F298653
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 194 | 176 | 123 | 406 |
Family's Representative Sequence
| Representative Sequence | 3300013105|Ga0157369_10000119|Ga0157369_1000011989 |
| Length | 449 |
| Sequence | MSWSVQHRHNRQRRLDPDAARRESHRSVPDQKGTNVTITNPATTVSGPRWRDEARPQDSAGWIHRAQEVADILAVDALERDRANATPYTEVQLLKESGLVTLLGPREHGGAGESWDTAYKVIRAVARGDGSIGQVLGYHYLWAWAARLVATEEQIAAVEELYTTNNFVFGGAVNPRDSDLTIREDGDELVYSGRKSFSTGGQISDLTVLEGVLEGTETHIFAIVPTAQEGIVFAGDWDSLGQRLTESGSVEIRDVRVPWTAAAGFVDREFQPLVYNTLNVPTIQLVFANFYLGIAQGALEAASSYTRSTTRPWPYGGDNKQRAGEEWYLLEGYGELQSKLWADEALLDVAGAEISALLHEPREGLSERRRGEVAVRIAAGKLRIVDDGLEVATKIYELAGARASASSVGLDIFWRNLRTHSLHDPIAYKKREVGEYVLLNQIPEPTWYT |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2565956761 | Rhodococcus qingshengii BKS 20-40 | Isolate | Rhizosphere |
| 2 | 2582581313 | Streptomyces mirabilis OV308 | Isolate | Rhizosphere |
| 3 | 2585427649 | Amycolatopsis japonica MG417-CF17, DSM 44213 | Isolate | Unclassified |
| 4 | 2585428157 | Microbacterium sp. CF335 | Isolate | Rhizosphere |
| 5 | 2643221553 | Microbacterium sp. Root553 | Isolate | Unclassified |
| 6 | 2643221576 | Nocardioides sp. Root614 | Isolate | Unclassified |
| 7 | 2643221590 | Nocardioides sp. Root682 | Isolate | Unclassified |
| 8 | 2643221604 | Nocardioides sp. Root190 | Isolate | Unclassified |
| 9 | 2643221617 | Nocardioides sp. Root79 | Isolate | Unclassified |
| 10 | 2643221620 | Nocardioides sp. Root240 | Isolate | Unclassified |
| 11 | 2643221632 | Leifsonia sp. Root112D2 | Isolate | Unclassified |
| 12 | 2643221647 | Streptomyces sp. Root369 | Isolate | Unclassified |
| 13 | 2643221697 | Aeromicrobium sp. Root495 | Isolate | Unclassified |
| 14 | 2643221724 | Microbacterium sp. Root280D1 | Isolate | Unclassified |
| 15 | 2728369380 | Microbacterium sp. 1.5R | Isolate | Rhizosphere |
| 16 | 2738541305 | Nocardioides sp. CF167 | Isolate | Unclassified |
| 17 | 2738543034 | Rhodococcus sp. OK269 | Isolate | Unclassified |
| 18 | 2747842429 | Microbacterium sp. WCS2014-259 | Isolate | Unclassified |
| 19 | 2773857758 | Microbacterium chocolatum 1320 | Isolate | Unclassified |
| 20 | 2773857762 | Nocardioides sp. SAI-095 | Isolate | Unclassified |
| 21 | 2784746768 | Streptomyces griseorubiginosus SAI-142 | Isolate | Unclassified |
| 22 | 2786546132 | Streptomyces sp. W SAI-097 | Isolate | Unclassified |
| 23 | 2795385472 | Herbihabitans rhizosphaerae DSM 101727 | Isolate | Rhizosphere |
| 24 | 2808606439 | Nocardioides sp. SLBN-172 | Isolate | Unclassified |
| 25 | 2808606522 | Amycolatopsis sp. BJA-103 | Isolate | Unclassified |
| 26 | 2811994878 | Nocardioides sp. SLBN-169 | Isolate | Unclassified |
| 27 | 2862382967 | Streptomyces scabiei NRRL B-2795 | Isolate | Nodule |
| 28 | 2866552031 | Saccharopolyspora rhizosphaerae H219 | Isolate | Unclassified |
| 29 | 2867428634 | Streptomyces sp. RP5T | Isolate | Unclassified |
| 30 | 2873314349 | Sphaerisporangium siamense DSM 45784 | Isolate | Rhizosphere |
| 31 | 2875391855 | Streptomyces cavourensis 1AS2a | Isolate | Rhizosphere |
| 32 | 2877676314 | Streptomyces griseorubiginosus 3E-1 | Isolate | Unclassified |
| 33 | 2891554331 | Microbispora sp. CL1-1 | Isolate | Unclassified |
| 34 | 2891968417 | Nocardioides luteus SAI-037 | Isolate | Unclassified |
| 35 | 2899359706 | Amycolatopsis anabasis EGI 650086 | Isolate | Unclassified |
| 36 | 2904509784 | Microbacterium sp. 1676 | Isolate | Rhizosphere |
| 37 | 2904535858 | Rhodococcus erythropolis 2017 | Isolate | Unclassified |
| 38 | 2904765812 | Rhodococcus fascians 1590 | Isolate | Rhizosphere |
| 39 | 2904770941 | Rhodococcus fascians 1339 | Isolate | Rhizosphere |
| 40 | 2908678064 | Microbacterium sp. 1518 | Isolate | Rhizosphere |
| 41 | 2908811453 | Rhodococcus sp. 1R11 | Isolate | Unclassified |
| 42 | 2912757875 | Streptomyces sp. S4.7 | Isolate | Rhizosphere |
| 43 | 2915358134 | Pseudonocardia pini CAP47R | Isolate | Unclassified |
| 44 | 2915768154 | Amycolatopsis pittospori PIP199 | Isolate | Unclassified |
| 45 | 2919069694 | Microbacterium sp. 1154 | Isolate | Unclassified |
| 46 | 2919420072 | Rhodococcus fascians 3241 | Isolate | Rhizosphere |
| 47 | 2919432681 | Rhodococcus sp. 3258 | Isolate | Rhizosphere |
| 48 | 2922554459 | Rhodococcus sp. 66b | Isolate | Unclassified |
| 49 | 2946080515 | Microbacterium sp. W4I20 | Isolate | Rhizosphere |
| 50 | 2954380949 | Streptomyces ciscaucasicus W1I15 | Isolate | Rhizosphere |
| 51 | 2954673503 | Streptomyces sp. SAI-119 | Isolate | Rhizosphere |
| 52 | 2954682443 | Streptomyces sp. SAI-149 | Isolate | Rhizosphere |
| 53 | 2954691527 | Streptomyces sp. SAI-127 | Isolate | Rhizosphere |
| 54 | 2954701450 | Streptomyces sp. SAI-144 | Isolate | Rhizosphere |
| 55 | 2954711539 | Streptomyces sp. SAI-090 | Isolate | Rhizosphere |
| 56 | 2954721474 | Streptomyces sp. SAI-117 | Isolate | Rhizosphere |
| 57 | 2954731030 | Streptomyces sp. SAI-133 | Isolate | Rhizosphere |
| 58 | 2954740390 | Streptomyces sp. SAI-041 | Isolate | Rhizosphere |
| 59 | 2954749733 | Streptomyces sp. SAI-135 | Isolate | Rhizosphere |
| 60 | 2954759201 | Streptomyces sp. SAI-208 | Isolate | Rhizosphere |
| 61 | 2974294766 | Microbacterium proteolyticum SORGH_AS 209 | Isolate | Unclassified |
| 62 | 2974315732 | Rhodococcus sp. SORGH_AS 301 | Isolate | Unclassified |
| 63 | 2974324384 | Microbacterium sp. SORGH_AS 344 | Isolate | Unclassified |
| 64 | 2977228692 | Microbacterium sp. SORGH_AS 421 | Isolate | Unclassified |
| 65 | 2977236895 | Microbacterium testaceum SORGH_AS 426 | Isolate | Unclassified |
| 66 | 2984523437 | Rhodococcus sp. SORGH_AS303 | Isolate | Aerial Root |
| 67 | 2984542743 | Microbacterium sp. SORGH_AS454 | Isolate | Aerial Root |
| 68 | 2984592036 | Aeromicrobium sp. SORGH_AS981 | Isolate | Aerial Root |
| 69 | 3006969106 | Bacillus sp. FJAT-50079 | Isolate | Rhizosphere |
| 70 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 71 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 72 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 73 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 74 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 75 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 76 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 77 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 78 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 79 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 80 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 81 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 82 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 83 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 84 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 85 | 3300009979 | Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG | Metagenome | Rhizosphere |
| 86 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 87 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 88 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 89 | 3300015262 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG | Metagenome | Rhizosphere |
| 90 | 3300015688 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 | Metagenome | Rhizosphere |
| 91 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 92 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 95 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 96 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 97 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 98 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 99 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 100 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 101 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 102 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 103 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 104 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 105 | 3300031838 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM | Metagenome | Unclassified |
| 106 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 107 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 108 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 109 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 110 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 111 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 112 | 3300041406 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 | Metagenome | Rhizosphere |
| 113 | 3300042010 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 | Metagenome | Rhizosphere |
| 114 | 3300042121 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 | Metagenome | Rhizosphere |
| 115 | 3300042138 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 | Metagenome | Rhizosphere |
| 116 | 3300042157 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 | Metagenome | Rhizosphere |
| 117 | 3300042185 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515W_E14_080116_2592 | Metagenome | Rhizosphere |
| 118 | 3300042531 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 | Metagenome | Rhizosphere |
| 119 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 120 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 121 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 122 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 123 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 124 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 125 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 126 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 127 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 128 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 135 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 136 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 137 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 138 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 139 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 140 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 141 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 142 | 3300046692 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere | Metagenome | Rhizosphere |
| 143 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 144 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 145 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 146 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 147 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 148 | 3300048089 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere | Metagenome | Rhizosphere |
| 149 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 150 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 151 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 152 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 153 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 154 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 155 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 156 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 157 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 158 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 159 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 160 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 161 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 162 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 163 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 164 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 165 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 166 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 167 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 168 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 169 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 170 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 171 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 172 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 173 | 3300053095 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere | Metagenome | Endosphere |
| 174 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 175 | 8008558824 | Streptomyces scabiei NRRL B-2795 | Isolate | Nodule |
| 176 | 8056207758 | Saccharopolyspora indica KCTC 29208 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 63.4 |
| Metatranscriptomes | 0 |
| Isolates | 36.6 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 1.55 |
| Bulb | 0 |
| Endosphere | 6.7 |
| Nodule | 1.03 |
| Rhizoplane | 1.55 |
| Rhizosphere | 56.7 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 32.47 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | rootH1_10003700 | 3300003316 | Bacteria | 13804 |
| 2 | Ga0065714_10008744 | 3300005288 | Bacteria | 3535 |
| 3 | Ga0070658_10243503 | 3300005327 | Bacteria | 1524 |
| 4 | Ga0070671_100009877 | 3300005355 | Bacteria | 7662 |
| 5 | Ga0070667_100253658 | 3300005367 | Bacteria | 1573 |
| 6 | Ga0070665_100002215 | 3300005548 | Bacteria | 21692 |
| 7 | Ga0068856_100356342 | 3300005614 | Bacteria | 1482 |
| 8 | Ga0068863_100000693 | 3300005841 | Bacteria | 33877 |
| 9 | Ga0068863_100043170 | 3300005841 | Bacteria | 4281 |
| 10 | Ga0081455_10000424 | 3300005937 | Bacteria | 55362 |
| 11 | Ga0075365_10053942 | 3300006038 | Bacteria | 2664 |
| 12 | Ga0075365_10178980 | 3300006038 | Bacteria | 1482 |
| 13 | Ga0075363_100002126 | 3300006048 | Bacteria | 7959 |
| 14 | Ga0075364_10102700 | 3300006051 | Bacteria | 1904 |
| 15 | Ga0075367_10002883 | 3300006178 | Bacteria | 8002 |
| 16 | Ga0075370_10043498 | 3300006353 | Bacteria | 2538 |
| 17 | Ga0105244_10056632 | 3300009036 | Bacteria | 1984 |
| 18 | Ga0105032_101167 | 3300009979 | Bacteria | 2428 |
| 19 | Ga0157369_10000119 | 3300013105 | Bacteria | 111542 |
| 20 | Ga0182008_10005924 | 3300014497 | Bacteria | 6899 |
| 21 | Ga0157379_10009163 | 3300014968 | Bacteria | 8622 |
| 22 | Ga0182007_10000745 | 3300015262 | Bacteria | 18402 |
| 23 | Ga0183367_1003 | 3300015688 | Bacteria | 814276 |
| 24 | Ga0207426_1000533 | 3300025302 | Bacteria | 54735 |
| 25 | Ga0207426_1009810 | 3300025302 | Bacteria | 3757 |
| 26 | Ga0207655_1043207 | 3300025728 | Bacteria | 1909 |
| 27 | Ga0207647_10007167 | 3300025904 | Bacteria | 8085 |
| 28 | Ga0207705_10226123 | 3300025909 | Bacteria | 1422 |
| 29 | Ga0207644_10006628 | 3300025931 | Bacteria | 7547 |
| 30 | Ga0207641_10001946 | 3300026088 | Bacteria | 19813 |
| 31 | Ga0268264_10142643 | 3300028381 | Bacteria | 2138 |
| 32 | Ga0307517_10027304 | 3300028786 | Bacteria | 6861 |
| 33 | Ga0307515_10000106 | 3300028794 | Bacteria | 197218 |
| 34 | Ga0307515_10050347 | 3300028794 | Bacteria | 6241 |
| 35 | Ga0265338_10000127 | 3300028800 | Bacteria | 139864 |
| 36 | Ga0265338_10002115 | 3300028800 | Bacteria | 30610 |
| 37 | Ga0307511_10013882 | 3300030521 | Bacteria | 7856 |
| 38 | Ga0307513_10000003 | 3300031456 | Bacteria | 590921 |
| 39 | Ga0307513_10003347 | 3300031456 | Bacteria | 21792 |
| 40 | Ga0307513_10008528 | 3300031456 | Bacteria | 13096 |
| 41 | Ga0307513_10107564 | 3300031456 | Bacteria | 2791 |
| 42 | Ga0307509_10010783 | 3300031507 | Bacteria | 11144 |
| 43 | Ga0307508_10007071 | 3300031616 | Bacteria | 10460 |
| 44 | Ga0307508_10115802 | 3300031616 | Bacteria | 2282 |
| 45 | Ga0307518_10002222 | 3300031838 | Bacteria | 14195 |
| 46 | Ga0307410_10138773 | 3300031852 | Bacteria | 1796 |
| 47 | Ga0307406_10001073 | 3300031901 | Bacteria | 15209 |
| 48 | Ga0307407_10067952 | 3300031903 | Bacteria | 2109 |
| 49 | Ga0307409_100261300 | 3300031995 | Bacteria | 1589 |
| 50 | Ga0307507_10012921 | 3300033179 | Bacteria | 10235 |
| 51 | Ga0307510_10020399 | 3300033180 | Bacteria | 7745 |
| 52 | Ga0439439_0005323 | 3300041406 | Bacteria | 2934 |
| 53 | Ga0439452_009402 | 3300042010 | Bacteria | 2880 |
| 54 | Ga0450919_001129 | 3300042121 | Bacteria | 3461 |
| 55 | Ga0450903_000118 | 3300042138 | Bacteria | 17039 |
| 56 | Ga0439458_0003101 | 3300042157 | Bacteria | 3950 |
| 57 | Ga0450909_002504 | 3300042185 | Bacteria | 2603 |
| 58 | Ga0450918_003280 | 3300042531 | Bacteria | 3021 |
| 59 | Ga0466969_0003849 | 3300044656 | Bacteria | 7969 |
| 60 | Ga0466969_0024758 | 3300044656 | Bacteria | 3087 |
| 61 | Ga0466972_0002068 | 3300044658 | Bacteria | 9819 |
| 62 | Ga0466972_0018787 | 3300044658 | Bacteria | 3454 |
| 63 | Ga0466966_0002653 | 3300044684 | Bacteria | 11717 |
| 64 | Ga0466966_0056387 | 3300044684 | Bacteria | 2485 |
| 65 | Ga0466961_0050012 | 3300044693 | Bacteria | 2670 |
| 66 | Ga0466961_0106251 | 3300044693 | Bacteria | 1767 |
| 67 | Ga0466971_0008697 | 3300044719 | Bacteria | 4430 |
| 68 | Ga0466970_0004928 | 3300044765 | Bacteria | 6592 |
| 69 | Ga0466960_0051076 | 3300044901 | Bacteria | 1996 |
| 70 | Ga0466959_0060864 | 3300045049 | Bacteria | 2746 |
| 71 | Ga0466967_0018085 | 3300045976 | Bacteria | 5623 |
| 72 | Ga0495629_0059463 | 3300046459 | Bacteria | 2671 |
| 73 | Ga0495629_0064410 | 3300046459 | Bacteria | 2559 |
| 74 | Ga0495651_0009608 | 3300046462 | Bacteria | 7432 |
| 75 | Ga0495664_0001478 | 3300046477 | Bacteria | 12436 |
| 76 | Ga0495630_0021300 | 3300046517 | Bacteria | 4787 |
| 77 | Ga0495652_0025759 | 3300046529 | Bacteria | 5199 |
| 78 | Ga0495665_0028952 | 3300046531 | Bacteria | 2968 |
| 79 | Ga0495587_0010295 | 3300046536 | Bacteria | 5960 |
| 80 | Ga0495668_0018093 | 3300046616 | Bacteria | 4077 |
| 81 | Ga0495634_0000597 | 3300046642 | Bacteria | 35071 |
| 82 | Ga0495625_0038212 | 3300046660 | Bacteria | 3515 |
| 83 | Ga0495625_0042524 | 3300046660 | Bacteria | 3301 |
| 84 | Ga0495635_0010002 | 3300046663 | Bacteria | 6631 |
| 85 | Ga0495588_0012012 | 3300046674 | Bacteria | 4080 |
| 86 | Ga0495588_0016911 | 3300046674 | Bacteria | 3533 |
| 87 | Ga0495657_0001598 | 3300046675 | Bacteria | 19479 |
| 88 | Ga0495646_0005551 | 3300046680 | Bacteria | 7977 |
| 89 | Ga0495671_0005394 | 3300046692 | Bacteria | 7494 |
| 90 | Ga0495581_0018377 | 3300047315 | Bacteria | 4060 |
| 91 | Ga0495604_0007849 | 3300047317 | Bacteria | 8446 |
| 92 | Ga0495676_0000968 | 3300047321 | Bacteria | 24134 |
| 93 | Ga0495676_0001495 | 3300047321 | Bacteria | 20192 |
| 94 | Ga0495593_0029821 | 3300047673 | Bacteria | 2988 |
| 95 | Ga0495602_0051167 | 3300048088 | Bacteria | 3682 |
| 96 | Ga0495614_0009209 | 3300048089 | Bacteria | 4373 |
| 97 | Ga0496101_0032487 | 3300048904 | Bacteria | 3674 |
| 98 | Ga0496102_0000017 | 3300048905 | Bacteria | 284200 |
| 99 | Ga0496103_0000019 | 3300048906 | Bacteria | 234311 |
| 100 | Ga0496116_0000363 | 3300048919 | Bacteria | 69750 |
| 101 | Ga0496117_0000101 | 3300048920 | Bacteria | 191796 |
| 102 | Ga0496118_0000267 | 3300048921 | Bacteria | 91458 |
| 103 | Ga0496119_0001242 | 3300048922 | Bacteria | 31717 |
| 104 | Ga0496120_0002757 | 3300048923 | Bacteria | 17134 |
| 105 | Ga0496121_0002464 | 3300048924 | Bacteria | 28251 |
| 106 | Ga0496124_0034055 | 3300048927 | Bacteria | 4476 |
| 107 | Ga0496125_0025696 | 3300048928 | Bacteria | 5386 |
| 108 | Ga0496125_0080733 | 3300048928 | Bacteria | 2487 |
| 109 | Ga0496126_0000198 | 3300048929 | Bacteria | 133897 |
| 110 | Ga0501032_0118562 | 3300049569 | Bacteria | 1750 |
| 111 | Ga0501033_0002473 | 3300049570 | Bacteria | 15660 |
| 112 | Ga0501034_0003459 | 3300049571 | Bacteria | 17984 |
| 113 | Ga0501036_0001682 | 3300049572 | Bacteria | 17162 |
| 114 | Ga0501039_0019765 | 3300049575 | Bacteria | 5163 |
| 115 | Ga0501043_0001475 | 3300049579 | Bacteria | 20558 |
| 116 | Ga0501070_0004511 | 3300049586 | Bacteria | 11953 |
| 117 | Ga0501074_0003199 | 3300049590 | Bacteria | 11549 |
| 118 | Ga0501035_0001758 | 3300049822 | Bacteria | 21880 |
| 119 | nmdc:mga00v17_20700_c1 | 3300050491 | Bacteria | 3772 |
| 120 | nmdc:mga0yw44_159431_c1 | 3300050492 | Bacteria | 1476 |
| 121 | nmdc:mga06z11_8339_c1 | 3300050494 | Bacteria | 4316 |
| 122 | Ga0500640_003525 | 3300053095 | Bacteria | 5491 |
| 123 | Ga0500616_0000113 | 3300053153 | Bacteria | 150722 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | iso_pu_bacteria | 2915358134 | 2915363186 | 368 |
| 2 | 3300028800 | Ga0265338_10000127 | Ga0265338_1000012766 | 375 |
| 3 | 3300006038 | Ga0075365_10178980 | Ga0075365_101789802 | 377 |
| 4 | 3300050492 | nmdc:mga0yw44_159431_c1 | nmdc:mga0yw44_159431_c1_66_1208 | 377 |
| 5 | iso_pu_bacteria | 2912757875 | 2912763398 | 377 |
| 6 | 3300028800 | Ga0265338_10002115 | Ga0265338_1000211510 | 378 |
| 7 | 3300028794 | Ga0307515_10050347 | Ga0307515_100503474 | 383 |
| 8 | 3300009979 | Ga0105032_101167 | Ga0105032_1011672 | 386 |
| 9 | iso_pu_bacteria | 3006969106 | 3006969191 | 386 |
| 10 | iso_pu_bacteria | 2795385472 | 2795797127 | 387 |
| 11 | 3300044658 | Ga0466972_0018787 | Ga0466972_0018787_926_2101 | 388 |
| 12 | 3300044901 | Ga0466960_0051076 | Ga0466960_0051076_199_1374 | 388 |
| 13 | 3300005937 | Ga0081455_10000424 | Ga0081455_1000042434 | 392 |
| 14 | iso_pu_bacteria | 2585427649 | 2586063776 | 392 |
| 15 | iso_pu_bacteria | 2808606522 | 2809586974 | 392 |
| 16 | iso_pu_bacteria | 2915768154 | 2915772726 | 392 |
| 17 | 3300031838 | Ga0307518_10002222 | Ga0307518_100022223 | 393 |
| 18 | iso_pu_bacteria | 8056207758 | 8056210391 | 395 |
| 19 | 3300005841 | Ga0068863_100000693 | Ga0068863_10000069328 | 397 |
| 20 | 3300014968 | Ga0157379_10009163 | Ga0157379_100091634 | 397 |
| 21 | 3300026088 | Ga0207641_10001946 | Ga0207641_1000194611 | 397 |
| 22 | 3300048904 | Ga0496101_0032487 | Ga0496101_0032487_720_1928 | 397 |
| 23 | 3300048905 | Ga0496102_0000017 | Ga0496102_0000017_5827_7035 | 397 |
| 24 | 3300048906 | Ga0496103_0000019 | Ga0496103_0000019_165750_166958 | 397 |
| 25 | 3300048919 | Ga0496116_0000363 | Ga0496116_0000363_38312_39520 | 397 |
| 26 | 3300048920 | Ga0496117_0000101 | Ga0496117_0000101_24924_26132 | 397 |
| 27 | 3300048921 | Ga0496118_0000267 | Ga0496118_0000267_24869_26077 | 397 |
| 28 | 3300048922 | Ga0496119_0001242 | Ga0496119_0001242_23619_24827 | 397 |
| 29 | 3300048923 | Ga0496120_0002757 | Ga0496120_0002757_9977_11185 | 397 |
| 30 | 3300048924 | Ga0496121_0002464 | Ga0496121_0002464_9048_10256 | 397 |
| 31 | 3300048927 | Ga0496124_0034055 | Ga0496124_0034055_2902_4110 | 397 |
| 32 | 3300048928 | Ga0496125_0080733 | Ga0496125_0080733_909_2117 | 397 |
| 33 | 3300048929 | Ga0496126_0000198 | Ga0496126_0000198_65358_66566 | 397 |
| 34 | iso_pu_bacteria | 2565956761 | 2566996173 | 397 |
| 35 | iso_pu_bacteria | 2904535858 | 2904540809 | 397 |
| 36 | iso_pu_bacteria | 2922554459 | 2922554900 | 397 |
| 37 | 3300006048 | Ga0075363_100002126 | Ga0075363_1000021266 | 398 |
| 38 | 3300006353 | Ga0075370_10043498 | Ga0075370_100434982 | 398 |
| 39 | 3300025728 | Ga0207655_1043207 | Ga0207655_10432072 | 398 |
| 40 | 3300046531 | Ga0495665_0028952 | Ga0495665_0028952_829_2052 | 398 |
| 41 | 3300046616 | Ga0495668_0018093 | Ga0495668_0018093_551_1774 | 398 |
| 42 | 3300046674 | Ga0495588_0016911 | Ga0495588_0016911_263_1486 | 398 |
| 43 | 3300047315 | Ga0495581_0018377 | Ga0495581_0018377_1179_2402 | 398 |
| 44 | 3300048928 | Ga0496125_0025696 | Ga0496125_0025696_2117_3340 | 398 |
| 45 | iso_pu_bacteria | 2904765812 | 2904766579 | 398 |
| 46 | iso_pu_bacteria | 2904770941 | 2904772752 | 398 |
| 47 | iso_pu_bacteria | 2908811453 | 2908811537 | 398 |
| 48 | iso_pu_bacteria | 2919420072 | 2919420986 | 398 |
| 49 | iso_pu_bacteria | 2919432681 | 2919433256 | 398 |
| 50 | 3300005355 | Ga0070671_100009877 | Ga0070671_1000098775 | 399 |
| 51 | 3300005367 | Ga0070667_100253658 | Ga0070667_1002536582 | 399 |
| 52 | 3300005548 | Ga0070665_100002215 | Ga0070665_10000221517 | 399 |
| 53 | 3300005841 | Ga0068863_100043170 | Ga0068863_1000431702 | 399 |
| 54 | 3300025931 | Ga0207644_10006628 | Ga0207644_100066283 | 399 |
| 55 | 3300028381 | Ga0268264_10142643 | Ga0268264_101426432 | 399 |
| 56 | iso_pu_bacteria | 2582581313 | 2585305975 | 399 |
| 57 | iso_pu_bacteria | 2643221647 | 2644265163 | 399 |
| 58 | iso_pu_bacteria | 2738543034 | 2739364775 | 399 |
| 59 | iso_pu_bacteria | 2773857762 | 2774396454 | 399 |
| 60 | iso_pu_bacteria | 2784746768 | 2785366264 | 399 |
| 61 | iso_pu_bacteria | 2786546132 | 2786667233 | 399 |
| 62 | iso_pu_bacteria | 2808606439 | 2809198111 | 399 |
| 63 | iso_pu_bacteria | 2811994878 | 2812353199 | 399 |
| 64 | iso_pu_bacteria | 2862382967 | 2862392242 | 399 |
| 65 | iso_pu_bacteria | 2866552031 | 2866554533 | 399 |
| 66 | iso_pu_bacteria | 2867428634 | 2867429363 | 399 |
| 67 | iso_pu_bacteria | 2873314349 | 2873321982 | 399 |
| 68 | iso_pu_bacteria | 2875391855 | 2875393090 | 399 |
| 69 | iso_pu_bacteria | 2877676314 | 2877684254 | 399 |
| 70 | iso_pu_bacteria | 2891968417 | 2891969171 | 399 |
| 71 | iso_pu_bacteria | 2954380949 | 2954389584 | 399 |
| 72 | iso_pu_bacteria | 2954673503 | 2954682321 | 399 |
| 73 | iso_pu_bacteria | 2954682443 | 2954690603 | 399 |
| 74 | iso_pu_bacteria | 2954691527 | 2954700431 | 399 |
| 75 | iso_pu_bacteria | 2954701450 | 2954701797 | 399 |
| 76 | iso_pu_bacteria | 2954711539 | 2954719107 | 399 |
| 77 | iso_pu_bacteria | 2954721474 | 2954729077 | 399 |
| 78 | iso_pu_bacteria | 2954731030 | 2954732734 | 399 |
| 79 | iso_pu_bacteria | 2954740390 | 2954747976 | 399 |
| 80 | iso_pu_bacteria | 2954749733 | 2954751612 | 399 |
| 81 | iso_pu_bacteria | 2954759201 | 2954767101 | 399 |
| 82 | iso_pu_bacteria | 2974315732 | 2974318580 | 399 |
| 83 | iso_pu_bacteria | 2984523437 | 2984526792 | 399 |
| 84 | iso_pu_bacteria | 8008558824 | 8008560243 | 399 |
| 85 | 3300006038 | Ga0075365_10053942 | Ga0075365_100539422 | 400 |
| 86 | 3300031456 | Ga0307513_10000003 | Ga0307513_10000003532 | 400 |
| 87 | 3300031456 | Ga0307513_10107564 | Ga0307513_101075643 | 400 |
| 88 | 3300031852 | Ga0307410_10138773 | Ga0307410_101387732 | 400 |
| 89 | 3300031903 | Ga0307407_10067952 | Ga0307407_100679522 | 400 |
| 90 | 3300031995 | Ga0307409_100261300 | Ga0307409_1002613001 | 400 |
| 91 | 3300044656 | Ga0466969_0024758 | Ga0466969_0024758_1802_3022 | 400 |
| 92 | 3300044684 | Ga0466966_0002653 | Ga0466966_0002653_1426_2646 | 400 |
| 93 | 3300044719 | Ga0466971_0008697 | Ga0466971_0008697_2956_4176 | 400 |
| 94 | 3300045049 | Ga0466959_0060864 | Ga0466959_0060864_584_1804 | 400 |
| 95 | iso_pu_bacteria | 2643221576 | 2643892319 | 400 |
| 96 | iso_pu_bacteria | 2643221590 | 2643961371 | 400 |
| 97 | iso_pu_bacteria | 2643221604 | 2644033443 | 400 |
| 98 | iso_pu_bacteria | 2643221617 | 2644101516 | 400 |
| 99 | iso_pu_bacteria | 2643221620 | 2644118765 | 400 |
| 100 | iso_pu_bacteria | 2738541305 | 2738869344 | 400 |
| 101 | iso_pu_bacteria | 2891554331 | 2891562258 | 400 |
| 102 | 3300003316 | rootH1_10003700 | rootH1_100037008 | 402 |
| 103 | 3300005288 | Ga0065714_10008744 | Ga0065714_100087441 | 402 |
| 104 | 3300005327 | Ga0070658_10243503 | Ga0070658_102435031 | 402 |
| 105 | 3300005614 | Ga0068856_100356342 | Ga0068856_1003563421 | 402 |
| 106 | 3300006051 | Ga0075364_10102700 | Ga0075364_101027001 | 402 |
| 107 | 3300006178 | Ga0075367_10002883 | Ga0075367_100028834 | 402 |
| 108 | 3300009036 | Ga0105244_10056632 | Ga0105244_100566322 | 402 |
| 109 | 3300013105 | Ga0157369_10000119 | Ga0157369_1000011989 | 402 |
| 110 | 3300014497 | Ga0182008_10005924 | Ga0182008_100059246 | 402 |
| 111 | 3300015262 | Ga0182007_10000745 | Ga0182007_1000074514 | 402 |
| 112 | 3300015688 | Ga0183367_1003 | Ga0183367_1003637 | 402 |
| 113 | 3300025302 | Ga0207426_1000533 | Ga0207426_100053329 | 402 |
| 114 | 3300025302 | Ga0207426_1009810 | Ga0207426_10098104 | 402 |
| 115 | 3300025904 | Ga0207647_10007167 | Ga0207647_100071677 | 402 |
| 116 | 3300025909 | Ga0207705_10226123 | Ga0207705_102261231 | 402 |
| 117 | 3300028786 | Ga0307517_10027304 | Ga0307517_100273046 | 402 |
| 118 | 3300028794 | Ga0307515_10000106 | Ga0307515_10000106135 | 402 |
| 119 | 3300030521 | Ga0307511_10013882 | Ga0307511_100138828 | 402 |
| 120 | 3300031456 | Ga0307513_10003347 | Ga0307513_1000334711 | 402 |
| 121 | 3300031456 | Ga0307513_10008528 | Ga0307513_1000852813 | 402 |
| 122 | 3300031507 | Ga0307509_10010783 | Ga0307509_100107834 | 402 |
| 123 | 3300031616 | Ga0307508_10007071 | Ga0307508_100070714 | 402 |
| 124 | 3300031616 | Ga0307508_10115802 | Ga0307508_101158021 | 402 |
| 125 | 3300031901 | Ga0307406_10001073 | Ga0307406_1000107312 | 402 |
| 126 | 3300033179 | Ga0307507_10012921 | Ga0307507_100129216 | 402 |
| 127 | 3300033180 | Ga0307510_10020399 | Ga0307510_100203992 | 402 |
| 128 | 3300041406 | Ga0439439_0005323 | Ga0439439_0005323_1595_2920 | 402 |
| 129 | 3300042010 | Ga0439452_009402 | Ga0439452_009402_550_1851 | 402 |
| 130 | 3300042121 | Ga0450919_001129 | Ga0450919_001129_1521_2822 | 402 |
| 131 | 3300042138 | Ga0450903_000118 | Ga0450903_000118_8171_9388 | 402 |
| 132 | 3300042157 | Ga0439458_0003101 | Ga0439458_0003101_227_1444 | 402 |
| 133 | 3300042185 | Ga0450909_002504 | Ga0450909_002504_816_2141 | 402 |
| 134 | 3300042531 | Ga0450918_003280 | Ga0450918_003280_521_1822 | 402 |
| 135 | 3300044656 | Ga0466969_0003849 | Ga0466969_0003849_1656_2873 | 402 |
| 136 | 3300044658 | Ga0466972_0002068 | Ga0466972_0002068_7401_8618 | 402 |
| 137 | 3300044684 | Ga0466966_0056387 | Ga0466966_0056387_159_1376 | 402 |
| 138 | 3300044693 | Ga0466961_0050012 | Ga0466961_0050012_1443_2660 | 402 |
| 139 | 3300044693 | Ga0466961_0106251 | Ga0466961_0106251_402_1652 | 402 |
| 140 | 3300044765 | Ga0466970_0004928 | Ga0466970_0004928_2100_3350 | 402 |
| 141 | 3300045976 | Ga0466967_0018085 | Ga0466967_0018085_1190_2419 | 402 |
| 142 | 3300046459 | Ga0495629_0059463 | Ga0495629_0059463_1131_2348 | 402 |
| 143 | 3300046459 | Ga0495629_0064410 | Ga0495629_0064410_1131_2348 | 402 |
| 144 | 3300046462 | Ga0495651_0009608 | Ga0495651_0009608_2722_3939 | 402 |
| 145 | 3300046477 | Ga0495664_0001478 | Ga0495664_0001478_8752_9969 | 402 |
| 146 | 3300046517 | Ga0495630_0021300 | Ga0495630_0021300_3536_4753 | 402 |
| 147 | 3300046529 | Ga0495652_0025759 | Ga0495652_0025759_1953_3170 | 402 |
| 148 | 3300046536 | Ga0495587_0010295 | Ga0495587_0010295_469_1686 | 402 |
| 149 | 3300046642 | Ga0495634_0000597 | Ga0495634_0000597_20152_21369 | 402 |
| 150 | 3300046660 | Ga0495625_0038212 | Ga0495625_0038212_913_2130 | 402 |
| 151 | 3300046660 | Ga0495625_0042524 | Ga0495625_0042524_33_1250 | 402 |
| 152 | 3300046663 | Ga0495635_0010002 | Ga0495635_0010002_2753_3970 | 402 |
| 153 | 3300046674 | Ga0495588_0012012 | Ga0495588_0012012_1617_2834 | 402 |
| 154 | 3300046675 | Ga0495657_0001598 | Ga0495657_0001598_13332_14549 | 402 |
| 155 | 3300046680 | Ga0495646_0005551 | Ga0495646_0005551_2721_3938 | 402 |
| 156 | 3300046692 | Ga0495671_0005394 | Ga0495671_0005394_4450_5667 | 402 |
| 157 | 3300047317 | Ga0495604_0007849 | Ga0495604_0007849_7197_8414 | 402 |
| 158 | 3300047321 | Ga0495676_0000968 | Ga0495676_0000968_15129_16346 | 402 |
| 159 | 3300047321 | Ga0495676_0001495 | Ga0495676_0001495_2164_3381 | 402 |
| 160 | 3300047673 | Ga0495593_0029821 | Ga0495593_0029821_67_1284 | 402 |
| 161 | 3300048088 | Ga0495602_0051167 | Ga0495602_0051167_2412_3629 | 402 |
| 162 | 3300048089 | Ga0495614_0009209 | Ga0495614_0009209_1181_2398 | 402 |
| 163 | 3300049569 | Ga0501032_0118562 | Ga0501032_0118562_101_1318 | 402 |
| 164 | 3300049570 | Ga0501033_0002473 | Ga0501033_0002473_5381_6598 | 402 |
| 165 | 3300049571 | Ga0501034_0003459 | Ga0501034_0003459_223_1440 | 402 |
| 166 | 3300049572 | Ga0501036_0001682 | Ga0501036_0001682_9729_10946 | 402 |
| 167 | 3300049575 | Ga0501039_0019765 | Ga0501039_0019765_2636_3853 | 402 |
| 168 | 3300049579 | Ga0501043_0001475 | Ga0501043_0001475_9598_10815 | 402 |
| 169 | 3300049586 | Ga0501070_0004511 | Ga0501070_0004511_1559_2776 | 402 |
| 170 | 3300049590 | Ga0501074_0003199 | Ga0501074_0003199_1577_2794 | 402 |
| 171 | 3300049822 | Ga0501035_0001758 | Ga0501035_0001758_3363_4580 | 402 |
| 172 | 3300050491 | nmdc:mga00v17_20700_c1 | nmdc:mga00v17_20700_c1_766_2010 | 402 |
| 173 | 3300050494 | nmdc:mga06z11_8339_c1 | nmdc:mga06z11_8339_c1_1884_3101 | 402 |
| 174 | 3300053095 | Ga0500640_003525 | Ga0500640_003525_4241_5458 | 402 |
| 175 | 3300053153 | Ga0500616_0000113 | Ga0500616_0000113_48469_49695 | 402 |
| 176 | iso_pu_bacteria | 2585428157 | 2588108442 | 402 |
| 177 | iso_pu_bacteria | 2643221553 | 2643785493 | 402 |
| 178 | iso_pu_bacteria | 2643221632 | 2644182565 | 402 |
| 179 | iso_pu_bacteria | 2643221697 | 2644536545 | 402 |
| 180 | iso_pu_bacteria | 2643221724 | 2644679908 | 402 |
| 181 | iso_pu_bacteria | 2728369380 | 2730229374 | 402 |
| 182 | iso_pu_bacteria | 2747842429 | 2747954183 | 402 |
| 183 | iso_pu_bacteria | 2773857758 | 2774379651 | 402 |
| 184 | iso_pu_bacteria | 2899359706 | 2899366332 | 402 |
| 185 | iso_pu_bacteria | 2904509784 | 2904512442 | 402 |
| 186 | iso_pu_bacteria | 2908678064 | 2908679317 | 402 |
| 187 | iso_pu_bacteria | 2919069694 | 2919069966 | 402 |
| 188 | iso_pu_bacteria | 2946080515 | 2946081200 | 402 |
| 189 | iso_pu_bacteria | 2974294766 | 2974295806 | 402 |
| 190 | iso_pu_bacteria | 2974324384 | 2974324395 | 402 |
| 191 | iso_pu_bacteria | 2977228692 | 2977229529 | 402 |
| 192 | iso_pu_bacteria | 2977236895 | 2977238424 | 402 |
| 193 | iso_pu_bacteria | 2984542743 | 2984543796 | 402 |
| 194 | iso_pu_bacteria | 2984592036 | 2984593488 | 402 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4jek-assembly1.cif.gz_A | structure of dibenzothiophene monooxygenase (dszc) from rhodococcus erythropolis | 0.9487 | 18 | 402 |
| 6uug-assembly1.cif.gz_A | structure of methanesulfinate monooxygenase msuc from pseudomonas fluorescens at 1.69 angstrom resolution | 0.9464 | 19 | 402 |
| 3x0y-assembly2.cif.gz_E | crystal structure of fmn-bound dszc from rhodococcus erythropolis d-1 | 0.9453 | 18 | 402 |
| 5xdc-assembly1.cif.gz_D | crystal structure of indole-bound tdsc from paenibacillus sp. a11-2 | 0.9414 | 18 | 402 |
| 5xdd-assembly1.cif.gz_A | crystal structure of tertiary complex of tdsc from paenibacillus sp. a11-2 with fmn and indole | 0.9399 | 18 | 402 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3x0xB03 | Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.9843 | 232 | 402 | 1.20.140.10 |
| 5xb8B03 | Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.9641 | 231 | 402 | 1.20.140.10 |
| 3x0yE01 | Mainly Alpha;Orthogonal Bundle;Butyryl-Coa Dehydrogenase, subunit A; domain 1;Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.9511 | 18 | 124 | 1.10.540.10 |
| 4nxlB01 | Mainly Alpha;Orthogonal Bundle;Butyryl-Coa Dehydrogenase, subunit A; domain 1;Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.9465 | 18 | 124 | 1.10.540.10 |
| 3x0xH01 | Mainly Alpha;Orthogonal Bundle;Butyryl-Coa Dehydrogenase, subunit A; domain 1;Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.9386 | 19 | 124 | 1.10.540.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A399TB04-F1-model_v4 | Monooxygenase | 0.9844 | 20 | 402 |
GO:0004497
GO:0006552 GO:0008470 GO:0050660 |
| AF-A0A854L2V9-F1-model_v4 | deleted | 0.9839 | 12 | 402 |
|
| AF-A5CSG5-F1-model_v4 | Acyl-CoA dehydrogenase | 0.983 | 9 | 402 |
GO:0006552
GO:0008470 GO:0050660 |
| AF-A0A1Q8LMM0-F1-model_v4 | Acyl-CoA dehydrogenase, probable dibenzothiophene desulfurization enzyme | 0.9824 | 3 | 323 |
GO:0006552
GO:0008470 GO:0050660 |
| AF-S3JF52-F1-model_v4 | Sulfur acquisition oxidoreductase, SfnB family | 0.9799 | 249 | 402 |
GO:0016627
|
Predicted Structure (AlphaFold2)
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