F248680

General Info

Members Datasets Scaffolds Average Seq Length
166 100 166 378

Family's Representative Sequence

Representative Sequence 3300031240|Ga0265320_10063631|Ga0265320_100636311
Length 423
Sequence VNSQSATPAAPRSVRRILVRGVNWLGDAVMTTPALLRLREHFLEAHITLLTPAKLKDLWSHHRAINEIIAFGPDDTLWEIARKIRVHSHSFGQGKEDPAELGTGALAADSPSIGSVRGQVLSHAGSSFDLALVLPNSPRSALEVWLAGIPRRVGFARPWRNWFLTQAVPARPGHTRMRKRSVAEIKRLIDSRNEPPQPPAFTPQVPSAHQLYDYLHLVAALGANPEPLPPHLTVTPEDIDKAVRKFNLTGAAPSDRLLLAVSPGAEYGPAKRWPVERFIAATREIHKRTKCFWLILGSTGDVEVAGRIEFGLRTLDSELRNLAGQTSLRELCALLKCCRVLLTNDTGPMHLAAALGTPVVVPFGSTSPELTGPGLPGDPRPRLLKSEALCSPCFRRECPIDFRCMNGIGVDRVVDAVVGALKR

Samples

Sample ID Description Type Environment
1 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
2 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
3 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
4 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
5 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
6 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
7 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
8 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
9 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
10 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
11 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
12 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
13 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
14 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
15 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
16 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
17 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
18 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
19 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
20 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
22 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
23 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
24 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
25 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
26 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
37 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
38 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
39 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
40 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
41 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
42 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
43 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
44 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
45 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
46 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
47 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
48 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
49 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
50 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
51 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
52 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
53 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
54 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
55 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
56 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
57 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
58 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
59 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
60 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
61 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
62 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
63 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
64 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
65 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
66 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
67 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
68 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
69 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
70 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
71 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
72 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
73 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
74 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
75 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
76 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
77 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
78 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
79 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
80 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
81 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
82 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
83 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
84 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
85 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
86 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
87 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
88 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
89 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
90 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
91 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
92 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
93 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
94 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
95 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
98 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
99 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
100 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.6
Nodule 0
Rhizoplane 0.6
Rhizosphere 98.8
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070666_10043764 3300005335 Unclassified 2999
2 Ga0070689_100124102 3300005340 Bacteria 2065
3 Ga0070714_100001206 3300005435 Bacteria 18639
4 Ga0070694_100063576 3300005444 Bacteria 2524
5 Ga0070681_10194339 3300005458 Bacteria 1948
6 Ga0070681_10271177 3300005458 Bacteria 1608
7 Ga0070679_100044233 3300005530 Bacteria 4436
8 Ga0070686_100012180 3300005544 Bacteria 4892
9 Ga0070695_100098449 3300005545 Unclassified 1965
10 Ga0068855_100034015 3300005563 Bacteria 6080
11 Ga0068855_100120658 3300005563 Bacteria 3001
12 Ga0068857_100007993 3300005577 Bacteria 9129
13 Ga0068856_100107620 3300005614 Bacteria 2784
14 Ga0068864_100126631 3300005618 Unclassified 2289
15 Ga0068863_100168521 3300005841 Unclassified 2100
16 Ga0075367_10071959 3300006178 Bacteria 2081
17 Ga0097621_100062644 3300006237 Unclassified 3054
18 Ga0075428_100027339 3300006844 Bacteria 6313
19 Ga0075430_100150779 3300006846 Bacteria 1936
20 Ga0075430_100169006 3300006846 Unclassified 1819
21 Ga0075431_100024175 3300006847 Bacteria 6221
22 Ga0075431_100071835 3300006847 Bacteria 3571
23 Ga0075431_100172356 3300006847 Bacteria 2223
24 Ga0075435_100340026 3300007076 Bacteria 1286
25 Ga0111539_10198324 3300009094 Unclassified 2341
26 Ga0105242_10341779 3300009176 Unclassified 1379
27 Ga0105238_10010240 3300009551 Bacteria 9405
28 Ga0105238_10072276 3300009551 Bacteria 3446
29 Ga0157375_10000041 3300013308 Bacteria 162765
30 Ga0163163_10010259 3300014325 Bacteria 8415
31 Ga0157376_10056813 3300014969 Unclassified 3272
32 Ga0207680_10031338 3300025903 Unclassified 3011
33 Ga0207707_10327941 3300025912 Unclassified 1321
34 Ga0207652_10058483 3300025921 Bacteria 3322
35 Ga0207694_10020844 3300025924 Bacteria 4962
36 Ga0207700_10218634 3300025928 Bacteria 1614
37 Ga0207664_10001299 3300025929 Bacteria 16472
38 Ga0207670_10013266 3300025936 Bacteria 4851
39 Ga0207667_10299809 3300025949 Unclassified 1642
40 Ga0207676_10428647 3300026095 Unclassified 1242
41 Ga0207674_10018627 3300026116 Bacteria 7542
42 Ga0265337_1000149 3300028556 Bacteria 35191
43 Ga0265337_1001146 3300028556 Bacteria 13531
44 Ga0265337_1002112 3300028556 Bacteria 9377
45 Ga0265337_1007057 3300028556 Bacteria 4246
46 Ga0265337_1029763 3300028556 Bacteria 1631
47 Ga0265326_10005712 3300028558 Bacteria 3910
48 Ga0265326_10006558 3300028558 Bacteria 3606
49 Ga0265319_1014603 3300028563 Bacteria 3077
50 Ga0265334_10016521 3300028573 Bacteria 3053
51 Ga0265334_10035186 3300028573 Bacteria 1984
52 Ga0265323_10000799 3300028653 Bacteria 16878
53 Ga0265323_10013651 3300028653 Bacteria 3234
54 Ga0265322_10009893 3300028654 Bacteria 2766
55 Ga0265336_10000242 3300028666 Bacteria 38866
56 Ga0265336_10010379 3300028666 Bacteria 3189
57 Ga0265338_10000129 3300028800 Bacteria 138608
58 Ga0265338_10000279 3300028800 Bacteria 92884
59 Ga0265338_10000604 3300028800 Bacteria 63073
60 Ga0265338_10001091 3300028800 Bacteria 45113
61 Ga0265338_10002723 3300028800 Bacteria 25932
62 Ga0265338_10004841 3300028800 Bacteria 17966
63 Ga0265338_10006601 3300028800 Bacteria 14709
64 Ga0265338_10019134 3300028800 Bacteria 7288
65 Ga0265338_10021279 3300028800 Bacteria 6771
66 Ga0265338_10022063 3300028800 Bacteria 6613
67 Ga0265338_10023071 3300028800 Bacteria 6410
68 Ga0265338_10025464 3300028800 Bacteria 6001
69 Ga0265338_10037088 3300028800 Bacteria 4647
70 Ga0265338_10097668 3300028800 Bacteria 2405
71 Ga0265338_10203775 3300028800 Bacteria 1490
72 Ga0265324_10000188 3300029957 Bacteria 47481
73 Ga0265324_10012768 3300029957 Bacteria 3156
74 Ga0265324_10027444 3300029957 Unclassified 2011
75 Ga0265328_10015487 3300031239 Unclassified 2986
76 Ga0265320_10000262 3300031240 Bacteria 43479
77 Ga0265320_10023447 3300031240 Bacteria 3285
78 Ga0265320_10037232 3300031240 Bacteria 2451
79 Ga0265320_10063631 3300031240 Bacteria 1754
80 Ga0265325_10004309 3300031241 Bacteria 9010
81 Ga0265329_10000582 3300031242 Bacteria 18881
82 Ga0265339_10006049 3300031249 Bacteria 7991
83 Ga0265339_10028197 3300031249 Bacteria 3195
84 Ga0265339_10029768 3300031249 Bacteria 3095
85 Ga0265339_10042835 3300031249 Bacteria 2506
86 Ga0265327_10000313 3300031251 Bacteria 93102
87 Ga0265327_10005833 3300031251 Bacteria 10098
88 Ga0265327_10007798 3300031251 Bacteria 8161
89 Ga0265316_10005026 3300031344 Bacteria 12975
90 Ga0265316_10006619 3300031344 Bacteria 11031
91 Ga0265316_10089400 3300031344 Bacteria 2351
92 Ga0265316_10154535 3300031344 Bacteria 1717
93 Ga0265313_10023604 3300031595 Bacteria 3309
94 Ga0265314_10000170 3300031711 Bacteria 96635
95 Ga0265314_10020633 3300031711 Bacteria 5086
96 Ga0265314_10098251 3300031711 Bacteria 1889
97 Ga0316576_10090537 3300031727 Bacteria 2279
98 Ga0373928_0000173 3300035084 Bacteria 12507
99 Ga0373929_0000233 3300035085 Bacteria 10132
100 Ga0373944_0000006 3300035089 Bacteria 46890
101 Ga0373949_0000824 3300035090 Bacteria 9879
102 Ga0373951_0000512 3300035091 Bacteria 11034
103 Ga0373932_0000006 3300035112 Bacteria 208547
104 Ga0373945_0003698 3300035116 Bacteria 4824
105 Ga0373954_0020615 3300035118 Unclassified 2983
106 Ga0373954_0041297 3300035118 Bacteria 2150
107 Ga0373954_0092649 3300035118 Bacteria 1452
108 Ga0373956_0001742 3300035119 Bacteria 8958
109 Ga0373962_0000020 3300035242 Bacteria 44353
110 Ga0373931_0000009 3300035691 Bacteria 349854
111 Ga0373931_0066037 3300035691 Unclassified 1962
112 Ga0373935_0030897 3300035692 Bacteria 3320
113 Ga0373927_0006843 3300035695 Bacteria 7752
114 Ga0373947_0054132 3300035725 Bacteria 2421
115 Ga0373937_0031006 3300036401 Bacteria 4841
116 Ga0373925_0000235 3300037068 Bacteria 58451
117 Ga0373925_0004021 3300037068 Bacteria 11181
118 Ga0373925_0012857 3300037068 Bacteria 6063
119 Ga0439435_0030032 3300042436 Unclassified 1471
120 Ga0451577_0002579 3300042876 Bacteria 21385
121 Ga0451577_0033126 3300042876 Bacteria 4657
122 Ga0451577_0134476 3300042876 Bacteria 2219
123 Ga0453684_0010898 3300044712 Bacteria 15393
124 Ga0453684_0011439 3300044712 Bacteria 14883
125 Ga0451576_0061555 3300045051 Bacteria 3914
126 Ga0451576_0077347 3300045051 Unclassified 3463
127 Ga0451576_0078015 3300045051 Bacteria 3447
128 Ga0451576_0091737 3300045051 Bacteria 3160
129 Ga0451576_0093139 3300045051 Unclassified 3133
130 Ga0451576_0170515 3300045051 Unclassified 2271
131 Ga0451576_0182918 3300045051 Bacteria 2188
132 Ga0495592_0001029 3300046454 Bacteria 19365
133 Ga0495662_0004743 3300046476 Bacteria 6812
134 Ga0495664_0019472 3300046477 Bacteria 3902
135 Ga0495618_0001216 3300046514 Bacteria 17464
136 Ga0495618_0015218 3300046514 Bacteria 4693
137 Ga0495628_0000050 3300046516 Bacteria 93131
138 Ga0495630_0030866 3300046517 Bacteria 3989
139 Ga0495630_0081899 3300046517 Bacteria 2435
140 Ga0495652_0097413 3300046529 Bacteria 2393
141 Ga0495640_0005188 3300046533 Bacteria 10355
142 Ga0495586_0000621 3300046535 Bacteria 20516
143 Ga0495586_0001043 3300046535 Bacteria 15633
144 Ga0495586_0062253 3300046535 Unclassified 2031
145 Ga0495645_0039401 3300046543 Bacteria 3446
146 Ga0495645_0094603 3300046543 Unclassified 2131
147 Ga0495645_0144085 3300046543 Bacteria 1660
148 Ga0495622_0013985 3300046557 Bacteria 3725
149 Ga0495667_0012270 3300046559 Bacteria 5808
150 Ga0495667_0160946 3300046559 Unclassified 1444
151 Ga0495634_0001500 3300046642 Bacteria 20653
152 Ga0495635_0002611 3300046663 Bacteria 12334
153 Ga0495599_0047656 3300046678 Bacteria 2686
154 Ga0495658_0009871 3300046683 Bacteria 4762
155 Ga0495613_0099947 3300046689 Bacteria 2095
156 Ga0495624_0011124 3300046690 Bacteria 6191
157 Ga0495680_0007067 3300047322 Bacteria 10343
158 Ga0496106_0162090 3300048909 Bacteria 1769
159 Ga0501033_0059472 3300049570 Unclassified 2822
160 Ga0501035_0146326 3300049822 Bacteria 2052
161 Ga0501044_0154480 3300049823 Bacteria 2275
162 nmdc:mga0qj67_207340_c1 3300050509 Unclassified 1592
163 nmdc:mga06r32_102002_c1 3300050510 Bacteria 2816
164 nmdc:mga06r32_157927_c1 3300050510 Unclassified 2250
165 nmdc:mga06r32_64239_c1 3300050510 Bacteria 3539
166 nmdc:mga08y16_159947_c1 3300050511 Unclassified 2340

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049823 Ga0501044_0154480 Ga0501044_0154480_765_1901 307
2 3300028563 Ga0265319_1014603 Ga0265319_10146032 309
3 3300031240 Ga0265320_10023447 Ga0265320_100234472 309
4 3300006178 Ga0075367_10071959 Ga0075367_100719592 316
5 3300042876 Ga0451577_0134476 Ga0451577_0134476_88_1158 316
6 3300006846 Ga0075430_100169006 Ga0075430_1001690062 321
7 3300006847 Ga0075431_100024175 Ga0075431_1000241755 321
8 3300045051 Ga0451576_0182918 Ga0451576_0182918_583_1614 321
9 3300050509 nmdc:mga0qj67_207340_c1 nmdc:mga0qj67_207340_c1_91_1161 321
10 3300050510 nmdc:mga06r32_157927_c1 nmdc:mga06r32_157927_c1_577_1647 321
11 3300031239 Ga0265328_10015487 Ga0265328_100154872 330
12 3300031242 Ga0265329_10000582 Ga0265329_100005824 330
13 3300031711 Ga0265314_10000170 Ga0265314_1000017056 330
14 3300028800 Ga0265338_10023071 Ga0265338_100230713 332
15 3300031727 Ga0316576_10090537 Ga0316576_100905372 334
16 3300005563 Ga0068855_100120658 Ga0068855_1001206583 335
17 3300005614 Ga0068856_100107620 Ga0068856_1001076203 335
18 3300009551 Ga0105238_10010240 Ga0105238_100102404 335
19 3300025924 Ga0207694_10020844 Ga0207694_100208442 335
20 3300031251 Ga0265327_10005833 Ga0265327_100058336 335
21 3300037068 Ga0373925_0012857 Ga0373925_0012857_2551_3639 335
22 3300048909 Ga0496106_0162090 Ga0496106_0162090_449_1528 335
23 3300028800 Ga0265338_10021279 Ga0265338_1002127910 336
24 3300031249 Ga0265339_10029768 Ga0265339_100297682 336
25 3300005563 Ga0068855_100034015 Ga0068855_1000340151 337
26 3300025949 Ga0207667_10299809 Ga0207667_102998091 337
27 3300028800 Ga0265338_10203775 Ga0265338_102037752 337
28 3300031240 Ga0265320_10037232 Ga0265320_100372321 338
29 3300009176 Ga0105242_10341779 Ga0105242_103417792 339
30 3300028573 Ga0265334_10016521 Ga0265334_100165213 339
31 3300035691 Ga0373931_0066037 Ga0373931_0066037_110_1186 339
32 3300042436 Ga0439435_0030032 Ga0439435_0030032_136_1218 339
33 3300042876 Ga0451577_0033126 Ga0451577_0033126_1480_2541 339
34 3300046454 Ga0495592_0001029 Ga0495592_0001029_11907_13067 339
35 3300046476 Ga0495662_0004743 Ga0495662_0004743_2854_3969 339
36 3300046477 Ga0495664_0019472 Ga0495664_0019472_2078_3193 339
37 3300046514 Ga0495618_0001216 Ga0495618_0001216_13211_14371 339
38 3300046516 Ga0495628_0000050 Ga0495628_0000050_82163_83278 339
39 3300046529 Ga0495652_0097413 Ga0495652_0097413_236_1396 339
40 3300046533 Ga0495640_0005188 Ga0495640_0005188_6324_7439 339
41 3300046535 Ga0495586_0000621 Ga0495586_0000621_6330_7445 339
42 3300046543 Ga0495645_0039401 Ga0495645_0039401_2228_3388 339
43 3300046678 Ga0495599_0047656 Ga0495599_0047656_662_1777 339
44 3300046690 Ga0495624_0011124 Ga0495624_0011124_1809_2924 339
45 3300006844 Ga0075428_100027339 Ga0075428_1000273394 340
46 3300009094 Ga0111539_10198324 Ga0111539_101983242 340
47 3300028800 Ga0265338_10000604 Ga0265338_1000060443 340
48 3300031240 Ga0265320_10000262 Ga0265320_1000026233 340
49 3300050511 nmdc:mga08y16_159947_c1 nmdc:mga08y16_159947_c1_1043_2140 340
50 3300005545 Ga0070695_100098449 Ga0070695_1000984492 341
51 3300006846 Ga0075430_100150779 Ga0075430_1001507791 341
52 3300006847 Ga0075431_100071835 Ga0075431_1000718351 341
53 3300006847 Ga0075431_100172356 Ga0075431_1001723562 341
54 3300009551 Ga0105238_10072276 Ga0105238_100722763 341
55 3300028556 Ga0265337_1029763 Ga0265337_10297632 341
56 3300028654 Ga0265322_10009893 Ga0265322_100098933 341
57 3300028800 Ga0265338_10022063 Ga0265338_100220636 341
58 3300028800 Ga0265338_10037088 Ga0265338_100370883 341
59 3300031344 Ga0265316_10089400 Ga0265316_100894002 341
60 3300046543 Ga0495645_0094603 Ga0495645_0094603_86_1216 341
61 3300050510 nmdc:mga06r32_102002_c1 nmdc:mga06r32_102002_c1_913_2028 341
62 3300050510 nmdc:mga06r32_64239_c1 nmdc:mga06r32_64239_c1_1156_2286 341
63 3300005444 Ga0070694_100063576 Ga0070694_1000635762 342
64 3300005544 Ga0070686_100012180 Ga0070686_1000121803 342
65 3300031249 Ga0265339_10042835 Ga0265339_100428353 342
66 3300031344 Ga0265316_10005026 Ga0265316_100050265 342
67 3300045051 Ga0451576_0078015 Ga0451576_0078015_82_1260 342
68 3300028556 Ga0265337_1000149 Ga0265337_100014942 343
69 3300028558 Ga0265326_10006558 Ga0265326_100065583 343
70 3300028666 Ga0265336_10000242 Ga0265336_1000024230 343
71 3300028800 Ga0265338_10000279 Ga0265338_1000027926 343
72 3300028800 Ga0265338_10001091 Ga0265338_1000109118 343
73 3300028800 Ga0265338_10002723 Ga0265338_100027238 343
74 3300028800 Ga0265338_10006601 Ga0265338_100066014 343
75 3300029957 Ga0265324_10000188 Ga0265324_1000018840 343
76 3300031249 Ga0265339_10028197 Ga0265339_100281972 343
77 3300046517 Ga0495630_0030866 Ga0495630_0030866_2742_3851 343
78 3300046543 Ga0495645_0144085 Ga0495645_0144085_41_1171 343
79 3300049822 Ga0501035_0146326 Ga0501035_0146326_482_1630 343
80 3300005577 Ga0068857_100007993 Ga0068857_1000079933 344
81 3300005618 Ga0068864_100126631 Ga0068864_1001266313 344
82 3300014325 Ga0163163_10010259 Ga0163163_100102599 344
83 3300026095 Ga0207676_10428647 Ga0207676_104286471 344
84 3300026116 Ga0207674_10018627 Ga0207674_100186275 344
85 3300028800 Ga0265338_10000129 Ga0265338_1000012956 344
86 3300028800 Ga0265338_10019134 Ga0265338_100191342 344
87 3300029957 Ga0265324_10012768 Ga0265324_100127682 344
88 3300035084 Ga0373928_0000173 Ga0373928_0000173_10410_11549 344
89 3300035085 Ga0373929_0000233 Ga0373929_0000233_3164_4303 344
90 3300035089 Ga0373944_0000006 Ga0373944_0000006_33631_34770 344
91 3300035090 Ga0373949_0000824 Ga0373949_0000824_783_1922 344
92 3300035091 Ga0373951_0000512 Ga0373951_0000512_4963_6102 344
93 3300035112 Ga0373932_0000006 Ga0373932_0000006_113268_114407 344
94 3300035116 Ga0373945_0003698 Ga0373945_0003698_1617_2756 344
95 3300035118 Ga0373954_0020615 Ga0373954_0020615_837_2030 344
96 3300035118 Ga0373954_0041297 Ga0373954_0041297_797_1948 344
97 3300035118 Ga0373954_0092649 Ga0373954_0092649_90_1232 344
98 3300035119 Ga0373956_0001742 Ga0373956_0001742_5855_7048 344
99 3300035242 Ga0373962_0000020 Ga0373962_0000020_37907_39046 344
100 3300035691 Ga0373931_0000009 Ga0373931_0000009_111583_112722 344
101 3300035695 Ga0373927_0006843 Ga0373927_0006843_1157_2302 344
102 3300036401 Ga0373937_0031006 Ga0373937_0031006_1432_2625 344
103 3300037068 Ga0373925_0000235 Ga0373925_0000235_10351_11490 344
104 3300046514 Ga0495618_0015218 Ga0495618_0015218_1095_2288 344
105 3300046535 Ga0495586_0001043 Ga0495586_0001043_9041_10234 344
106 3300046557 Ga0495622_0013985 Ga0495622_0013985_42_1172 344
107 3300046559 Ga0495667_0012270 Ga0495667_0012270_3771_4964 344
108 3300046642 Ga0495634_0001500 Ga0495634_0001500_11551_12744 344
109 3300046663 Ga0495635_0002611 Ga0495635_0002611_3733_4926 344
110 3300046689 Ga0495613_0099947 Ga0495613_0099947_189_1382 344
111 3300047322 Ga0495680_0007067 Ga0495680_0007067_4696_5889 344
112 3300006237 Ga0097621_100062644 Ga0097621_1000626442 345
113 3300031711 Ga0265314_10098251 Ga0265314_100982512 345
114 3300045051 Ga0451576_0061555 Ga0451576_0061555_2461_3588 345
115 3300045051 Ga0451576_0170515 Ga0451576_0170515_970_2112 345
116 3300005841 Ga0068863_100168521 Ga0068863_1001685213 346
117 3300014969 Ga0157376_10056813 Ga0157376_100568132 346
118 3300025928 Ga0207700_10218634 Ga0207700_102186342 346
119 3300029957 Ga0265324_10027444 Ga0265324_100274442 346
120 3300031251 Ga0265327_10007798 Ga0265327_100077983 346
121 3300049570 Ga0501033_0059472 Ga0501033_0059472_154_1380 346
122 3300005340 Ga0070689_100124102 Ga0070689_1001241022 347
123 3300005435 Ga0070714_100001206 Ga0070714_10000120610 347
124 3300005458 Ga0070681_10194339 Ga0070681_101943391 347
125 3300005458 Ga0070681_10271177 Ga0070681_102711772 347
126 3300005530 Ga0070679_100044233 Ga0070679_1000442334 347
127 3300007076 Ga0075435_100340026 Ga0075435_1003400261 347
128 3300025912 Ga0207707_10327941 Ga0207707_103279412 347
129 3300025921 Ga0207652_10058483 Ga0207652_100584834 347
130 3300025929 Ga0207664_10001299 Ga0207664_1000129910 347
131 3300025936 Ga0207670_10013266 Ga0207670_100132663 347
132 3300031251 Ga0265327_10000313 Ga0265327_1000031321 347
133 3300035692 Ga0373935_0030897 Ga0373935_0030897_1133_2314 347
134 3300035725 Ga0373947_0054132 Ga0373947_0054132_903_2084 347
135 3300037068 Ga0373925_0004021 Ga0373925_0004021_2271_3452 347
136 3300046517 Ga0495630_0081899 Ga0495630_0081899_879_2060 347
137 3300046683 Ga0495658_0009871 Ga0495658_0009871_3468_4595 347
138 3300028653 Ga0265323_10000799 Ga0265323_1000079913 348
139 3300031240 Ga0265320_10063631 Ga0265320_100636311 348
140 3300031344 Ga0265316_10154535 Ga0265316_101545353 348
141 3300042876 Ga0451577_0002579 Ga0451577_0002579_19325_20503 348
142 3300044712 Ga0453684_0011439 Ga0453684_0011439_13555_14733 348
143 3300028573 Ga0265334_10035186 Ga0265334_100351861 349
144 3300028653 Ga0265323_10013651 Ga0265323_100136514 349
145 3300028800 Ga0265338_10004841 Ga0265338_100048418 349
146 3300031344 Ga0265316_10006619 Ga0265316_100066193 349
147 3300046559 Ga0495667_0160946 Ga0495667_0160946_65_1201 349
148 3300028800 Ga0265338_10097668 Ga0265338_100976681 350
149 3300045051 Ga0451576_0077347 Ga0451576_0077347_10_1140 350
150 3300046535 Ga0495586_0062253 Ga0495586_0062253_582_1727 350
151 3300028556 Ga0265337_1001146 Ga0265337_10011462 352
152 3300028556 Ga0265337_1007057 Ga0265337_10070571 352
153 3300028558 Ga0265326_10005712 Ga0265326_100057123 352
154 3300028666 Ga0265336_10010379 Ga0265336_100103791 352
155 3300028800 Ga0265338_10025464 Ga0265338_100254644 352
156 3300031241 Ga0265325_10004309 Ga0265325_100043093 352
157 3300031249 Ga0265339_10006049 Ga0265339_100060496 352
158 3300031595 Ga0265313_10023604 Ga0265313_100236043 352
159 3300031711 Ga0265314_10020633 Ga0265314_100206334 352
160 3300045051 Ga0451576_0091737 Ga0451576_0091737_382_1614 352
161 3300045051 Ga0451576_0093139 Ga0451576_0093139_1034_2221 352
162 3300028556 Ga0265337_1002112 Ga0265337_10021124 354
163 3300044712 Ga0453684_0010898 Ga0453684_0010898_4438_5688 361
164 3300005335 Ga0070666_10043764 Ga0070666_100437642 362
165 3300013308 Ga0157375_10000041 Ga0157375_1000004158 362
166 3300025903 Ga0207680_10031338 Ga0207680_100313382 362

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01075

Glyco_transf_9

Glycosyltransferase family 9 (heptosyltransferase)

122

402

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
3tov-assembly2.cif.gz_B the crystal structure of the glycosyl transferase family 9 from veillonella parvula dsm 2008 0.8408 2 361
3tov-assembly1.cif.gz_A the crystal structure of the glycosyl transferase family 9 from veillonella parvula dsm 2008 0.8358 2 361
1psw-assembly1.cif.gz_A structure of e. coli adp-heptose lps heptosyltransferase ii 0.8066 2 361
3tov-assembly2.cif.gz_B the crystal structure of the glycosyl transferase family 9 from veillonella parvula dsm 2008 0.7796 2 361
6dfe-assembly1.cif.gz_A the structure of a ternary complex of e. coli waac 0.7787 2 359
ID Description Score Start End Superfamily
af_P37692_2_151_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9213 2 103 3.40.50.2000
af_P25742_1_146_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8471 2 108 3.40.50.2000
1pswA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.843 2 105 3.40.50.2000
af_P25742_154_333_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8184 174 361 3.40.50.2000
af_P27242_36_183_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8171 3 100 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A523ZYU8-F1-model_v4 lipopolysaccharide heptosyltransferase II (EC 2.4.99.24) 0.9606 200 361 GO:0005829
GO:0008713
GO:0009244
AF-A0A7W2A080-F1-model_v4 Glycosyltransferase family 9 protein 0.9506 197 361 GO:0005829
GO:0008713
GO:0009244
AF-A0A7X7G132-F1-model_v4 Glycosyltransferase family 9 protein 0.9496 209 361 GO:0005829
GO:0008713
GO:0009244
AF-A0A523ZYU8-F1-model_v4 lipopolysaccharide heptosyltransferase II (EC 2.4.99.24) 0.949 200 361 GO:0005829
GO:0008713
GO:0009244
AF-A0A661KJU1-F1-model_v4 lipopolysaccharide heptosyltransferase II (EC 2.4.99.24) 0.9412 193 361 GO:0005829
GO:0008713
GO:0009244

Feature Viewer

pLDDT pTM Quality
88.74 0.88 High
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Predicted Structure (AlphaFold2)

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