F290185
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 188 | 153 | 142 | 237 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2935409751|2935411855 |
| Length | 263 |
| Sequence | AETSARAVGAPRTARDARALRTAERTGAELHLDGLTAGYGGAPVLRGVDVRVPAGTILALLGANGAGKTTLLRSVSGLMPAASGRIVFDGVDLAEVSVEDRARAGLAQVPEGRSVVAELTVDENLRLGGLQRFRGRRLTAAVDGIYDLFEPLVRRRRAAGHQLSGGERQMLALGRAIIAEPRVLLLDEPSLGLAPRVVAQIMAVLRTLRDERGLTVLLAEQNVTSALAVADHGVVLNLGEVVADRPAEDLRTDSALRHAYLGF |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2513237085 | Rhizobium leguminosarum bv. viciae UPM1137 | Isolate | Nodule |
| 2 | 2519899620 | Rhizobium sp. Pop5 | Isolate | Nodule |
| 3 | 2643221572 | Leifsonia sp. Root60 | Isolate | Unclassified |
| 4 | 2643221669 | Leifsonia sp. Root1293 | Isolate | Unclassified |
| 5 | 2643221690 | Cellulomonas sp. Root485 | Isolate | Unclassified |
| 6 | 2643221694 | Cellulomonas sp. Root137 | Isolate | Unclassified |
| 7 | 2643221722 | Cellulomonas sp. Root930 | Isolate | Unclassified |
| 8 | 2657244999 | Sinorhizobium sojae CCBAU 05684 | Isolate | Unclassified |
| 9 | 2721755702 | Agromyces sp. AR33 | Isolate | Rhizosphere |
| 10 | 2772190715 | Micromonospora chokoriensis NRRL B-24750 | Isolate | Unclassified |
| 11 | 2791355261 | Rhizobium sp. J15 | Isolate | Nodule |
| 12 | 2791355263 | Rhizobium chutanense C5 | Isolate | Nodule |
| 13 | 2802429268 | Sinorhizobium sojae CCBAU 05684 | Isolate | Unclassified |
| 14 | 2838061910 | Rhizobium phaseoli L15 | Isolate | Nodule |
| 15 | 2842264693 | Rhizobium phaseoli SEMIA 487 | Isolate | Nodule |
| 16 | 2842428310 | Rhizobium phaseoli SEMIA 4050 | Isolate | Nodule |
| 17 | 2842434925 | Rhizobium esperanzae SEMIA 4051 | Isolate | Nodule |
| 18 | 2842441272 | Rhizobium esperanzae SEMIA 4053 | Isolate | Nodule |
| 19 | 2842469257 | Rhizobium phaseoli SEMIA 4058 | Isolate | Nodule |
| 20 | 2855670206 | Micromonospora noduli Lupac 07 | Isolate | Nodule |
| 21 | 2855676851 | Micromonospora saelicesensis GAR05 | Isolate | Unclassified |
| 22 | 2857288857 | Micromonospora noduli ONO23 | Isolate | Unclassified |
| 23 | 2858848962 | Micromonospora saelicesensis GAR06 | Isolate | Unclassified |
| 24 | 2858882152 | Micromonospora noduli MED15 | Isolate | Nodule |
| 25 | 2858888857 | Micromonospora saelicesensis Lupac 06 | Isolate | Unclassified |
| 26 | 2858895516 | Micromonospora saelicesensis PSN13 | Isolate | Unclassified |
| 27 | 2869048445 | Micromonospora saelicesensis PSN01 | Isolate | Unclassified |
| 28 | 2869061728 | Micromonospora noduli ONO86 | Isolate | Unclassified |
| 29 | 2869068681 | Micromonospora noduli GUI43 | Isolate | Unclassified |
| 30 | 2880489317 | Micromonospora ureilytica DSM 101692 | Isolate | Unclassified |
| 31 | 2880495981 | Micromonospora vinacea DSM 101695 | Isolate | Unclassified |
| 32 | 2887478801 | Catellatospora paridis NEAU-CL2 | Isolate | Rhizosphere |
| 33 | 2895660088 | Leifsonia flava SYP-B2174 | Isolate | Rhizosphere |
| 34 | 2929226422 | Micromonospora sp. R-74116 Hybrid assembly | Isolate | Unclassified |
| 35 | 2935409751 | Agromyces sp. PvR057 | Isolate | Rhizosphere |
| 36 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 37 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 38 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 39 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 40 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 41 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 42 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 43 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 44 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 45 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 46 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 47 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 48 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 49 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 50 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 51 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 52 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 53 | 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Metagenome | Rhizosphere |
| 54 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 55 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 56 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 57 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 58 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 59 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 63 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 64 | 3300013250 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 | Metagenome | Rhizosphere |
| 65 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 66 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 67 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 68 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 69 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 70 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 71 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300027462 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 90 | 3300030522 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM | Metagenome | Unclassified |
| 91 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 92 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 93 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 94 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 95 | 3300031838 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM | Metagenome | Unclassified |
| 96 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 97 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 98 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 99 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 100 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 101 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 102 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 103 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 104 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 105 | 3300034818 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 | Metagenome | Rhizosphere |
| 106 | 3300035088 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 | Metagenome | Rhizosphere |
| 107 | 3300035091 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 | Metagenome | Rhizosphere |
| 108 | 3300035115 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 | Metagenome | Rhizosphere |
| 109 | 3300035207 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 | Metagenome | Rhizosphere |
| 110 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 111 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 112 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 113 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 114 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 115 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 116 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 117 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 118 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 119 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 120 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 121 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 122 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 123 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 131 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 132 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 133 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 134 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 135 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 136 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 137 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 138 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 139 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 140 | 3300053109 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere | Metagenome | Endosphere |
| 141 | 3300053118 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere | Metagenome | Endosphere |
| 142 | 3300053159 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere | Metagenome | Endosphere |
| 143 | 8001781756 | Catellatospora tritici NEAU-YM18 | Isolate | Rhizosphere |
| 144 | 8003314358 | Amycolatopsis sp. MtRt-6 | Isolate | Unclassified |
| 145 | 8003830390 | Micromonospora parastrephiae STR1_7 | Isolate | Rhizosphere |
| 146 | 8003870546 | Micromonospora tarensis STR1s_6 | Isolate | Rhizosphere |
| 147 | 8005430974 | Rhizobium phaseoli Y20 | Isolate | Nodule |
| 148 | 8005626139 | Rhizobium phaseoli Y18 | Isolate | Nodule |
| 149 | 8045830549 | Microbacterium yannicii DSM 23203 | Isolate | Unclassified |
| 150 | 8046352972 | Agromyces mangrovi NBRC 112812 | Isolate | Rhizosphere |
| 151 | 8054704163 | Micromonospora trifolii NIE79 | Isolate | Nodule |
| 152 | 8054727385 | Micromonospora alfalfae MED01 | Isolate | Nodule |
| 153 | 8054734606 | Micromonospora hortensis NIE111 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 75 |
| Metatranscriptomes | 0.53 |
| Isolates | 24.47 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 2.13 |
| Nodule | 9.04 |
| Rhizoplane | 3.19 |
| Rhizosphere | 69.15 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 16.49 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070683_100067753 | 3300005329 | Bacteria | 3325 |
| 2 | Ga0070683_100103796 | 3300005329 | Bacteria | 2679 |
| 3 | Ga0070668_100028221 | 3300005347 | Bacteria | 4261 |
| 4 | Ga0070709_10029886 | 3300005434 | Bacteria | 3264 |
| 5 | Ga0070713_100705666 | 3300005436 | Bacteria | 963 |
| 6 | Ga0070708_100000047 | 3300005445 | Bacteria | 80385 |
| 7 | Ga0070708_100803062 | 3300005445 | Bacteria | 884 |
| 8 | Ga0070706_100001107 | 3300005467 | Bacteria | 29199 |
| 9 | Ga0070706_100005590 | 3300005467 | Bacteria | 11958 |
| 10 | Ga0070706_100476485 | 3300005467 | Bacteria | 1161 |
| 11 | Ga0070707_100000094 | 3300005468 | Bacteria | 80385 |
| 12 | Ga0070707_100543749 | 3300005468 | Bacteria | 1123 |
| 13 | Ga0070698_100027120 | 3300005471 | Bacteria | 5957 |
| 14 | Ga0070698_100242987 | 3300005471 | Bacteria | 1733 |
| 15 | Ga0070699_100003386 | 3300005518 | Bacteria | 14106 |
| 16 | Ga0070699_100040642 | 3300005518 | Bacteria | 4026 |
| 17 | Ga0070679_100364669 | 3300005530 | Bacteria | 1392 |
| 18 | Ga0070679_100436830 | 3300005530 | Bacteria | 1254 |
| 19 | Ga0070684_100264066 | 3300005535 | Bacteria | 1575 |
| 20 | Ga0070697_100001153 | 3300005536 | Bacteria | 20035 |
| 21 | Ga0070697_100192506 | 3300005536 | Bacteria | 1731 |
| 22 | Ga0070704_100003748 | 3300005549 | Bacteria | 8749 |
| 23 | Ga0068857_100299626 | 3300005577 | Bacteria | 1482 |
| 24 | Ga0068856_100182717 | 3300005614 | Bacteria | 2111 |
| 25 | Ga0068859_100707485 | 3300005617 | Bacteria | 1098 |
| 26 | Ga0068864_100023325 | 3300005618 | Bacteria | 5195 |
| 27 | Ga0068870_10305248 | 3300005840 | Bacteria | 1006 |
| 28 | Ga0068863_100032810 | 3300005841 | Bacteria | 4947 |
| 29 | Ga0081540_1009223 | 3300005983 | Bacteria | 6804 |
| 30 | Ga0070717_10172941 | 3300006028 | Bacteria | 1879 |
| 31 | Ga0070716_100018616 | 3300006173 | Bacteria | 3620 |
| 32 | Ga0075428_100241846 | 3300006844 | Bacteria | 1947 |
| 33 | Ga0097620_100707439 | 3300006931 | Bacteria | 1098 |
| 34 | Ga0111539_10031184 | 3300009094 | Bacteria | 6479 |
| 35 | Ga0114129_10000004 | 3300009147 | Bacteria | 160944 |
| 36 | Ga0114129_10008222 | 3300009147 | Bacteria | 14875 |
| 37 | Ga0105242_11091187 | 3300009176 | Bacteria | 812 |
| 38 | Ga0105248_10036653 | 3300009177 | Bacteria | 5486 |
| 39 | Ga0171462_1001 | 3300013250 | Bacteria | 1135406 |
| 40 | Ga0157372_10090973 | 3300013307 | Bacteria | 3470 |
| 41 | Ga0157375_10755631 | 3300013308 | Bacteria | 1123 |
| 42 | Ga0163163_10161096 | 3300014325 | Bacteria | 2289 |
| 43 | Ga0157376_10841520 | 3300014969 | Bacteria | 932 |
| 44 | Ga0206353_10936676 | 3300020082 | Bacteria | 2225 |
| 45 | Ga0209025_1039752 | 3300025294 | Bacteria | 2047 |
| 46 | Ga0207692_10030547 | 3300025898 | Bacteria | 2570 |
| 47 | Ga0207699_10032898 | 3300025906 | Bacteria | 2925 |
| 48 | Ga0207684_10000246 | 3300025910 | Bacteria | 81541 |
| 49 | Ga0207684_10000304 | 3300025910 | Bacteria | 69992 |
| 50 | Ga0207684_10037702 | 3300025910 | Bacteria | 4102 |
| 51 | Ga0207684_10272001 | 3300025910 | Bacteria | 1462 |
| 52 | Ga0207707_10541354 | 3300025912 | Bacteria | 990 |
| 53 | Ga0207693_10026639 | 3300025915 | Bacteria | 4574 |
| 54 | Ga0207652_10137914 | 3300025921 | Bacteria | 2179 |
| 55 | Ga0207652_10144170 | 3300025921 | Bacteria | 2131 |
| 56 | Ga0207646_10000204 | 3300025922 | Bacteria | 80399 |
| 57 | Ga0207646_10006954 | 3300025922 | Bacteria | 11601 |
| 58 | Ga0207665_10087516 | 3300025939 | Bacteria | 2153 |
| 59 | Ga0207711_10054766 | 3300025941 | Bacteria | 3424 |
| 60 | Ga0207711_10443990 | 3300025941 | Bacteria | 1207 |
| 61 | Ga0207661_10066818 | 3300025944 | Bacteria | 2922 |
| 62 | Ga0207661_10096649 | 3300025944 | Bacteria | 2472 |
| 63 | Ga0207679_10293385 | 3300025945 | Bacteria | 1399 |
| 64 | Ga0207668_10001283 | 3300025972 | Bacteria | 14967 |
| 65 | Ga0207678_10000192 | 3300026067 | Bacteria | 52866 |
| 66 | Ga0207702_10157151 | 3300026078 | Bacteria | 2073 |
| 67 | Ga0207702_10724511 | 3300026078 | Bacteria | 981 |
| 68 | Ga0207641_10016628 | 3300026088 | Bacteria | 6023 |
| 69 | Ga0207676_10061464 | 3300026095 | Bacteria | 2974 |
| 70 | Ga0210000_1005503 | 3300027462 | Bacteria | 1837 |
| 71 | Ga0268266_10198957 | 3300028379 | Bacteria | 1833 |
| 72 | Ga0307515_10002732 | 3300028794 | Bacteria | 37745 |
| 73 | Ga0307515_10090301 | 3300028794 | Bacteria | 3844 |
| 74 | Ga0307512_10019452 | 3300030522 | Bacteria | 6178 |
| 75 | Ga0307513_10078561 | 3300031456 | Bacteria | 3413 |
| 76 | Ga0307508_10002502 | 3300031616 | Bacteria | 19362 |
| 77 | Ga0307405_10166194 | 3300031731 | Bacteria | 1569 |
| 78 | Ga0307405_10207608 | 3300031731 | Bacteria | 1427 |
| 79 | Ga0307413_10049580 | 3300031824 | Bacteria | 2517 |
| 80 | Ga0307413_10127132 | 3300031824 | Bacteria | 1738 |
| 81 | Ga0307518_10223393 | 3300031838 | Bacteria | 1227 |
| 82 | Ga0307410_10026172 | 3300031852 | Bacteria | 3669 |
| 83 | Ga0307410_10068772 | 3300031852 | Bacteria | 2447 |
| 84 | Ga0307410_10172863 | 3300031852 | Bacteria | 1629 |
| 85 | Ga0307406_10098264 | 3300031901 | Bacteria | 1987 |
| 86 | Ga0307406_10106198 | 3300031901 | Bacteria | 1923 |
| 87 | Ga0307407_10011599 | 3300031903 | Bacteria | 4203 |
| 88 | Ga0307407_10095530 | 3300031903 | Bacteria | 1833 |
| 89 | Ga0307412_10051509 | 3300031911 | Bacteria | 2721 |
| 90 | Ga0307412_10206785 | 3300031911 | Bacteria | 1495 |
| 91 | Ga0307409_100014011 | 3300031995 | Bacteria | 5192 |
| 92 | Ga0307409_100084214 | 3300031995 | Bacteria | 2581 |
| 93 | Ga0307409_100141940 | 3300031995 | Bacteria | 2071 |
| 94 | Ga0307416_100046203 | 3300032002 | Bacteria | 3435 |
| 95 | Ga0307416_100667963 | 3300032002 | Bacteria | 1125 |
| 96 | Ga0307411_10207603 | 3300032005 | Bacteria | 1510 |
| 97 | Ga0307415_100182030 | 3300032126 | Bacteria | 1650 |
| 98 | Ga0307507_10129982 | 3300033179 | Bacteria | 1975 |
| 99 | Ga0373950_0026892 | 3300034818 | Bacteria | 1046 |
| 100 | Ga0373940_0035023 | 3300035088 | Bacteria | 1357 |
| 101 | Ga0373951_0000305 | 3300035091 | Bacteria | 15567 |
| 102 | Ga0373941_0006542 | 3300035115 | Bacteria | 2813 |
| 103 | Ga0373942_0001766 | 3300035207 | Bacteria | 5473 |
| 104 | Ga0373935_0013934 | 3300035692 | Bacteria | 4854 |
| 105 | Ga0395900_0397871 | 3300037418 | Bacteria | 1342 |
| 106 | Ga0395905_0013693 | 3300037471 | Bacteria | 7769 |
| 107 | Ga0395901_0035892 | 3300038443 | Bacteria | 5123 |
| 108 | Ga0436365_1709036 | 3300039437 | Bacteria | 6644 |
| 109 | Ga0466965_0001045 | 3300044683 | Bacteria | 10742 |
| 110 | Ga0466966_0254969 | 3300044684 | Bacteria | 1057 |
| 111 | Ga0466961_0226531 | 3300044693 | Bacteria | 1151 |
| 112 | Ga0466961_0274892 | 3300044693 | Bacteria | 1032 |
| 113 | Ga0466963_0212727 | 3300044694 | Bacteria | 1353 |
| 114 | Ga0466970_0003636 | 3300044765 | Bacteria | 7520 |
| 115 | Ga0466970_0022877 | 3300044765 | Bacteria | 3261 |
| 116 | Ga0466957_0017520 | 3300044842 | Bacteria | 4197 |
| 117 | Ga0466960_0002265 | 3300044901 | Bacteria | 7195 |
| 118 | Ga0466967_0228146 | 3300045976 | Bacteria | 1772 |
| 119 | Ga0495638_0024826 | 3300046460 | Bacteria | 3902 |
| 120 | Ga0495638_0213603 | 3300046460 | Bacteria | 1082 |
| 121 | Ga0495630_0000965 | 3300046517 | Bacteria | 20112 |
| 122 | Ga0495632_0033018 | 3300046519 | Bacteria | 2661 |
| 123 | Ga0495668_0000173 | 3300046616 | Bacteria | 95830 |
| 124 | Ga0495625_0001016 | 3300046660 | Bacteria | 37004 |
| 125 | Ga0495683_0090202 | 3300047323 | Bacteria | 1486 |
| 126 | Ga0495626_0000642 | 3300048091 | Bacteria | 33724 |
| 127 | Ga0496105_0049543 | 3300048908 | Bacteria | 3468 |
| 128 | Ga0496108_0000220 | 3300048911 | Bacteria | 51907 |
| 129 | Ga0496108_0069608 | 3300048911 | Bacteria | 2969 |
| 130 | Ga0496112_0143054 | 3300048915 | Bacteria | 2360 |
| 131 | Ga0496112_0474207 | 3300048915 | Bacteria | 1188 |
| 132 | Ga0496113_0002002 | 3300048916 | Bacteria | 11677 |
| 133 | Ga0496119_0005331 | 3300048922 | Bacteria | 12371 |
| 134 | Ga0496126_0226003 | 3300048929 | Bacteria | 1570 |
| 135 | Ga0501034_0014673 | 3300049571 | Bacteria | 8066 |
| 136 | nmdc:mga05p37_34314_c1 | 3300050507 | Bacteria | 6214 |
| 137 | nmdc:mga05p37_4281_c1 | 3300050507 | Bacteria | 16670 |
| 138 | nmdc:mga09592_6259_c1 | 3300050508 | Bacteria | 9694 |
| 139 | nmdc:mga0a205_67830_c1 | 3300050515 | Bacteria | 2218 |
| 140 | Ga0500569_061920 | 3300053109 | Bacteria | 1157 |
| 141 | Ga0500594_0006537 | 3300053118 | Bacteria | 2623 |
| 142 | Ga0500630_067895 | 3300053159 | Bacteria | 1692 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300005445 | Ga0070708_100000047 | Ga0070708_1000000478 | 216 |
| 2 | 3300005467 | Ga0070706_100001107 | Ga0070706_1000011078 | 216 |
| 3 | 3300005468 | Ga0070707_100000094 | Ga0070707_1000000948 | 216 |
| 4 | 3300005518 | Ga0070699_100003386 | Ga0070699_1000033865 | 216 |
| 5 | 3300005549 | Ga0070704_100003748 | Ga0070704_1000037486 | 216 |
| 6 | 3300025910 | Ga0207684_10000246 | Ga0207684_1000024682 | 216 |
| 7 | 3300025922 | Ga0207646_10000204 | Ga0207646_100002048 | 216 |
| 8 | 3300046517 | Ga0495630_0000965 | Ga0495630_0000965_4683_5396 | 216 |
| 9 | 3300006028 | Ga0070717_10172941 | Ga0070717_101729413 | 219 |
| 10 | 3300005536 | Ga0070697_100001153 | Ga0070697_10000115321 | 220 |
| 11 | 3300028794 | Ga0307515_10002732 | Ga0307515_100027327 | 226 |
| 12 | 3300028794 | Ga0307515_10090301 | Ga0307515_100903013 | 226 |
| 13 | 3300030522 | Ga0307512_10019452 | Ga0307512_100194525 | 226 |
| 14 | 3300031616 | Ga0307508_10002502 | Ga0307508_1000250214 | 226 |
| 15 | 3300044693 | Ga0466961_0274892 | Ga0466961_0274892_227_934 | 226 |
| 16 | 3300046460 | Ga0495638_0213603 | Ga0495638_0213603_328_1017 | 226 |
| 17 | 3300046519 | Ga0495632_0033018 | Ga0495632_0033018_1667_2356 | 226 |
| 18 | 3300053109 | Ga0500569_061920 | Ga0500569_061920_285_974 | 226 |
| 19 | 3300053118 | Ga0500594_0006537 | Ga0500594_0006537_393_1082 | 226 |
| 20 | 3300025945 | Ga0207679_10293385 | Ga0207679_102933851 | 230 |
| 21 | iso_pu_bacteria | 2513237085 | 2513574428 | 230 |
| 22 | iso_pu_bacteria | 2519899620 | 2520381104 | 230 |
| 23 | iso_pu_bacteria | 2657244999 | 2657684727 | 230 |
| 24 | iso_pu_bacteria | 2791355261 | 2793331572 | 230 |
| 25 | iso_pu_bacteria | 2791355263 | 2793344659 | 230 |
| 26 | iso_pu_bacteria | 2802429268 | 2804755871 | 230 |
| 27 | iso_pu_bacteria | 2838061910 | 2838064553 | 230 |
| 28 | iso_pu_bacteria | 2842264693 | 2842270049 | 230 |
| 29 | iso_pu_bacteria | 2842428310 | 2842433882 | 230 |
| 30 | iso_pu_bacteria | 2842434925 | 2842440258 | 230 |
| 31 | iso_pu_bacteria | 2842441272 | 2842446953 | 230 |
| 32 | iso_pu_bacteria | 2842469257 | 2842474808 | 230 |
| 33 | iso_pu_bacteria | 8005430974 | 8005434924 | 230 |
| 34 | iso_pu_bacteria | 8005626139 | 8005628966 | 230 |
| 35 | 3300005347 | Ga0070668_100028221 | Ga0070668_1000282212 | 231 |
| 36 | 3300005436 | Ga0070713_100705666 | Ga0070713_1007056662 | 231 |
| 37 | 3300005467 | Ga0070706_100476485 | Ga0070706_1004764851 | 231 |
| 38 | 3300005530 | Ga0070679_100436830 | Ga0070679_1004368302 | 231 |
| 39 | 3300005983 | Ga0081540_1009223 | Ga0081540_10092237 | 231 |
| 40 | 3300009094 | Ga0111539_10031184 | Ga0111539_100311845 | 231 |
| 41 | 3300009176 | Ga0105242_11091187 | Ga0105242_110911871 | 231 |
| 42 | 3300014969 | Ga0157376_10841520 | Ga0157376_108415201 | 231 |
| 43 | 3300025898 | Ga0207692_10030547 | Ga0207692_100305473 | 231 |
| 44 | 3300025972 | Ga0207668_10001283 | Ga0207668_100012834 | 231 |
| 45 | 3300028379 | Ga0268266_10198957 | Ga0268266_101989572 | 231 |
| 46 | 3300034818 | Ga0373950_0026892 | Ga0373950_0026892_318_1025 | 231 |
| 47 | 3300035088 | Ga0373940_0035023 | Ga0373940_0035023_435_1142 | 231 |
| 48 | 3300035115 | Ga0373941_0006542 | Ga0373941_0006542_1752_2459 | 231 |
| 49 | 3300035207 | Ga0373942_0001766 | Ga0373942_0001766_2159_2866 | 231 |
| 50 | 3300035692 | Ga0373935_0013934 | Ga0373935_0013934_25_729 | 231 |
| 51 | 3300048911 | Ga0496108_0000220 | Ga0496108_0000220_44753_45457 | 231 |
| 52 | 3300053159 | Ga0500630_067895 | Ga0500630_067895_507_1211 | 231 |
| 53 | iso_pu_bacteria | 8003314358 | 8003316679 | 231 |
| 54 | 3300039437 | Ga0436365_1709036 | Ga0436365_1709036_2974_3672 | 232 |
| 55 | 3300050515 | nmdc:mga0a205_67830_c1 | nmdc:mga0a205_67830_c1_923_1636 | 232 |
| 56 | iso_pu_bacteria | 2643221690 | 2644502968 | 232 |
| 57 | iso_pu_bacteria | 2643221694 | 2644525307 | 232 |
| 58 | iso_pu_bacteria | 2643221722 | 2644669392 | 232 |
| 59 | 3300013308 | Ga0157375_10755631 | Ga0157375_107556312 | 233 |
| 60 | 3300027462 | Ga0210000_1005503 | Ga0210000_10055033 | 233 |
| 61 | 3300031824 | Ga0307413_10049580 | Ga0307413_100495803 | 233 |
| 62 | 3300031824 | Ga0307413_10127132 | Ga0307413_101271322 | 233 |
| 63 | 3300031852 | Ga0307410_10026172 | Ga0307410_100261722 | 233 |
| 64 | 3300031852 | Ga0307410_10068772 | Ga0307410_100687723 | 233 |
| 65 | 3300031903 | Ga0307407_10095530 | Ga0307407_100955302 | 233 |
| 66 | 3300031995 | Ga0307409_100084214 | Ga0307409_1000842142 | 233 |
| 67 | 3300031995 | Ga0307409_100141940 | Ga0307409_1001419402 | 233 |
| 68 | 3300032002 | Ga0307416_100046203 | Ga0307416_1000462033 | 233 |
| 69 | 3300032005 | Ga0307411_10207603 | Ga0307411_102076032 | 233 |
| 70 | 3300025294 | Ga0209025_1039752 | Ga0209025_10397522 | 234 |
| 71 | 3300046460 | Ga0495638_0024826 | Ga0495638_0024826_2032_2754 | 234 |
| 72 | 3300049571 | Ga0501034_0014673 | Ga0501034_0014673_6378_7085 | 234 |
| 73 | iso_pu_bacteria | 2643221572 | 2643876649 | 234 |
| 74 | iso_pu_bacteria | 2643221669 | 2644383704 | 234 |
| 75 | iso_pu_bacteria | 2895660088 | 2895660866 | 234 |
| 76 | iso_pu_bacteria | 8001781756 | 8001785444 | 234 |
| 77 | 3300005329 | Ga0070683_100067753 | Ga0070683_1000677534 | 235 |
| 78 | 3300005329 | Ga0070683_100103796 | Ga0070683_1001037963 | 235 |
| 79 | 3300005434 | Ga0070709_10029886 | Ga0070709_100298863 | 235 |
| 80 | 3300005445 | Ga0070708_100803062 | Ga0070708_1008030622 | 235 |
| 81 | 3300005467 | Ga0070706_100005590 | Ga0070706_1000055904 | 235 |
| 82 | 3300005468 | Ga0070707_100543749 | Ga0070707_1005437492 | 235 |
| 83 | 3300005471 | Ga0070698_100027120 | Ga0070698_1000271203 | 235 |
| 84 | 3300005471 | Ga0070698_100242987 | Ga0070698_1002429872 | 235 |
| 85 | 3300005518 | Ga0070699_100040642 | Ga0070699_1000406425 | 235 |
| 86 | 3300005530 | Ga0070679_100364669 | Ga0070679_1003646691 | 235 |
| 87 | 3300005535 | Ga0070684_100264066 | Ga0070684_1002640662 | 235 |
| 88 | 3300005536 | Ga0070697_100192506 | Ga0070697_1001925063 | 235 |
| 89 | 3300005577 | Ga0068857_100299626 | Ga0068857_1002996261 | 235 |
| 90 | 3300005614 | Ga0068856_100182717 | Ga0068856_1001827172 | 235 |
| 91 | 3300005617 | Ga0068859_100707485 | Ga0068859_1007074852 | 235 |
| 92 | 3300005618 | Ga0068864_100023325 | Ga0068864_1000233254 | 235 |
| 93 | 3300005840 | Ga0068870_10305248 | Ga0068870_103052482 | 235 |
| 94 | 3300005841 | Ga0068863_100032810 | Ga0068863_1000328103 | 235 |
| 95 | 3300006173 | Ga0070716_100018616 | Ga0070716_1000186164 | 235 |
| 96 | 3300006844 | Ga0075428_100241846 | Ga0075428_1002418462 | 235 |
| 97 | 3300006931 | Ga0097620_100707439 | Ga0097620_1007074392 | 235 |
| 98 | 3300009147 | Ga0114129_10000004 | Ga0114129_1000000418 | 235 |
| 99 | 3300009147 | Ga0114129_10008222 | Ga0114129_1000822211 | 235 |
| 100 | 3300009177 | Ga0105248_10036653 | Ga0105248_100366533 | 235 |
| 101 | 3300013250 | Ga0171462_1001 | Ga0171462_1001539 | 235 |
| 102 | 3300013307 | Ga0157372_10090973 | Ga0157372_100909732 | 235 |
| 103 | 3300014325 | Ga0163163_10161096 | Ga0163163_101610963 | 235 |
| 104 | 3300020082 | Ga0206353_10936676 | Ga0206353_109366762 | 235 |
| 105 | 3300025906 | Ga0207699_10032898 | Ga0207699_100328983 | 235 |
| 106 | 3300025910 | Ga0207684_10000304 | Ga0207684_1000030419 | 235 |
| 107 | 3300025910 | Ga0207684_10037702 | Ga0207684_100377022 | 235 |
| 108 | 3300025910 | Ga0207684_10272001 | Ga0207684_102720012 | 235 |
| 109 | 3300025912 | Ga0207707_10541354 | Ga0207707_105413542 | 235 |
| 110 | 3300025915 | Ga0207693_10026639 | Ga0207693_100266393 | 235 |
| 111 | 3300025921 | Ga0207652_10137914 | Ga0207652_101379142 | 235 |
| 112 | 3300025921 | Ga0207652_10144170 | Ga0207652_101441702 | 235 |
| 113 | 3300025922 | Ga0207646_10006954 | Ga0207646_100069544 | 235 |
| 114 | 3300025939 | Ga0207665_10087516 | Ga0207665_100875162 | 235 |
| 115 | 3300025941 | Ga0207711_10054766 | Ga0207711_100547663 | 235 |
| 116 | 3300025941 | Ga0207711_10443990 | Ga0207711_104439902 | 235 |
| 117 | 3300025944 | Ga0207661_10066818 | Ga0207661_100668183 | 235 |
| 118 | 3300025944 | Ga0207661_10096649 | Ga0207661_100966492 | 235 |
| 119 | 3300026067 | Ga0207678_10000192 | Ga0207678_1000019222 | 235 |
| 120 | 3300026078 | Ga0207702_10157151 | Ga0207702_101571512 | 235 |
| 121 | 3300026078 | Ga0207702_10724511 | Ga0207702_107245112 | 235 |
| 122 | 3300026088 | Ga0207641_10016628 | Ga0207641_100166284 | 235 |
| 123 | 3300026095 | Ga0207676_10061464 | Ga0207676_100614643 | 235 |
| 124 | 3300031456 | Ga0307513_10078561 | Ga0307513_100785612 | 235 |
| 125 | 3300031731 | Ga0307405_10166194 | Ga0307405_101661942 | 235 |
| 126 | 3300031731 | Ga0307405_10207608 | Ga0307405_102076082 | 235 |
| 127 | 3300031838 | Ga0307518_10223393 | Ga0307518_102233932 | 235 |
| 128 | 3300031852 | Ga0307410_10172863 | Ga0307410_101728632 | 235 |
| 129 | 3300031901 | Ga0307406_10098264 | Ga0307406_100982643 | 235 |
| 130 | 3300031901 | Ga0307406_10106198 | Ga0307406_101061982 | 235 |
| 131 | 3300031903 | Ga0307407_10011599 | Ga0307407_100115992 | 235 |
| 132 | 3300031911 | Ga0307412_10051509 | Ga0307412_100515093 | 235 |
| 133 | 3300031911 | Ga0307412_10206785 | Ga0307412_102067852 | 235 |
| 134 | 3300031995 | Ga0307409_100014011 | Ga0307409_1000140116 | 235 |
| 135 | 3300032002 | Ga0307416_100667963 | Ga0307416_1006679632 | 235 |
| 136 | 3300032126 | Ga0307415_100182030 | Ga0307415_1001820302 | 235 |
| 137 | 3300033179 | Ga0307507_10129982 | Ga0307507_101299822 | 235 |
| 138 | 3300035091 | Ga0373951_0000305 | Ga0373951_0000305_6754_7470 | 235 |
| 139 | 3300037418 | Ga0395900_0397871 | Ga0395900_0397871_135_851 | 235 |
| 140 | 3300037471 | Ga0395905_0013693 | Ga0395905_0013693_6028_6744 | 235 |
| 141 | 3300038443 | Ga0395901_0035892 | Ga0395901_0035892_1863_2579 | 235 |
| 142 | 3300044683 | Ga0466965_0001045 | Ga0466965_0001045_565_1296 | 235 |
| 143 | 3300044684 | Ga0466966_0254969 | Ga0466966_0254969_149_856 | 235 |
| 144 | 3300044693 | Ga0466961_0226531 | Ga0466961_0226531_226_933 | 235 |
| 145 | 3300044694 | Ga0466963_0212727 | Ga0466963_0212727_251_982 | 235 |
| 146 | 3300044765 | Ga0466970_0003636 | Ga0466970_0003636_2053_2784 | 235 |
| 147 | 3300044765 | Ga0466970_0022877 | Ga0466970_0022877_1838_2545 | 235 |
| 148 | 3300044842 | Ga0466957_0017520 | Ga0466957_0017520_2643_3374 | 235 |
| 149 | 3300044901 | Ga0466960_0002265 | Ga0466960_0002265_3896_4627 | 235 |
| 150 | 3300045976 | Ga0466967_0228146 | Ga0466967_0228146_125_844 | 235 |
| 151 | 3300046616 | Ga0495668_0000173 | Ga0495668_0000173_35116_35841 | 235 |
| 152 | 3300046660 | Ga0495625_0001016 | Ga0495625_0001016_30711_31436 | 235 |
| 153 | 3300047323 | Ga0495683_0090202 | Ga0495683_0090202_302_1027 | 235 |
| 154 | 3300048091 | Ga0495626_0000642 | Ga0495626_0000642_9653_10378 | 235 |
| 155 | 3300048908 | Ga0496105_0049543 | Ga0496105_0049543_1027_1791 | 235 |
| 156 | 3300048911 | Ga0496108_0069608 | Ga0496108_0069608_118_882 | 235 |
| 157 | 3300048915 | Ga0496112_0143054 | Ga0496112_0143054_1098_1862 | 235 |
| 158 | 3300048915 | Ga0496112_0474207 | Ga0496112_0474207_124_888 | 235 |
| 159 | 3300048916 | Ga0496113_0002002 | Ga0496113_0002002_7338_8102 | 235 |
| 160 | 3300048922 | Ga0496119_0005331 | Ga0496119_0005331_1622_2365 | 235 |
| 161 | 3300048929 | Ga0496126_0226003 | Ga0496126_0226003_775_1500 | 235 |
| 162 | 3300050507 | nmdc:mga05p37_34314_c1 | nmdc:mga05p37_34314_c1_2907_3629 | 235 |
| 163 | 3300050507 | nmdc:mga05p37_4281_c1 | nmdc:mga05p37_4281_c1_8669_9376 | 235 |
| 164 | 3300050508 | nmdc:mga09592_6259_c1 | nmdc:mga09592_6259_c1_3659_4381 | 235 |
| 165 | iso_pu_bacteria | 2721755702 | 2723643374 | 235 |
| 166 | iso_pu_bacteria | 2772190715 | 2772646110 | 235 |
| 167 | iso_pu_bacteria | 2855670206 | 2855670755 | 235 |
| 168 | iso_pu_bacteria | 2855676851 | 2855677816 | 235 |
| 169 | iso_pu_bacteria | 2857288857 | 2857289685 | 235 |
| 170 | iso_pu_bacteria | 2858848962 | 2858849348 | 235 |
| 171 | iso_pu_bacteria | 2858882152 | 2858882495 | 235 |
| 172 | iso_pu_bacteria | 2858888857 | 2858894670 | 235 |
| 173 | iso_pu_bacteria | 2858895516 | 2858895566 | 235 |
| 174 | iso_pu_bacteria | 2869048445 | 2869049622 | 235 |
| 175 | iso_pu_bacteria | 2869061728 | 2869063246 | 235 |
| 176 | iso_pu_bacteria | 2869068681 | 2869069654 | 235 |
| 177 | iso_pu_bacteria | 2880489317 | 2880490856 | 235 |
| 178 | iso_pu_bacteria | 2880495981 | 2880501659 | 235 |
| 179 | iso_pu_bacteria | 2887478801 | 2887480892 | 235 |
| 180 | iso_pu_bacteria | 2929226422 | 2929230162 | 235 |
| 181 | iso_pu_bacteria | 2935409751 | 2935411855 | 235 |
| 182 | iso_pu_bacteria | 8003830390 | 8003833919 | 235 |
| 183 | iso_pu_bacteria | 8003870546 | 8003872438 | 235 |
| 184 | iso_pu_bacteria | 8045830549 | 8045832427 | 235 |
| 185 | iso_pu_bacteria | 8046352972 | 8046354279 | 235 |
| 186 | iso_pu_bacteria | 8054704163 | 8054705877 | 235 |
| 187 | iso_pu_bacteria | 8054727385 | 8054728894 | 235 |
| 188 | iso_pu_bacteria | 8054734606 | 8054734759 | 235 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1ji0-assembly1.cif.gz_A | crystal structure analysis of the abc transporter from thermotoga maritima | 0.9619 | 2 | 235 |
| 1ji0-assembly1.cif.gz_A | crystal structure analysis of the abc transporter from thermotoga maritima | 0.95 | 2 | 235 |
| 4yer-assembly1.cif.gz_A | crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution | 0.9449 | 2 | 222 |
| 4yer-assembly1.cif.gz_B | crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution | 0.9449 | 2 | 222 |
| 7x0q-assembly1.cif.gz_B | crystal structure of atpase clo1313_2554 from clostridium thermocellum | 0.9381 | 1 | 222 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P22731_1_237_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9704 | 1 | 235 | 3.40.50.300 |
| af_P22731_1_237_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9583 | 1 | 235 | 3.40.50.300 |
| af_Q58664_1_235_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9565 | 1 | 230 | 3.40.50.300 |
| 1ji0A00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9562 | 2 | 235 | 3.40.50.300 |
| 2awoD01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9476 | 2 | 217 | 3.40.50.300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A521W3S2-F1-model_v4 | ABC transporter ATP-binding protein | 0.9808 | 1 | 235 |
GO:0005524
GO:0005886 GO:0015658 GO:0015807 GO:0016887 |
| AF-A0A496QUQ5-F1-model_v4 | ABC transporter ATP-binding protein | 0.9768 | 2 | 235 |
GO:0005524
GO:0015658 GO:0015807 GO:0016887 |
| AF-A0A521W3S2-F1-model_v4 | ABC transporter ATP-binding protein | 0.9767 | 1 | 235 |
GO:0005524
GO:0005886 GO:0015658 GO:0015807 GO:0016887 |
| AF-A0A7T2SAA5-F1-model_v4 | ABC transporter ATP-binding protein | 0.9748 | 2 | 235 |
GO:0005524
GO:0005886 GO:0015658 GO:0015807 GO:0016887 |
| AF-A0A382XKN7-F1-model_v4 | ABC transporter domain-containing protein | 0.9733 | 4 | 215 |
GO:0005524
GO:0015658 GO:0015807 GO:0016887 |
Predicted Structure (AlphaFold2)
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