga0105240_10144112 3300009093 Unclassified 2844
60 Ga0105247_10010463 3300009101 Bacteria 5610
61 Ga0114129_10101310 3300009147 Unclassified 3985
62 Ga0105241_10001094 3300009174 Bacteria 20630
63 Ga0105241_10018488 3300009174 Bacteria 5127
64 Ga0105242_10042135 3300009176 Bacteria 3685
65 Ga0105242_10067317 3300009176 Bacteria 2961
66 Ga0105237_10000437 3300009545 Bacteria 59394
67 Ga0105237_10003782 3300009545 Bacteria 17797
68 Ga0105237_10021191 3300009545 Bacteria 6685
69 Ga0105237_10025016 3300009545 Bacteria 6108
70 Ga0105249_10002496 3300009553 Bacteria 15928
71 Ga0105239_10004848 3300010375 Bacteria 15917
72 Ga0105239_10014245 3300010375 Bacteria 8827
73 Ga0105239_10024918 3300010375 Bacteria 6589
74 Ga0157371_10021714 3300013102 Bacteria 4710
75 Ga0157370_10031142 3300013104 Bacteria 5221
76 Ga0157370_10072566 3300013104 Bacteria 3247
77 Ga0157369_10116236 3300013105 Bacteria 2840
78 Ga0157374_10000001 3300013296 Bacteria 1077351
79 Ga0157378_10001597 3300013297 Bacteria 20503
80 Ga0157378_10009738 3300013297 Bacteria 8372
81 Ga0157378_10096391 3300013297 Unclassified 2695
82 Ga0157378_10133064 3300013297 Bacteria 2304
83 Ga0163162_10000374 3300013306 Bacteria 40673
84 Ga0163162_10007767 3300013306 Bacteria 10452
85 Ga0163162_10061815 3300013306 Bacteria 3784
86 Ga0163162_10126023 3300013306 Bacteria 2667
87 Ga0157372_10008093 3300013307 Bacteria 11182
88 Ga0157372_10079483 3300013307 Unclassified 3709
89 Ga0157372_10130607 3300013307 Bacteria 2890
90 Ga0157375_10025700 3300013308 Bacteria 5478
91 Ga0163163_10110933 3300014325 Bacteria 2772
92 Ga0163163_10158727 3300014325 Bacteria 2307
93 Ga0163163_10334299 3300014325 Unclassified 1570
94 Ga0157376_10003152 3300014969 Bacteria 11325
95 Ga0207680_10000151 3300025903 Bacteria 33591
96 Ga0207643_10062352 3300025908 Bacteria 2131
97 Ga0207705_10136627 3300025909 Unclassified 1828
98 Ga0207654_10001437 3300025911 Bacteria 12626
99 Ga0207707_10231686 3300025912 Unclassified 1607
100 Ga0207695_10000057 3300025913 Bacteria 376090
101 Ga0207695_10000071 3300025913 Bacteria 315568
102 Ga0207695_10000266 3300025913 Bacteria 132163
103 Ga0207695_10000810 3300025913 Bacteria 58183
104 Ga0207671_10001323 3300025914 Bacteria 29014
105 Ga0207671_10010425 3300025914 Bacteria 7667
106 Ga0207671_10023299 3300025914 Bacteria 4670
107 Ga0207671_10024853 3300025914 Bacteria 4501
108 Ga0207671_10036454 3300025914 Bacteria 3648
109 Ga0207652_10010738 3300025921 Bacteria 7373
110 Ga0207706_10040281 3300025933 Bacteria 4140
111 Ga0207689_10005245 3300025942 Bacteria 11627
112 Ga0207661_10012109 3300025944 Bacteria 6266
113 Ga0207667_10000246 3300025949 Bacteria 76379
114 Ga0207667_10002800 3300025949 Bacteria 21597
115 Ga0207712_10018576 3300025961 Bacteria 4531
116 Ga0207640_10027620 3300025981 Bacteria 3460
117 Ga0207658_10171341 3300025986 Bacteria 1788
118 Ga0207677_10022502 3300026023 Bacteria 3876
119 Ga0207703_10002229 3300026035 Bacteria 16981
120 Ga0207641_10000369 3300026088 Bacteria 53464
121 Ga0207641_10058077 3300026088 Bacteria 3292
122 Ga0207641_10241069 3300026088 Bacteria 1685
123 Ga0207676_10014969 3300026095 Bacteria 5589
124 Ga0207676_10071840 3300026095 Unclassified 2780
125 Ga0207674_10003770 3300026116 Bacteria 18486
126 Ga0207698_10018693 3300026142 Bacteria 4729
127 Ga0207698_10137633 3300026142 Bacteria 2098
128 Ga0268266_10000065 3300028379 Bacteria 246498
129 Ga0268265_10110809 3300028380 Bacteria 2240
130 Ga0268264_10000011 3300028381 Bacteria 580884
131 Ga0268264_10003904 3300028381 Bacteria 12766
132 Ga0268264_10014138 3300028381 Bacteria 6562
133 Ga0307517_10005403 3300028786 Bacteria 19280
134 Ga0307515_10000677 3300028794 Bacteria 78511
135 Ga0307511_10001707 3300030521 Bacteria 23119
136 Ga0265332_10010889 3300031238 Bacteria 4041
137 Ga0307509_10038715 3300031507 Bacteria 5200
138 Ga0307509_10149305 3300031507 Unclassified 2257
139 Ga0307508_10003175 3300031616 Bacteria 16802
140 Ga0265314_10040008 3300031711 Bacteria 3370
141 Ga0265342_10057459 3300031712 Bacteria 2303
142 Ga0307516_10001323 3300031730 Bacteria 34352
143 Ga0307516_10163121 3300031730 Bacteria 1977
144 Ga0307414_10094284 3300032004 Unclassified 2234
145 Ga0307510_10009113 3300033180 Bacteria 11816
146 Ga0373950_0000016 3300034818 Bacteria 277879
147 Ga0373936_0000007 3300035113 Bacteria 290641
148 Ga0400483_127475 3300039062 Bacteria 1624
149 Ga0450898_006932 3300042134 Bacteria 1753
150 Ga0439446_0028801 3300042156 Unclassified 1601
151 Ga0451577_0239213 3300042876 Unclassified 1643
152 Ga0466972_0007320 3300044658 Bacteria 5541
153 Ga0466961_0084732 3300044693 Bacteria 2004
154 Ga0453684_0006234 3300044712 Bacteria 22857
155 Ga0466970_0033427 3300044765 Bacteria 2719
156 Ga0466959_0004034 3300045049 Bacteria 9762
157 Ga0495643_0024523 3300046522 Bacteria 3420
158 Ga0495648_0002065 3300046524 Bacteria 19004
159 Ga0495611_0000021 3300046648 Bacteria 123657
160 Ga0495672_0006515 3300047320 Bacteria 9013
161 Ga0495687_000001 3300047443 Bacteria 1215582
162 Ga0495686_0000094 3300047472 Bacteria 187720
163 Ga0496114_0157111 3300048917 Bacteria 1975
164 Ga0496116_0013219 3300048919 Bacteria 6675
165 Ga0496117_0000289 3300048920 Bacteria 90202
166 Ga0496118_0035587 3300048921 Bacteria 4040
167 Ga0496123_0009224 3300048926 Bacteria 8920
168 Ga0495682_0039111 3300049460 Bacteria 1742
169 Ga0501032_0011370 3300049569 Bacteria 6393
170 Ga0501033_0029158 3300049570 Bacteria 4147
171 Ga0501034_0000063 3300049571 Bacteria 190847
172 Ga0501036_0011414 3300049572 Bacteria 7354
173 Ga0501036_0038263 3300049572 Bacteria 4060
174 Ga0501036_0059716 3300049572 Bacteria 3231
175 Ga0501037_0001231 3300049573 Bacteria 18888
176 Ga0501038_0006541 3300049574 Bacteria 10781
177 Ga0501043_0000813 3300049579 Bacteria 27753
178 Ga0501043_0011000 3300049579 Bacteria 7087
179 Ga0501046_0000661 3300049580 Bacteria 33427
180 Ga0501047_0000060 3300049581 Bacteria 137972
181 Ga0501047_0002532 3300049581 Bacteria 17427
182 Ga0501067_0000064 3300049583 Bacteria 60217
183 Ga0501068_0028416 3300049584 Bacteria 3307
184 Ga0501069_0057206 3300049585 Bacteria 2173
185 Ga0501070_0000845 3300049586 Bacteria 27799
186 Ga0501072_0002367 3300049588 Bacteria 14143
187 Ga0501073_0002189 3300049589 Bacteria 14614
188 Ga0501073_0011997 3300049589 Bacteria 6327
189 Ga0501074_0002786 3300049590 Bacteria 12230
190 Ga0501079_0000046 3300049741 Bacteria 52282
191 Ga0501080_0022976 3300049742 Bacteria 5782
192 Ga0501083_0001517 3300049744 Bacteria 15868
193 Ga0501035_0012077 3300049822 Bacteria 7987
194 Ga0501044_0001944 3300049823 Bacteria 23909
195 nmdc:mga06r32_123156_c1 3300050510 Bacteria 2559
196 Ga0500583_0000670 3300053092 Bacteria 10086
197 Ga0500616_0011047 3300053153 Bacteria 5370
198 Ga0500616_0075726 3300053153 Bacteria 1703
199 Ga0500627_0055831 3300053158 Bacteria 1730
200 Ga0501084_0000030 3300054114 Bacteria 119336
201 Ga0501082_0000843 3300060353 Bacteria 27036

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300042876 Ga0451577_0239213 Ga0451577_0239213_14_1141 339
2 3300009093 Ga0105240_10004135 Ga0105240_100041357 352
3 3300005329 Ga0070683_100006446 Ga0070683_1000064466 356
4 3300005535 Ga0070684_100008722 Ga0070684_1000087223 356
5 3300005563 Ga0068855_100002785 Ga0068855_1000027858 356
6 3300025913 Ga0207695_10000071 Ga0207695_1000007110 356
7 3300025949 Ga0207667_10000246 Ga0207667_100002463 356
8 3300013308 Ga0157375_10025700 Ga0157375_100257007 357
9 3300005719 Ga0068861_100167012 Ga0068861_1001670122 360
10 3300025908 Ga0207643_10062352 Ga0207643_100623522 360
11 3300010375 Ga0105239_10004848 Ga0105239_100048483 365
12 3300013306 Ga0163162_10061815 Ga0163162_100618152 365
13 3300025913 Ga0207695_10000266 Ga0207695_1000026676 366
14 3300009147 Ga0114129_10101310 Ga0114129_101013103 367
15 3300026142 Ga0207698_10137633 Ga0207698_101376332 367
16 3300005356 Ga0070674_100033122 Ga0070674_1000331223 368
17 3300013104 Ga0157370_10031142 Ga0157370_100311422 368
18 3300013307 Ga0157372_10079483 Ga0157372_100794832 368
19 3300050510 nmdc:mga06r32_123156_c1 nmdc:mga06r32_123156_c1_1251_2516 368
20 3300005331 Ga0070670_100092685 Ga0070670_1000926852 371
21 3300005539 Ga0068853_100016623 Ga0068853_1000166232 371
22 3300025944 Ga0207661_10012109 Ga0207661_100121092 372
23 3300005844 Ga0068862_100026282 Ga0068862_1000262822 375
24 3300010375 Ga0105239_10024918 Ga0105239_100249182 375
25 3300025933 Ga0207706_10040281 Ga0207706_100402815 375
26 3300028380 Ga0268265_10110809 Ga0268265_101108092 375
27 3300047320 Ga0495672_0006515 Ga0495672_0006515_5830_7155 375
28 3300003320 rootH2_10049397 rootH2_100493973 376
29 3300005985 Ga0081539_10017642 Ga0081539_100176424 376
30 3300006847 Ga0075431_100126359 Ga0075431_1001263591 379
31 3300033180 Ga0307510_10009113 Ga0307510_100091132 379
32 3300044658 Ga0466972_0007320 Ga0466972_0007320_1624_2919 381
33 3300009093 Ga0105240_10004279 Ga0105240_100042798 382
34 3300030521 Ga0307511_10001707 Ga0307511_100017074 382
35 3300042134 Ga0450898_006932 Ga0450898_006932_71_1420 383
36 3300042156 Ga0439446_0028801 Ga0439446_0028801_193_1542 383
37 3300044693 Ga0466961_0084732 Ga0466961_0084732_495_1754 383
38 3300044765 Ga0466970_0033427 Ga0466970_0033427_561_1820 383
39 3300045049 Ga0466959_0004034 Ga0466959_0004034_7717_8976 383
40 3300005467 Ga0070706_100075534 Ga0070706_1000755341 384
41 3300005618 Ga0068864_100100022 Ga0068864_1001000223 384
42 3300026095 Ga0207676_10071840 Ga0207676_100718403 384
43 3300005471 Ga0070698_100090351 Ga0070698_1000903513 385
44 3300005841 Ga0068863_100045452 Ga0068863_1000454524 385
45 3300013297 Ga0157378_10096391 Ga0157378_100963912 385
46 3300014969 Ga0157376_10003152 Ga0157376_100031522 386
47 3300048919 Ga0496116_0013219 Ga0496116_0013219_20_1342 386
48 3300048920 Ga0496117_0000289 Ga0496117_0000289_18604_19926 386
49 3300048921 Ga0496118_0035587 Ga0496118_0035587_337_1659 386
50 3300048926 Ga0496123_0009224 Ga0496123_0009224_644_1966 386
51 3300005340 Ga0070689_100057342 Ga0070689_1000573424 387
52 3300005617 Ga0068859_100324548 Ga0068859_1003245481 387
53 3300006931 Ga0097620_100324554 Ga0097620_1003245541 387
54 3300009176 Ga0105242_10067317 Ga0105242_100673173 387
55 3300014325 Ga0163163_10334299 Ga0163163_103342991 387
56 3300049571 Ga0501034_0000063 Ga0501034_0000063_38690_39967 388
57 3300049572 Ga0501036_0038263 Ga0501036_0038263_784_2061 388
58 3300049579 Ga0501043_0000813 Ga0501043_0000813_9390_10667 388
59 3300049580 Ga0501046_0000661 Ga0501046_0000661_9381_10658 388
60 3300049581 Ga0501047_0000060 Ga0501047_0000060_126644_127921 388
61 3300049584 Ga0501068_0028416 Ga0501068_0028416_1770_3047 388
62 3300049586 Ga0501070_0000845 Ga0501070_0000845_25561_26838 388
63 3300049588 Ga0501072_0002367 Ga0501072_0002367_9856_11133 388
64 3300049589 Ga0501073_0002189 Ga0501073_0002189_6779_8056 388
65 3300049590 Ga0501074_0002786 Ga0501074_0002786_4501_5778 388
66 3300049741 Ga0501079_0000046 Ga0501079_0000046_40081_41358 388
67 3300049742 Ga0501080_0022976 Ga0501080_0022976_2863_4140 388
68 3300049744 Ga0501083_0001517 Ga0501083_0001517_8161_9438 388
69 3300054114 Ga0501084_0000030 Ga0501084_0000030_10050_11327 388
70 3300060353 Ga0501082_0000843 Ga0501082_0000843_24117_25394 388
71 3300005614 Ga0068856_100184970 Ga0068856_1001849702 389
72 3300026088 Ga0207641_10241069 Ga0207641_102410692 389
73 3300049460 Ga0495682_0039111 Ga0495682_0039111_357_1652 389
74 3300049585 Ga0501069_0057206 Ga0501069_0057206_448_1767 389
75 3300005843 Ga0068860_100006576 Ga0068860_1000065764 390
76 3300009093 Ga0105240_10031868 Ga0105240_100318682 390
77 3300009545 Ga0105237_10003782 Ga0105237_100037822 390
78 3300025914 Ga0207671_10036454 Ga0207671_100364542 390
79 3300028381 Ga0268264_10003904 Ga0268264_100039048 390
80 3300053153 Ga0500616_0011047 Ga0500616_0011047_1708_2988 391
81 3300039062 Ga0400483_127475 Ga0400483_127475_151_1470 395
82 3300047472 Ga0495686_0000094 Ga0495686_0000094_57175_58470 395
83 3300005367 Ga0070667_100141506 Ga0070667_1001415062 396
84 3300009545 Ga0105237_10000437 Ga0105237_1000043714 396
85 3300025913 Ga0207695_10000057 Ga0207695_1000005780 396
86 3300025914 Ga0207671_10001323 Ga0207671_1000132314 396
87 3300031507 Ga0307509_10149305 Ga0307509_101493052 396
88 3300046648 Ga0495611_0000021 Ga0495611_0000021_14513_15808 396
89 3300005331 Ga0070670_100070455 Ga0070670_1000704551 397
90 3300005367 Ga0070667_100084515 Ga0070667_1000845152 397
91 3300005458 Ga0070681_10161334 Ga0070681_101613341 397
92 3300005530 Ga0070679_100024352 Ga0070679_1000243525 397
93 3300005616 Ga0068852_100002881 Ga0068852_1000028813 397
94 3300005617 Ga0068859_100039603 Ga0068859_1000396037 397
95 3300005841 Ga0068863_100070702 Ga0068863_1000707022 397
96 3300006931 Ga0097620_100039604 Ga0097620_1000396042 397
97 3300013102 Ga0157371_10021714 Ga0157371_100217142 397
98 3300013297 Ga0157378_10001597 Ga0157378_100015974 397
99 3300013297 Ga0157378_10133064 Ga0157378_101330642 397
100 3300014325 Ga0163163_10158727 Ga0163163_101587272 397
101 3300025912 Ga0207707_10231686 Ga0207707_102316862 397
102 3300025921 Ga0207652_10010738 Ga0207652_100107385 397
103 3300026088 Ga0207641_10058077 Ga0207641_100580772 397
104 3300032004 Ga0307414_10094284 Ga0307414_100942842 397
105 3300049569 Ga0501032_0011370 Ga0501032_0011370_1579_2946 397
106 3300049570 Ga0501033_0029158 Ga0501033_0029158_2315_3682 397
107 3300049572 Ga0501036_0011414 Ga0501036_0011414_327_1694 397
108 3300049573 Ga0501037_0001231 Ga0501037_0001231_7791_9158 397
109 3300049574 Ga0501038_0006541 Ga0501038_0006541_7847_9214 397
110 3300049579 Ga0501043_0011000 Ga0501043_0011000_145_1512 397
111 3300049581 Ga0501047_0002532 Ga0501047_0002532_12062_13429 397
112 3300049822 Ga0501035_0012077 Ga0501035_0012077_2127_3494 397
113 3300049823 Ga0501044_0001944 Ga0501044_0001944_10496_11863 397
114 3300013307 Ga0157372_10130607 Ga0157372_101306072 398
115 3300034818 Ga0373950_0000016 Ga0373950_0000016_55022_56323 398
116 3300049583 Ga0501067_0000064 Ga0501067_0000064_44213_45514 398
117 3300049589 Ga0501073_0011997 Ga0501073_0011997_414_1715 398
118 iso_pu_bacteria 2919692658 2919693704 398
119 3300005471 Ga0070698_100015035 Ga0070698_1000150351 399
120 3300031730 Ga0307516_10163121 Ga0307516_101631211 399
121 3300048917 Ga0496114_0157111 Ga0496114_0157111_63_1370 399
122 3300053158 Ga0500627_0055831 Ga0500627_0055831_297_1607 400
123 iso_pu_bacteria 2721755487 2722728498 401
124 iso_pu_bacteria 3003233435 3003235047 401
125 3300009093 Ga0105240_10000306 Ga0105240_1000030640 402
126 3300009174 Ga0105241_10018488 Ga0105241_100184883 402
127 3300013296 Ga0157374_10000001 Ga0157374_10000001603 402
128 3300013306 Ga0163162_10126023 Ga0163162_101260231 402
129 3300025913 Ga0207695_10000810 Ga0207695_1000081019 402
130 3300025914 Ga0207671_10024853 Ga0207671_100248533 402
131 3300049572 Ga0501036_0059716 Ga0501036_0059716_1382_2707 403
132 3300005843 Ga0068860_100000004 Ga0068860_100000004116 404
133 3300006881 Ga0068865_100123790 Ga0068865_1001237902 404
134 3300013306 Ga0163162_10000374 Ga0163162_100003743 404
135 3300028381 Ga0268264_10000011 Ga0268264_10000011251 404
136 3300031238 Ga0265332_10010889 Ga0265332_100108895 404
137 3300031711 Ga0265314_10040008 Ga0265314_100400083 404
138 3300031712 Ga0265342_10057459 Ga0265342_100574592 404
139 3300044712 Ga0453684_0006234 Ga0453684_0006234_7090_8415 404
140 3300005335 Ga0070666_10015507 Ga0070666_100155073 405
141 3300006237 Ga0097621_100037556 Ga0097621_1000375562 407
142 3300009093 Ga0105240_10037174 Ga0105240_100371743 408
143 3300009545 Ga0105237_10021191 Ga0105237_100211912 408
144 3300010375 Ga0105239_10014245 Ga0105239_100142455 408
145 3300025914 Ga0207671_10023299 Ga0207671_100232993 408
146 3300028786 Ga0307517_10005403 Ga0307517_1000540313 408
147 3300005458 Ga0070681_10045359 Ga0070681_100453594 409
148 3300046524 Ga0495648_0002065 Ga0495648_0002065_10752_12140 409
149 3300053092 Ga0500583_0000670 Ga0500583_0000670_3862_5250 409
150 3300028794 Ga0307515_10000677 Ga0307515_1000067724 410
151 3300035113 Ga0373936_0000007 Ga0373936_0000007_101120_102505 411
152 3300005327 Ga0070658_10049912 Ga0070658_100499124 412
153 3300005335 Ga0070666_10001486 Ga0070666_1000148616 412
154 3300005617 Ga0068859_100000041 Ga0068859_10000004122 412
155 3300005618 Ga0068864_100010289 Ga0068864_1000102892 412
156 3300005841 Ga0068863_100005723 Ga0068863_1000057235 412
157 3300005842 Ga0068858_100015608 Ga0068858_1000156082 412
158 3300005843 Ga0068860_100014912 Ga0068860_1000149125 412
159 3300006931 Ga0097620_100000041 Ga0097620_100000041143 412
160 3300009101 Ga0105247_10010463 Ga0105247_100104635 412
161 3300009174 Ga0105241_10001094 Ga0105241_1000109416 412
162 3300009176 Ga0105242_10042135 Ga0105242_100421352 412
163 3300009545 Ga0105237_10025016 Ga0105237_100250165 412
164 3300009553 Ga0105249_10002496 Ga0105249_100024962 412
165 3300013306 Ga0163162_10007767 Ga0163162_100077672 412
166 3300014325 Ga0163163_10110933 Ga0163163_101109332 412
167 3300025903 Ga0207680_10000151 Ga0207680_1000015127 412
168 3300025909 Ga0207705_10136627 Ga0207705_101366272 412
169 3300025911 Ga0207654_10001437 Ga0207654_100014377 412
170 3300025914 Ga0207671_10010425 Ga0207671_100104253 412
171 3300025942 Ga0207689_10005245 Ga0207689_100052456 412
172 3300025961 Ga0207712_10018576 Ga0207712_100185762 412
173 3300025986 Ga0207658_10171341 Ga0207658_101713412 412
174 3300026023 Ga0207677_10022502 Ga0207677_100225023 412
175 3300026035 Ga0207703_10002229 Ga0207703_100022295 412
176 3300026088 Ga0207641_10000369 Ga0207641_1000036921 412
177 3300026095 Ga0207676_10014969 Ga0207676_100149692 412
178 3300028381 Ga0268264_10014138 Ga0268264_100141383 412
179 3300031616 Ga0307508_10003175 Ga0307508_1000317512 412
180 3300046522 Ga0495643_0024523 Ga0495643_0024523_439_1788 412
181 3300003320 rootH2_10001545 rootH2_1000154514 413
182 3300047443 Ga0495687_000001 Ga0495687_000001_1115809_1117170 413
183 3300005548 Ga0070665_100000001 Ga0070665_10000000198 414
184 3300028379 Ga0268266_10000065 Ga0268266_10000065116 414
185 3300031730 Ga0307516_10001323 Ga0307516_100013239 414
186 3300053153 Ga0500616_0075726 Ga0500616_0075726_124_1485 414
187 3300005842 Ga0068858_100318397 Ga0068858_1003183972 415
188 3300006237 Ga0097621_100051978 Ga0097621_1000519782 415
189 3300006358 Ga0068871_100003567 Ga0068871_1000035678 415
190 3300009093 Ga0105240_10144112 Ga0105240_101441122 415
191 3300013297 Ga0157378_10009738 Ga0157378_100097384 415
192 3300005563 Ga0068855_100093860 Ga0068855_1000938602 416
193 3300005577 Ga0068857_100045654 Ga0068857_1000456543 416
194 3300005578 Ga0068854_100069851 Ga0068854_1000698512 416
195 3300005616 Ga0068852_100006263 Ga0068852_1000062633 416
196 3300013104 Ga0157370_10072566 Ga0157370_100725662 416
197 3300013105 Ga0157369_10116236 Ga0157369_101162361 416
198 3300013307 Ga0157372_10008093 Ga0157372_100080933 416
199 3300025949 Ga0207667_10002800 Ga0207667_100028005 416
200 3300025981 Ga0207640_10027620 Ga0207640_100276202 416
201 3300026116 Ga0207674_10003770 Ga0207674_100037703 416
202 3300026142 Ga0207698_10018693 Ga0207698_100186932 416
203 3300003316 rootH1_10067227 rootH1_100672272 417
204 3300031507 Ga0307509_10038715 Ga0307509_100387151 417

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13520

AA_permease_2

Amino acid permease

18

436

0.86

PF00324

AA_permease

Amino acid permease

21

448

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
5oqt-assembly1.cif.gz_A crystal structure of a bacterial cationic amino acid transporter (cat) homologue 0.7945 9 380
6f2g-assembly1.cif.gz_A bacterial asc transporter crystal structure in open to in conformation 0.7931 20 400
7dsk-assembly1.cif.gz_B overall structure of the lat1-4f2hc bound with jx-075 0.7778 13 398
6li9-assembly1.cif.gz_B heteromeric amino acid transporter b0,+at-rbat complex bound with arginine 0.7738 18 389
6f34-assembly1.cif.gz_A crystal structure of a bacterial cationic amino acid transporter (cat) homologue bound to arginine. 0.7532 9 410
ID Description Score Start End Superfamily
af_Q09143_27_439_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8629 14 366 1.20.1740.10
af_P25737_13_472_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8469 14 381 1.20.1740.10
af_A0A0R4INA7_27_507_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.844 13 366 1.20.1740.10
af_O60113_56_528_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8355 13 378 1.20.1740.10
af_P71892_30_474_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8311 13 388 1.20.1740.10
ID Description Score Start End GO Terms
AF-A0A524JDX1-F1-model_v4 Amino acid permease 0.9491 23 328 GO:0016020
GO:0022857
AF-A0A4Q3C099-F1-model_v4 Ethanolamine permease 0.9286 26 375 GO:0005886
GO:0022857
AF-A0A3L7MU08-F1-model_v4 deleted 0.9276 2 381
AF-X1BUP3-F1-model_v4 Amino acid permease/ SLC12A domain-containing protein 0.9275 71 335 GO:0005886
GO:0022857
AF-A0A2N0A016-F1-model_v4 Ethanolamine permease 0.9171 1 379 GO:0005886
GO:0022857

Feature Viewer

pLDDT pTM Quality
74.28 0.73 High
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Predicted Structure (AlphaFold2)

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