F295637

General Info

Members Datasets Scaffolds Average Seq Length
192 131 192 380

Family's Representative Sequence

Representative Sequence 3300013104|Ga0157370_10054665|Ga0157370_100546652
Length 415
Sequence LKVKRGFFTVERFPKGLRLRALNGADAKTNIMRNWRGQLLLMAALSCLSWAAGCNNKGGEQAANTIKVGEYASLHGSEAAFGQSSHKATVLAIDQINAAGGVLGKKIDLISEDDQSQPGQSATIVKKLITRDHVVAVLGEVASGRSLEAAPICQENKIPMISPASTNPKVTETGDYIFRACYTDPFQGKLLAGFARKTLKVNRVAILSDVAAPYSVGLAKYFREPFVADGGQIIVEQKYSSHDKDFKAQLTAIKAENPEAIFVPGYYTEVGLIVLQARQLGITVPLFGGDGWEAPELLETAGNALEGTYYSTHYSPEETNKIVQDFVKKFRERYNGETPDAMAALGYDSALVLADALKRAGTTDPAKLRDAIAATKDLPCVTGTLTLDADRNPTKSAVIITVKDGKFKYVETISP

Samples

Sample ID Description Type Environment
1 3300002155 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
38 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
39 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
43 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
61 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
62 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
63 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
64 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
65 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
66 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
67 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
68 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
69 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
70 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
71 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
72 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
73 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
74 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
75 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
76 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
77 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
78 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
79 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
81 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
82 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
83 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
84 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
85 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
86 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
87 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
88 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
89 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
90 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
91 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
92 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
93 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
94 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
95 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
96 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
97 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
98 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
99 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
100 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
101 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
102 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
103 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
104 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
105 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
106 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
107 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
120 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
121 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
122 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
123 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
124 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
125 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
126 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
129 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
130 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
131 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.52
Nodule 0
Rhizoplane 0
Rhizosphere 96.88
Stem 0
Stem Tuber 0
Unclassified 2.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24033J26618_1000002 3300002155 Bacteria 48750
2 rootH2_10034133 3300003320 Bacteria 14331
3 rootH1_10073915 3300003323 Bacteria 7020
4 Ga0065704_10141855 3300005289 Bacteria 1510
5 Ga0070658_10057517 3300005327 Bacteria 3163
6 Ga0070658_10084141 3300005327 Bacteria 2616
7 Ga0070658_10180873 3300005327 Bacteria 1774
8 Ga0070660_100102746 3300005339 Bacteria 2266
9 Ga0070689_100060108 3300005340 Unclassified 2954
10 Ga0070689_100077940 3300005340 Bacteria 2598
11 Ga0070689_100106887 3300005340 Bacteria 2221
12 Ga0070661_100000717 3300005344 Bacteria 24279
13 Ga0070692_10136413 3300005345 Bacteria 1384
14 Ga0070675_100053126 3300005354 Bacteria 3332
15 Ga0070688_100011101 3300005365 Bacteria 5000
16 Ga0070688_100221199 3300005365 Unclassified 1334
17 Ga0070659_100307024 3300005366 Bacteria 1324
18 Ga0070705_100190911 3300005440 Unclassified 1396
19 Ga0070694_100068436 3300005444 Bacteria 2440
20 Ga0070678_100029781 3300005456 Bacteria 3743
21 Ga0070681_10094603 3300005458 Bacteria 2936
22 Ga0068867_100001315 3300005459 Bacteria 17194
23 Ga0070706_100163140 3300005467 Bacteria 2081
24 Ga0070698_100000145 3300005471 Bacteria 64197
25 Ga0070679_100094687 3300005530 Unclassified 2974
26 Ga0068853_100293965 3300005539 Bacteria 1500
27 Ga0070704_100143212 3300005549 Unclassified 1869
28 Ga0068855_100081109 3300005563 Bacteria 3761
29 Ga0068856_100195257 3300005614 Bacteria 2038
30 Ga0068856_100341794 3300005614 Bacteria 1515
31 Ga0068859_100019823 3300005617 Bacteria 6751
32 Ga0068864_100245049 3300005618 Bacteria 1662
33 Ga0068860_100058193 3300005843 Bacteria 3674
34 Ga0097621_100001766 3300006237 Bacteria 14839
35 Ga0068871_100011774 3300006358 Bacteria 6428
36 Ga0075428_100323432 3300006844 Bacteria 1657
37 Ga0097620_100019823 3300006931 Bacteria 6751
38 Ga0105240_10097591 3300009093 Bacteria 3580
39 Ga0105240_10133634 3300009093 Bacteria 2973
40 Ga0105240_10223278 3300009093 Bacteria 2193
41 Ga0111539_10085191 3300009094 Bacteria 3715
42 Ga0111539_10598316 3300009094 Bacteria 1284
43 Ga0105243_10116452 3300009148 Bacteria 2245
44 Ga0105238_10005289 3300009551 Bacteria 12761
45 Ga0105238_10012552 3300009551 Bacteria 8551
46 Ga0105249_10082758 3300009553 Bacteria 2986
47 Ga0157370_10054665 3300013104 Bacteria 3806
48 Ga0157374_10079015 3300013296 Bacteria 3116
49 Ga0157378_10004448 3300013297 Bacteria 12328
50 Ga0163162_10279343 3300013306 Bacteria 1802
51 Ga0157375_10048367 3300013308 Bacteria 4160
52 Ga0157375_10369050 3300013308 Bacteria 1601
53 Ga0213876_10012096 3300021384 Bacteria 4597
54 Ga0207705_10120661 3300025909 Bacteria 1945
55 Ga0207684_10121673 3300025910 Bacteria 2237
56 Ga0207707_10087729 3300025912 Bacteria 2718
57 Ga0207649_10001068 3300025920 Bacteria 16723
58 Ga0207652_10268852 3300025921 Unclassified 1538
59 Ga0207646_10274173 3300025922 Bacteria 1525
60 Ga0207694_10002792 3300025924 Bacteria 14095
61 Ga0207659_10094817 3300025926 Bacteria 2237
62 Ga0207690_10267836 3300025932 Bacteria 1326
63 Ga0207670_10010182 3300025936 Bacteria 5406
64 Ga0207670_10045190 3300025936 Unclassified 2918
65 Ga0207704_10006603 3300025938 Bacteria 5427
66 Ga0207711_10052438 3300025941 Bacteria 3496
67 Ga0207667_10067681 3300025949 Bacteria 3720
68 Ga0207677_10129264 3300026023 Bacteria 1915
69 Ga0207702_10199896 3300026078 Bacteria 1852
70 Ga0207648_10001506 3300026089 Bacteria 25672
71 Ga0268264_10164503 3300028381 Bacteria 2002
72 Ga0265337_1000419 3300028556 Bacteria 22698
73 Ga0265337_1010437 3300028556 Bacteria 3253
74 Ga0265337_1028530 3300028556 Bacteria 1674
75 Ga0265319_1000942 3300028563 Bacteria 18246
76 Ga0265319_1005108 3300028563 Bacteria 6361
77 Ga0265319_1008077 3300028563 Bacteria 4651
78 Ga0265319_1011008 3300028563 Bacteria 3739
79 Ga0265318_10000190 3300028577 Bacteria 54275
80 Ga0265318_10007041 3300028577 Bacteria 5121
81 Ga0265323_10022828 3300028653 Bacteria 2389
82 Ga0265336_10000493 3300028666 Bacteria 23115
83 Ga0307515_10186980 3300028794 Bacteria 1997
84 Ga0265338_10000084 3300028800 Bacteria 175415
85 Ga0265338_10000616 3300028800 Bacteria 62218
86 Ga0265338_10000797 3300028800 Bacteria 53302
87 Ga0265338_10001363 3300028800 Bacteria 39759
88 Ga0265338_10001550 3300028800 Bacteria 37131
89 Ga0265338_10005250 3300028800 Bacteria 16981
90 Ga0265338_10006138 3300028800 Bacteria 15421
91 Ga0265338_10024562 3300028800 Bacteria 6152
92 Ga0265330_10019714 3300031235 Bacteria 3087
93 Ga0265320_10000551 3300031240 Bacteria 28889
94 Ga0265320_10001553 3300031240 Bacteria 16580
95 Ga0265320_10010357 3300031240 Bacteria 5557
96 Ga0265320_10023026 3300031240 Bacteria 3323
97 Ga0265320_10044923 3300031240 Bacteria 2173
98 Ga0265340_10010680 3300031247 Bacteria 4907
99 Ga0265327_10000769 3300031251 Bacteria 49436
100 Ga0265327_10005090 3300031251 Bacteria 11190
101 Ga0265327_10011313 3300031251 Bacteria 6164
102 Ga0265327_10061375 3300031251 Unclassified 1918
103 Ga0265327_10066436 3300031251 Bacteria 1820
104 Ga0307408_100059244 3300031548 Bacteria 2787
105 Ga0265313_10000467 3300031595 Bacteria 42239
106 Ga0265313_10034007 3300031595 Bacteria 2582
107 Ga0265342_10068650 3300031712 Bacteria 2071
108 Ga0307416_100261815 3300032002 Unclassified 1691
109 Ga0307414_10065318 3300032004 Bacteria 2595
110 Ga0307411_10148500 3300032005 Bacteria 1739
111 Ga0373928_0000481 3300035084 Bacteria 7863
112 Ga0373956_0007162 3300035119 Bacteria 4490
113 Ga0373937_0010907 3300036401 Bacteria 7955
114 Ga0373925_0065462 3300037068 Bacteria 2738
115 Ga0395905_0000096 3300037471 Bacteria 146075
116 Ga0436365_1674358 3300039437 Unclassified 1648
117 Ga0453684_0321213 3300044712 Bacteria 1753
118 Ga0451576_0030209 3300045051 Bacteria 5795
119 Ga0451576_0095094 3300045051 Bacteria 3099
120 Ga0451576_0114477 3300045051 Bacteria 2808
121 Ga0451576_0164700 3300045051 Bacteria 2314
122 Ga0451576_0334114 3300045051 Bacteria 1586
123 Ga0451576_0429281 3300045051 Unclassified 1387
124 Ga0466967_0028307 3300045976 Bacteria 4677
125 Ga0495592_0000008 3300046454 Bacteria 175382
126 Ga0495629_0170816 3300046459 Bacteria 1509
127 Ga0495580_0054658 3300046472 Bacteria 2815
128 Ga0495618_0000922 3300046514 Bacteria 20192
129 Ga0495628_0000166 3300046516 Bacteria 57276
130 Ga0495628_0176345 3300046516 Bacteria 1619
131 Ga0495630_0019445 3300046517 Bacteria 4992
132 Ga0495666_0101786 3300046526 Bacteria 1353
133 Ga0495652_0039514 3300046529 Bacteria 4080
134 Ga0495586_0001558 3300046535 Bacteria 12647
135 Ga0495645_0007086 3300046543 Bacteria 7801
136 Ga0495622_0008035 3300046557 Bacteria 4893
137 Ga0495667_0069832 3300046559 Bacteria 2292
138 Ga0495667_0124642 3300046559 Bacteria 1663
139 Ga0495634_0016184 3300046642 Bacteria 5337
140 Ga0495635_0016377 3300046663 Bacteria 5176
141 Ga0495599_0024889 3300046678 Bacteria 3743
142 Ga0495647_0000561 3300046681 Bacteria 10941
143 Ga0495658_0005326 3300046683 Bacteria 6331
144 Ga0495658_0069435 3300046683 Bacteria 2042
145 Ga0495613_0006392 3300046689 Bacteria 8805
146 Ga0495613_0182037 3300046689 Bacteria 1488
147 Ga0495674_0082078 3300047319 Bacteria 2764
148 Ga0495674_0219552 3300047319 Bacteria 1572
149 Ga0495681_0029118 3300047470 Bacteria 2831
150 Ga0495686_0017959 3300047472 Bacteria 4756
151 Ga0495686_0050827 3300047472 Bacteria 2603
152 Ga0501031_0000065 3300049568 Bacteria 56817
153 Ga0501031_0002589 3300049568 Bacteria 11529
154 Ga0501031_0076482 3300049568 Bacteria 2180
155 Ga0501032_0001398 3300049569 Bacteria 19177
156 Ga0501032_0002259 3300049569 Bacteria 15148
157 Ga0501032_0021518 3300049569 Bacteria 4482
158 Ga0501033_0003299 3300049570 Bacteria 13335
159 Ga0501033_0010662 3300049570 Bacteria 7044
160 Ga0501034_0080096 3300049571 Bacteria 3269
161 Ga0501036_0000891 3300049572 Bacteria 22321
162 Ga0501037_0046478 3300049573 Bacteria 3183
163 Ga0501037_0070318 3300049573 Bacteria 2547
164 Ga0501038_0000119 3300049574 Bacteria 67069
165 Ga0501038_0010088 3300049574 Bacteria 8648
166 Ga0501042_0015166 3300049578 Bacteria 5271
167 Ga0501043_0004305 3300049579 Bacteria 11583
168 Ga0501043_0022275 3300049579 Bacteria 4970
169 Ga0501046_0000001 3300049580 Bacteria 609806
170 Ga0501046_0003303 3300049580 Bacteria 14814
171 Ga0501047_0001929 3300049581 Bacteria 19930
172 Ga0501048_0000236 3300049582 Bacteria 36685
173 Ga0501048_0018405 3300049582 Bacteria 5138
174 Ga0501073_0061392 3300049589 Bacteria 2623
175 Ga0501216_000168 3300049660 Bacteria 6961
176 Ga0501227_000045 3300049665 Bacteria 18029
177 Ga0501230_001422 3300049667 Bacteria 2850
178 Ga0501233_000259 3300049668 Bacteria 8085
179 Ga0501221_024816 3300049704 Unclassified 1206
180 Ga0501083_0000001 3300049744 Bacteria 555041
181 Ga0501083_0132495 3300049744 Bacteria 1634
182 Ga0501035_0018302 3300049822 Bacteria 6454
183 Ga0501035_0032193 3300049822 Bacteria 4772
184 Ga0501035_0048104 3300049822 Bacteria 3825
185 Ga0501044_0000350 3300049823 Bacteria 57890
186 Ga0501044_0003697 3300049823 Bacteria 17201
187 Ga0501044_0030747 3300049823 Bacteria 5657
188 Ga0501044_0068341 3300049823 Bacteria 3619
189 Ga0501045_0112790 3300049824 Bacteria 2016
190 nmdc:mga0rr50_218487_c1 3300050513 Bacteria 1573
191 Ga0500559_0001581 3300053136 Bacteria 12719
192 Ga0501084_0083437 3300054114 Bacteria 2682

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300050513 nmdc:mga0rr50_218487_c1 nmdc:mga0rr50_218487_c1_240_1376 339
2 3300049704 Ga0501221_024816 Ga0501221_024816_144_1172 340
3 3300045051 Ga0451576_0429281 Ga0451576_0429281_41_1087 346
4 3300049667 Ga0501230_001422 Ga0501230_001422_158_1261 348
5 3300049668 Ga0501233_000259 Ga0501233_000259_3820_4956 349
6 3300005444 Ga0070694_100068436 Ga0070694_1000684362 351
7 3300005549 Ga0070704_100143212 Ga0070704_1001432122 351
8 3300045051 Ga0451576_0164700 Ga0451576_0164700_1031_2185 351
9 3300003320 rootH2_10034133 rootH2_1003413312 353
10 3300049568 Ga0501031_0002589 Ga0501031_0002589_9066_10208 354
11 3300049569 Ga0501032_0001398 Ga0501032_0001398_4220_5362 354
12 3300049570 Ga0501033_0003299 Ga0501033_0003299_8595_9737 354
13 3300049571 Ga0501034_0080096 Ga0501034_0080096_1363_2505 354
14 3300049572 Ga0501036_0000891 Ga0501036_0000891_552_1694 354
15 3300049574 Ga0501038_0010088 Ga0501038_0010088_4495_5637 354
16 3300049578 Ga0501042_0015166 Ga0501042_0015166_3710_4852 354
17 3300049579 Ga0501043_0022275 Ga0501043_0022275_3451_4593 354
18 3300049580 Ga0501046_0003303 Ga0501046_0003303_2480_3622 354
19 3300049582 Ga0501048_0018405 Ga0501048_0018405_546_1688 354
20 3300049744 Ga0501083_0132495 Ga0501083_0132495_284_1426 354
21 3300049822 Ga0501035_0018302 Ga0501035_0018302_1862_3004 354
22 3300049823 Ga0501044_0068341 Ga0501044_0068341_1764_2906 354
23 3300049824 Ga0501045_0112790 Ga0501045_0112790_603_1745 354
24 3300049574 Ga0501038_0000119 Ga0501038_0000119_56766_57902 358
25 3300049660 Ga0501216_000168 Ga0501216_000168_3310_4446 359
26 3300049665 Ga0501227_000045 Ga0501227_000045_6506_7642 359
27 3300005327 Ga0070658_10057517 Ga0070658_100575173 360
28 3300025922 Ga0207646_10274173 Ga0207646_102741732 360
29 3300046472 Ga0495580_0054658 Ga0495580_0054658_1507_2664 362
30 3300028556 Ga0265337_1010437 Ga0265337_10104372 363
31 3300028800 Ga0265338_10001363 Ga0265338_100013639 363
32 3300031247 Ga0265340_10010680 Ga0265340_100106805 363
33 3300031595 Ga0265313_10034007 Ga0265313_100340071 363
34 3300005339 Ga0070660_100102746 Ga0070660_1001027463 364
35 3300025909 Ga0207705_10120661 Ga0207705_101206612 364
36 3300046526 Ga0495666_0101786 Ga0495666_0101786_16_1161 364
37 3300047472 Ga0495686_0050827 Ga0495686_0050827_523_1884 365
38 3300028563 Ga0265319_1011008 Ga0265319_10110083 366
39 3300028577 Ga0265318_10000190 Ga0265318_1000019045 366
40 3300031240 Ga0265320_10001553 Ga0265320_1000155311 366
41 3300045051 Ga0451576_0114477 Ga0451576_0114477_1377_2558 366
42 3300047472 Ga0495686_0017959 Ga0495686_0017959_117_1403 366
43 3300003323 rootH1_10073915 rootH1_100739152 368
44 3300005471 Ga0070698_100000145 Ga0070698_10000014542 368
45 3300013308 Ga0157375_10369050 Ga0157375_103690502 368
46 3300045051 Ga0451576_0095094 Ga0451576_0095094_695_1825 368
47 3300045976 Ga0466967_0028307 Ga0466967_0028307_1316_2440 368
48 3300005327 Ga0070658_10084141 Ga0070658_100841412 369
49 3300005327 Ga0070658_10180873 Ga0070658_101808732 369
50 3300005366 Ga0070659_100307024 Ga0070659_1003070241 369
51 3300005459 Ga0068867_100001315 Ga0068867_10000131513 369
52 3300006237 Ga0097621_100001766 Ga0097621_1000017664 369
53 3300006358 Ga0068871_100011774 Ga0068871_1000117746 369
54 3300025932 Ga0207690_10267836 Ga0207690_102678361 369
55 3300025938 Ga0207704_10006603 Ga0207704_100066036 369
56 3300026023 Ga0207677_10129264 Ga0207677_101292642 369
57 3300026089 Ga0207648_10001506 Ga0207648_1000150617 369
58 3300028563 Ga0265319_1000942 Ga0265319_10009422 369
59 3300028563 Ga0265319_1005108 Ga0265319_10051086 369
60 3300028563 Ga0265319_1008077 Ga0265319_10080774 369
61 3300028577 Ga0265318_10007041 Ga0265318_100070413 369
62 3300031240 Ga0265320_10010357 Ga0265320_100103575 369
63 3300031595 Ga0265313_10000467 Ga0265313_100004677 369
64 3300031712 Ga0265342_10068650 Ga0265342_100686502 369
65 3300039437 Ga0436365_1674358 Ga0436365_1674358_204_1328 369
66 3300028653 Ga0265323_10022828 Ga0265323_100228282 370
67 3300028794 Ga0307515_10186980 Ga0307515_101869802 371
68 3300031251 Ga0265327_10005090 Ga0265327_100050909 371
69 3300031251 Ga0265327_10061375 Ga0265327_100613751 371
70 3300026078 Ga0207702_10199896 Ga0207702_101998962 372
71 3300032002 Ga0307416_100261815 Ga0307416_1002618152 372
72 3300005289 Ga0065704_10141855 Ga0065704_101418551 373
73 3300005618 Ga0068864_100245049 Ga0068864_1002450491 373
74 3300028800 Ga0265338_10000084 Ga0265338_1000008431 373
75 3300031548 Ga0307408_100059244 Ga0307408_1000592444 373
76 3300032004 Ga0307414_10065318 Ga0307414_100653184 373
77 3300049579 Ga0501043_0004305 Ga0501043_0004305_1217_2374 373
78 3300049580 Ga0501046_0000001 Ga0501046_0000001_173109_174266 373
79 3300049581 Ga0501047_0001929 Ga0501047_0001929_5582_6739 373
80 3300049582 Ga0501048_0000236 Ga0501048_0000236_19095_20252 373
81 3300049589 Ga0501073_0061392 Ga0501073_0061392_514_1662 373
82 3300049744 Ga0501083_0000001 Ga0501083_0000001_116746_117903 373
83 3300049822 Ga0501035_0032193 Ga0501035_0032193_2130_3287 373
84 3300049823 Ga0501044_0030747 Ga0501044_0030747_2649_3806 373
85 3300054114 Ga0501084_0083437 Ga0501084_0083437_469_1626 373
86 3300005340 Ga0070689_100060108 Ga0070689_1000601083 374
87 3300005365 Ga0070688_100011101 Ga0070688_1000111013 374
88 3300005467 Ga0070706_100163140 Ga0070706_1001631402 374
89 3300005617 Ga0068859_100019823 Ga0068859_1000198235 374
90 3300006931 Ga0097620_100019823 Ga0097620_1000198235 374
91 3300009094 Ga0111539_10598316 Ga0111539_105983161 374
92 3300025910 Ga0207684_10121673 Ga0207684_101216731 374
93 3300025936 Ga0207670_10045190 Ga0207670_100451901 374
94 3300031251 Ga0265327_10011313 Ga0265327_100113137 374
95 3300053136 Ga0500559_0001581 Ga0500559_0001581_5245_6393 374
96 3300005340 Ga0070689_100077940 Ga0070689_1000779402 375
97 3300005458 Ga0070681_10094603 Ga0070681_100946033 375
98 3300005843 Ga0068860_100058193 Ga0068860_1000581932 375
99 3300009093 Ga0105240_10223278 Ga0105240_102232781 375
100 3300009094 Ga0111539_10085191 Ga0111539_100851913 375
101 3300009148 Ga0105243_10116452 Ga0105243_101164522 375
102 3300009553 Ga0105249_10082758 Ga0105249_100827583 375
103 3300025912 Ga0207707_10087729 Ga0207707_100877293 375
104 3300025936 Ga0207670_10010182 Ga0207670_100101824 375
105 3300028381 Ga0268264_10164503 Ga0268264_101645031 375
106 3300028800 Ga0265338_10000616 Ga0265338_1000061630 375
107 3300031240 Ga0265320_10000551 Ga0265320_1000055128 375
108 3300031251 Ga0265327_10066436 Ga0265327_100664362 375
109 3300005345 Ga0070692_10136413 Ga0070692_101364131 376
110 3300005539 Ga0068853_100293965 Ga0068853_1002939651 376
111 3300013306 Ga0163162_10279343 Ga0163162_102793432 376
112 3300021384 Ga0213876_10012096 Ga0213876_100120965 376
113 3300025941 Ga0207711_10052438 Ga0207711_100524382 376
114 3300031251 Ga0265327_10000769 Ga0265327_1000076928 376
115 3300037471 Ga0395905_0000096 Ga0395905_0000096_60411_61559 376
116 3300045051 Ga0451576_0030209 Ga0451576_0030209_284_1438 376
117 3300046459 Ga0495629_0170816 Ga0495629_0170816_210_1367 376
118 3300046557 Ga0495622_0008035 Ga0495622_0008035_377_1534 376
119 3300046681 Ga0495647_0000561 Ga0495647_0000561_1262_2419 376
120 3300046683 Ga0495658_0069435 Ga0495658_0069435_560_1717 376
121 3300047470 Ga0495681_0029118 Ga0495681_0029118_998_2155 376
122 3300005365 Ga0070688_100221199 Ga0070688_1002211991 377
123 3300005440 Ga0070705_100190911 Ga0070705_1001909111 377
124 3300005530 Ga0070679_100094687 Ga0070679_1000946873 377
125 3300009093 Ga0105240_10097591 Ga0105240_100975911 377
126 3300009551 Ga0105238_10012552 Ga0105238_100125523 377
127 3300025921 Ga0207652_10268852 Ga0207652_102688522 377
128 3300025924 Ga0207694_10002792 Ga0207694_100027928 377
129 3300035084 Ga0373928_0000481 Ga0373928_0000481_49_1200 377
130 3300044712 Ga0453684_0321213 Ga0453684_0321213_591_1742 377
131 3300045051 Ga0451576_0334114 Ga0451576_0334114_377_1546 377
132 3300046454 Ga0495592_0000008 Ga0495592_0000008_47412_48605 377
133 3300046514 Ga0495618_0000922 Ga0495618_0000922_7851_9044 377
134 3300046516 Ga0495628_0000166 Ga0495628_0000166_21379_22572 377
135 3300046517 Ga0495630_0019445 Ga0495630_0019445_2844_4037 377
136 3300046529 Ga0495652_0039514 Ga0495652_0039514_1928_3121 377
137 3300046535 Ga0495586_0001558 Ga0495586_0001558_6136_7329 377
138 3300046543 Ga0495645_0007086 Ga0495645_0007086_5335_6528 377
139 3300046678 Ga0495599_0024889 Ga0495599_0024889_2082_3275 377
140 3300047319 Ga0495674_0082078 Ga0495674_0082078_29_1222 377
141 3300049569 Ga0501032_0021518 Ga0501032_0021518_2538_3722 377
142 3300002155 JGI24033J26618_1000002 JGI24033J26618_100000224 378
143 3300005340 Ga0070689_100106887 Ga0070689_1001068872 378
144 3300005344 Ga0070661_100000717 Ga0070661_1000007175 378
145 3300005354 Ga0070675_100053126 Ga0070675_1000531262 378
146 3300005456 Ga0070678_100029781 Ga0070678_1000297813 378
147 3300005563 Ga0068855_100081109 Ga0068855_1000811092 378
148 3300005614 Ga0068856_100195257 Ga0068856_1001952572 378
149 3300005614 Ga0068856_100341794 Ga0068856_1003417942 378
150 3300006844 Ga0075428_100323432 Ga0075428_1003234322 378
151 3300009093 Ga0105240_10133634 Ga0105240_101336342 378
152 3300009551 Ga0105238_10005289 Ga0105238_100052896 378
153 3300013104 Ga0157370_10054665 Ga0157370_100546652 378
154 3300013296 Ga0157374_10079015 Ga0157374_100790152 378
155 3300013297 Ga0157378_10004448 Ga0157378_100044484 378
156 3300013308 Ga0157375_10048367 Ga0157375_100483673 378
157 3300025920 Ga0207649_10001068 Ga0207649_100010687 378
158 3300025926 Ga0207659_10094817 Ga0207659_100948172 378
159 3300025949 Ga0207667_10067681 Ga0207667_100676811 378
160 3300028556 Ga0265337_1000419 Ga0265337_10004195 378
161 3300028556 Ga0265337_1028530 Ga0265337_10285301 378
162 3300028666 Ga0265336_10000493 Ga0265336_1000049313 378
163 3300028800 Ga0265338_10000797 Ga0265338_100007973 378
164 3300028800 Ga0265338_10001550 Ga0265338_1000155022 378
165 3300028800 Ga0265338_10005250 Ga0265338_100052504 378
166 3300028800 Ga0265338_10006138 Ga0265338_100061384 378
167 3300028800 Ga0265338_10024562 Ga0265338_100245622 378
168 3300031235 Ga0265330_10019714 Ga0265330_100197142 378
169 3300031240 Ga0265320_10023026 Ga0265320_100230261 378
170 3300031240 Ga0265320_10044923 Ga0265320_100449232 378
171 3300032005 Ga0307411_10148500 Ga0307411_101485001 378
172 3300035119 Ga0373956_0007162 Ga0373956_0007162_541_1698 378
173 3300036401 Ga0373937_0010907 Ga0373937_0010907_6063_7220 378
174 3300037068 Ga0373925_0065462 Ga0373925_0065462_1462_2616 378
175 3300046516 Ga0495628_0176345 Ga0495628_0176345_205_1362 378
176 3300046559 Ga0495667_0069832 Ga0495667_0069832_863_2020 378
177 3300046559 Ga0495667_0124642 Ga0495667_0124642_375_1532 378
178 3300046642 Ga0495634_0016184 Ga0495634_0016184_165_1322 378
179 3300046663 Ga0495635_0016377 Ga0495635_0016377_3597_4754 378
180 3300046683 Ga0495658_0005326 Ga0495658_0005326_807_1967 378
181 3300046689 Ga0495613_0006392 Ga0495613_0006392_3928_5085 378
182 3300046689 Ga0495613_0182037 Ga0495613_0182037_183_1340 378
183 3300047319 Ga0495674_0219552 Ga0495674_0219552_145_1302 378
184 3300049568 Ga0501031_0000065 Ga0501031_0000065_9965_11125 378
185 3300049568 Ga0501031_0076482 Ga0501031_0076482_49_1236 378
186 3300049569 Ga0501032_0002259 Ga0501032_0002259_933_2093 378
187 3300049570 Ga0501033_0010662 Ga0501033_0010662_5804_6964 378
188 3300049573 Ga0501037_0046478 Ga0501037_0046478_1806_2993 378
189 3300049573 Ga0501037_0070318 Ga0501037_0070318_180_1340 378
190 3300049822 Ga0501035_0048104 Ga0501035_0048104_735_1922 378
191 3300049823 Ga0501044_0000350 Ga0501044_0000350_24063_25223 378
192 3300049823 Ga0501044_0003697 Ga0501044_0003697_3748_4935 378

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13458

Peripla_BP_6

Periplasmic binding protein

65

406

0.96

PF01094

ANF_receptor

Receptor family ligand binding region

84

408

0.86

PF13433

Peripla_BP_5

Periplasmic binding protein domain

66

414

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
3td9-assembly1.cif.gz_A-2 crystal structure of a leucine binding protein livk (tm1135) from thermotoga maritima msb8 at 1.90 a resolution 0.9575 31 378
4gnr-assembly1.cif.gz_A 1.0 angstrom resolution crystal structure of the branched-chain amino acid transporter substrate binding protein livj from streptococcus pneumoniae str. canada mdr_19a in complex with isoleucine 0.9486 29 378
4gnr-assembly1.cif.gz_A 1.0 angstrom resolution crystal structure of the branched-chain amino acid transporter substrate binding protein livj from streptococcus pneumoniae str. canada mdr_19a in complex with isoleucine 0.946 29 378
3td9-assembly1.cif.gz_A-2 crystal structure of a leucine binding protein livk (tm1135) from thermotoga maritima msb8 at 1.90 a resolution 0.9442 31 378
4oat-assembly1.cif.gz_A the crystal structure of a solute-binding protein (n280d mutant) from anabaena variabilis atcc 29413 in complex with isoleucine. 0.9274 29 374
ID Description Score Start End Superfamily
3td9A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9635 150 274 3.40.50.2300
4gnrA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9568 150 274 3.40.50.2300
4gnrA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9507 29 358 3.40.50.2300
3hutA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9505 149 282 3.40.50.2300
1usiA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9426 150 274 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A4Q3AHA2-F1-model_v4 Ethanolamine utilization protein EutJ 0.9814 229 378
AF-A0A401TVV8-F1-model_v4 Leucine-binding protein domain-containing protein 0.9761 28 129 GO:0006865
AF-A0A7X6JV89-F1-model_v4 deleted 0.9742 55 378
AF-A0A0C1RST7-F1-model_v4 Leucine-binding protein domain-containing protein 0.9702 184 378
AF-A0A1W9TGW5-F1-model_v4 Leucine-binding protein domain-containing protein 0.9629 22 378 GO:0006865
GO:0016020

Feature Viewer

pLDDT pTM Quality
91.42 0.88 High
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Predicted Structure (AlphaFold2)

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