F236933

General Info

Members Datasets Scaffolds Average Seq Length
161 117 154 681

Family's Representative Sequence

Representative Sequence 3300009545|Ga0105237_10001909|Ga0105237_100019094
Length 734
Sequence MAKVHSVYLHRVHSANILSTPVIGLLLVFIKIPAVIMNRNIHLKKWALPVIVLMSTQLMNTSCNSSQQSAHVTDTATAKPANDTFKVEAESFADLQLLRYQIPGFNELSLQQKKLAYYLYQAALSGRDIIYDQKSKYGLLLRKTIEAVYGSYKGDKNNDNWKKFEVYCGRFWFSNGNHHHYSNDKFIPECSYEYFAEIVKNSDAAQLPLQSGETVDAFLTRIKPMVYDLNFEPKVVDQRPDIDNVAHSSNNFYEGVTQKEVEAFYAKFDTKGDAPSWGLNSKLMKVNGTIEEKVWKSGGMYGAAIDHIIEWLDKAVTVAEDSDQKQALQLLVQFYKTGNLKTWDDYSIAWVKDTASRIDVVNGFIEVYLDAIGKKGSFESTVSLKDLEETKRIKAIADEAQWFEDNSPIMPEHKKKNVKGISAKAITVIVESGDAAPSTPIGINLPNADWVRAEHGSKSVSLSNIIHAYNESSAKSGMLEEFAVNDTVMQRMKKYGPLASDLHTDMHECIGHASGQINPGVETTDKTLKNYASTLEEARADLVGLYFIMDHKLVEIGVMPNMDVAKTEYDSYMMNGLMTQLTRLKPGENLEEAHMRNRQLIARWAYEHGKKDNVVEFVKKDGKTYVRVNDYDKLRTLFGQLLREIQRIKSEGDFNGGKALVENYGVKVDDALHNEVLARFAKLNIKPYKGFIQPKLVPIMNGSDITDVKVEYPTSFYQQMMEYGKNYAYLPVVN

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2739367866 Hymenobacter sp. YR204 Isolate Unclassified
3 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
4 2881955468 Edaphocola flava HME-24 Isolate Rhizosphere
5 2890804823 Fluviicola sp. SGL-29 Isolate Rhizosphere
6 2919509842 Flavobacterium arsenatis 3773 Isolate Unclassified
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
10 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
13 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
16 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
17 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
18 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
22 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
23 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
24 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
25 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
26 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
27 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
28 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
51 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
79 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
80 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
81 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
82 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
83 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
84 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
85 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
86 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
87 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
88 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
89 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
90 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
91 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
92 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
93 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
94 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
95 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
96 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
97 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
98 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
99 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
100 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
101 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
102 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
103 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
105 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
111 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
112 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
114 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
115 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
116 8036736890 Flavobacterium dauae TCH3-2 Isolate Rhizosphere
117 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.65
Metatranscriptomes 0
Isolates 4.35

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.62
Nodule 0
Rhizoplane 4.35
Rhizosphere 90.68
Stem 0
Stem Tuber 0
Unclassified 4.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1663676 2162886007 Bacteria 241831
2 rootH2_10054987 3300003320 Bacteria 4560
3 rootH1_10030105 3300003323 Bacteria 5372
4 rootH1_10279829 3300003323 Unclassified 3595
5 Ga0065704_10070136 3300005289 Bacteria 560402
6 Ga0065704_10071123 3300005289 Bacteria 13011
7 Ga0065704_10079003 3300005289 Bacteria 4283
8 Ga0070658_10023862 3300005327 Bacteria 4906
9 Ga0070670_100004632 3300005331 Bacteria 11538
10 Ga0068869_100026729 3300005334 Bacteria 4019
11 Ga0068869_100041217 3300005334 Bacteria 3305
12 Ga0070666_10002421 3300005335 Bacteria 11281
13 Ga0070680_100005567 3300005336 Bacteria 9537
14 Ga0070680_100086960 3300005336 Bacteria 2584
15 Ga0070682_100000129 3300005337 Bacteria 64098
16 Ga0068868_100001057 3300005338 Bacteria 18851
17 Ga0070660_100001323 3300005339 Bacteria 16832
18 Ga0070660_100013641 3300005339 Bacteria 5839
19 Ga0070661_100081495 3300005344 Bacteria 2389
20 Ga0070668_100061204 3300005347 Unclassified 2916
21 Ga0070669_100086250 3300005353 Bacteria 2345
22 Ga0070675_100052102 3300005354 Unclassified 3364
23 Ga0070671_100008556 3300005355 Bacteria 8204
24 Ga0070674_100001118 3300005356 Bacteria 14084
25 Ga0070688_100016259 3300005365 Bacteria 4250
26 Ga0070659_100002676 3300005366 Bacteria 12666
27 Ga0070659_100025845 3300005366 Bacteria 4516
28 Ga0070667_100001791 3300005367 Bacteria 19122
29 Ga0070663_100031063 3300005455 Unclassified 3667
30 Ga0070681_10023031 3300005458 Bacteria 6262
31 Ga0070679_100120098 3300005530 Bacteria 2613
32 Ga0068855_100019773 3300005563 Bacteria 8088
33 Ga0070664_100000857 3300005564 Bacteria 23536
34 Ga0068856_100044558 3300005614 Bacteria 4366
35 Ga0070702_100002930 3300005615 Bacteria 7517
36 Ga0068859_100015913 3300005617 Bacteria 7559
37 Ga0068864_100014325 3300005618 Bacteria 6586
38 Ga0068866_10002962 3300005718 Bacteria 7007
39 Ga0068863_100003168 3300005841 Bacteria 16263
40 Ga0068863_100029924 3300005841 Bacteria 5201
41 Ga0068860_100011464 3300005843 Bacteria 8734
42 Ga0068860_100066146 3300005843 Bacteria 3433
43 Ga0068862_100038686 3300005844 Bacteria 4047
44 Ga0070717_10000149 3300006028 Bacteria 52256
45 Ga0097620_100015913 3300006931 Bacteria 7559
46 Ga0105240_10000047 3300009093 Bacteria 239067
47 Ga0105245_10009988 3300009098 Bacteria 8264
48 Ga0105247_10002907 3300009101 Bacteria 11403
49 Ga0105243_10017292 3300009148 Bacteria 5452
50 Ga0105248_10008464 3300009177 Bacteria 11289
51 Ga0105237_10001909 3300009545 Bacteria 26592
52 Ga0105249_10064514 3300009553 Bacteria 3367
53 Ga0105239_10003908 3300010375 Bacteria 18060
54 Ga0105239_10044108 3300010375 Bacteria 4889
55 Ga0105246_10003898 3300011119 Bacteria 9038
56 Ga0157371_10002756 3300013102 Bacteria 16506
57 Ga0157370_10002079 3300013104 Bacteria 24513
58 Ga0157370_10065922 3300013104 Unclassified 3425
59 Ga0157370_10082657 3300013104 Bacteria 3020
60 Ga0157374_10032591 3300013296 Bacteria 4746
61 Ga0157378_10111821 3300013297 Bacteria 2505
62 Ga0163162_10006112 3300013306 Bacteria 11653
63 Ga0163162_10007296 3300013306 Bacteria 10741
64 Ga0157372_10003607 3300013307 Bacteria 16664
65 Ga0157372_10018785 3300013307 Bacteria 7436
66 Ga0157372_10065545 3300013307 Unclassified 4079
67 Ga0157375_10013761 3300013308 Bacteria 7213
68 Ga0157380_10000033 3300014326 Bacteria 86616
69 Ga0157380_10032538 3300014326 Bacteria 4013
70 Ga0207710_10007689 3300025900 Bacteria 4558
71 Ga0207680_10016416 3300025903 Bacteria 3886
72 Ga0207705_10007257 3300025909 Bacteria 8155
73 Ga0207705_10033273 3300025909 Bacteria 3682
74 Ga0207695_10000010 3300025913 Bacteria 981919
75 Ga0207671_10000130 3300025914 Bacteria 117434
76 Ga0207657_10004225 3300025919 Bacteria 15215
77 Ga0207652_10000051 3300025921 Bacteria 120327
78 Ga0207652_10000214 3300025921 Bacteria 61294
79 Ga0207681_10034656 3300025923 Bacteria 3320
80 Ga0207659_10060015 3300025926 Unclassified 2736
81 Ga0207690_10009082 3300025932 Bacteria 5899
82 Ga0207667_10029868 3300025949 Bacteria 5904
83 Ga0207678_10013503 3300026067 Bacteria 7170
84 Ga0207641_10007635 3300026088 Bacteria 8992
85 Ga0207641_10011043 3300026088 Bacteria 7408
86 Ga0207648_10004371 3300026089 Bacteria 14530
87 Ga0207676_10007710 3300026095 Bacteria 7650
88 Ga0207674_10018090 3300026116 Bacteria 7671
89 Ga0268266_10004908 3300028379 Bacteria 12676
90 Ga0268265_10067583 3300028380 Bacteria 2767
91 Ga0268264_10005081 3300028381 Bacteria 11145
92 Ga0268264_10045502 3300028381 Bacteria 3643
93 Ga0265334_10013163 3300028573 Unclassified 3467
94 Ga0265327_10000010 3300031251 Bacteria 566817
95 Ga0265327_10000090 3300031251 Bacteria 197158
96 Ga0265327_10000270 3300031251 Bacteria 102617
97 Ga0265327_10016695 3300031251 Bacteria 4645
98 Ga0307408_100000340 3300031548 Bacteria 44104
99 Ga0307408_100001373 3300031548 Bacteria 18154
100 Ga0307408_100002675 3300031548 Bacteria 12361
101 Ga0307405_10000001 3300031731 Bacteria 1731270
102 Ga0307405_10001885 3300031731 Bacteria 9010
103 Ga0307414_10003936 3300032004 Bacteria 8006
104 Ga0316583_10003992 3300032133 Bacteria 5243
105 Ga0373937_0028251 3300036401 Bacteria 5074
106 Ga0395899_0017226 3300037312 Bacteria 5505
107 Ga0395899_0035073 3300037312 Bacteria 3767
108 Ga0395898_0013466 3300037466 Bacteria 8421
109 Ga0395898_0145288 3300037466 Bacteria 2270
110 Ga0395901_0028050 3300038443 Bacteria 5790
111 Ga0400483_180509 3300039062 Bacteria 25541
112 Ga0451795_1646656 3300041456 Bacteria 2348
113 Ga0451577_0000034 3300042876 Bacteria 376183
114 Ga0451577_0000159 3300042876 Bacteria 148522
115 Ga0451577_0000983 3300042876 Bacteria 41480
116 Ga0451577_0028886 3300042876 Bacteria 5016
117 Ga0453683_0000032 3300044673 Bacteria 241702
118 Ga0453683_0000057 3300044673 Bacteria 190239
119 Ga0453684_0000098 3300044712 Bacteria 376183
120 Ga0453684_0000148 3300044712 Bacteria 308453
121 Ga0453684_0000574 3300044712 Bacteria 137306
122 Ga0453684_0001343 3300044712 Bacteria 72090
123 Ga0453684_0018264 3300044712 Bacteria 10781
124 Ga0453684_0055249 3300044712 Bacteria 5164
125 Ga0453684_0088692 3300044712 Unclassified 3829
126 Ga0451576_0000036 3300045051 Bacteria 376183
127 Ga0451576_0000411 3300045051 Bacteria 99403
128 Ga0495592_0033733 3300046454 Unclassified 3860
129 Ga0495668_0000450 3300046616 Bacteria 52543
130 Ga0495636_0000317 3300047318 Bacteria 18483
131 Ga0495686_0000814 3300047472 Bacteria 40340
132 Ga0496104_0017428 3300048907 Bacteria 6540
133 Ga0496106_0041941 3300048909 Bacteria 3431
134 Ga0496112_0011121 3300048915 Bacteria 8203
135 Ga0496114_0000515 3300048917 Bacteria 28421
136 Ga0496114_0001471 3300048917 Bacteria 17885
137 Ga0496115_0023251 3300048918 Unclassified 4809
138 Ga0501032_0005010 3300049569 Bacteria 9903
139 Ga0501033_0000061 3300049570 Bacteria 103115
140 Ga0501034_0007335 3300049571 Bacteria 11746
141 Ga0501034_0050109 3300049571 Bacteria 4212
142 Ga0501036_0007906 3300049572 Bacteria 8700
143 Ga0501038_0019077 3300049574 Bacteria 6184
144 Ga0501039_0003293 3300049575 Bacteria 12075
145 Ga0501043_0003218 3300049579 Bacteria 13483
146 Ga0501223_001159 3300049663 Bacteria 6214
147 Ga0501223_003822 3300049663 Bacteria 3253
148 Ga0501241_000380 3300049758 Bacteria 9714
149 Ga0501035_0010762 3300049822 Bacteria 8471
150 Ga0501035_0017096 3300049822 Bacteria 6683
151 Ga0501035_0040587 3300049822 Bacteria 4204
152 Ga0501044_0015718 3300049823 Bacteria 8151
153 Ga0495601_0006365 3300053077 Bacteria 6904
154 Ga0500616_0000626 3300053153 Bacteria 42914

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049663 Ga0501223_003822 Ga0501223_003822_260_2254 623
2 3300042876 Ga0451577_0000034 Ga0451577_0000034_166712_168670 635
3 3300044673 Ga0453683_0000057 Ga0453683_0000057_139973_141931 635
4 3300044712 Ga0453684_0000098 Ga0453684_0000098_166712_168670 635
5 3300045051 Ga0451576_0000036 Ga0451576_0000036_207514_209472 635
6 3300009553 Ga0105249_10064514 Ga0105249_100645141 637
7 3300042876 Ga0451577_0000983 Ga0451577_0000983_25898_27853 640
8 3300044712 Ga0453684_0000574 Ga0453684_0000574_109246_111201 640
9 3300045051 Ga0451576_0000411 Ga0451576_0000411_26106_28061 640
10 3300044673 Ga0453683_0000032 Ga0453683_0000032_127158_129116 643
11 3300044712 Ga0453684_0055249 Ga0453684_0055249_1485_3446 643
12 3300005353 Ga0070669_100086250 Ga0070669_1000862501 646
13 3300005844 Ga0068862_100038686 Ga0068862_1000386862 646
14 3300025923 Ga0207681_10034656 Ga0207681_100346562 646
15 3300028380 Ga0268265_10067583 Ga0268265_100675832 646
16 3300005347 Ga0070668_100061204 Ga0070668_1000612042 647
17 3300005356 Ga0070674_100001118 Ga0070674_1000011187 647
18 3300005718 Ga0068866_10002962 Ga0068866_100029624 647
19 3300009148 Ga0105243_10017292 Ga0105243_100172922 647
20 3300042876 Ga0451577_0028886 Ga0451577_0028886_3044_4999 648
21 3300044712 Ga0453684_0000148 Ga0453684_0000148_158069_160024 648
22 3300044712 Ga0453684_0001343 Ga0453684_0001343_6173_8128 648
23 3300041456 Ga0451795_1646656 Ga0451795_1646656_155_2158 649
24 3300042876 Ga0451577_0000159 Ga0451577_0000159_78429_80480 651
25 3300025921 Ga0207652_10000214 Ga0207652_100002143 652
26 3300032133 Ga0316583_10003992 Ga0316583_100039925 652
27 3300005336 Ga0070680_100005567 Ga0070680_1000055675 654
28 3300005455 Ga0070663_100031063 Ga0070663_1000310632 654
29 3300025909 Ga0207705_10007257 Ga0207705_100072574 654
30 3300026067 Ga0207678_10013503 Ga0207678_100135035 654
31 3300037312 Ga0395899_0017226 Ga0395899_0017226_2093_4267 654
32 3300037466 Ga0395898_0013466 Ga0395898_0013466_4317_6491 654
33 3300038443 Ga0395901_0028050 Ga0395901_0028050_2141_4315 654
34 iso_pu_bacteria 2890804823 2890805339 654
35 3300005458 Ga0070681_10023031 Ga0070681_100230313 655
36 3300014326 Ga0157380_10032538 Ga0157380_100325382 655
37 3300025949 Ga0207667_10029868 Ga0207667_100298684 655
38 3300026088 Ga0207641_10007635 Ga0207641_100076353 655
39 iso_pu_bacteria 2919509842 2919511624 655
40 3300036401 Ga0373937_0028251 Ga0373937_0028251_2541_4598 656
41 3300049758 Ga0501241_000380 Ga0501241_000380_5877_7883 656
42 iso_pu_bacteria 8036736890 8036737592 656
43 3300044712 Ga0453684_0018264 Ga0453684_0018264_8704_10713 657
44 3300013104 Ga0157370_10002079 Ga0157370_100020794 658
45 3300013102 Ga0157371_10002756 Ga0157371_100027563 659
46 3300049569 Ga0501032_0005010 Ga0501032_0005010_3540_5579 659
47 3300049570 Ga0501033_0000061 Ga0501033_0000061_4427_6466 659
48 3300049571 Ga0501034_0007335 Ga0501034_0007335_4718_6757 659
49 3300049572 Ga0501036_0007906 Ga0501036_0007906_1783_3822 659
50 3300049574 Ga0501038_0019077 Ga0501038_0019077_2777_4816 659
51 3300049575 Ga0501039_0003293 Ga0501039_0003293_5289_7328 659
52 3300049579 Ga0501043_0003218 Ga0501043_0003218_5307_7346 659
53 3300049822 Ga0501035_0017096 Ga0501035_0017096_2452_4491 659
54 3300049823 Ga0501044_0015718 Ga0501044_0015718_1526_3565 659
55 3300005289 Ga0065704_10071123 Ga0065704_100711238 660
56 3300013104 Ga0157370_10082657 Ga0157370_100826572 660
57 3300028573 Ga0265334_10013163 Ga0265334_100131631 660
58 3300031731 Ga0307405_10000001 Ga0307405_100000011473 660
59 3300032004 Ga0307414_10003936 Ga0307414_100039367 660
60 3300049822 Ga0501035_0010762 Ga0501035_0010762_5356_7380 660
61 3300005354 Ga0070675_100052102 Ga0070675_1000521021 661
62 3300025926 Ga0207659_10060015 Ga0207659_100600151 661
63 3300047472 Ga0495686_0000814 Ga0495686_0000814_1900_3984 661
64 3300005331 Ga0070670_100004632 Ga0070670_1000046322 663
65 3300005335 Ga0070666_10002421 Ga0070666_100024214 663
66 3300005338 Ga0068868_100001057 Ga0068868_10000105711 663
67 3300005344 Ga0070661_100081495 Ga0070661_1000814952 663
68 3300005355 Ga0070671_100008556 Ga0070671_1000085565 663
69 3300005365 Ga0070688_100016259 Ga0070688_1000162592 663
70 3300005367 Ga0070667_100001791 Ga0070667_10000179112 663
71 3300005564 Ga0070664_100000857 Ga0070664_1000008574 663
72 3300005614 Ga0068856_100044558 Ga0068856_1000445583 663
73 3300005615 Ga0070702_100002930 Ga0070702_1000029304 663
74 3300005618 Ga0068864_100014325 Ga0068864_1000143253 663
75 3300005841 Ga0068863_100003168 Ga0068863_1000031684 663
76 3300005843 Ga0068860_100011464 Ga0068860_1000114644 663
77 3300009098 Ga0105245_10009988 Ga0105245_100099883 663
78 3300009101 Ga0105247_10002907 Ga0105247_100029078 663
79 3300009177 Ga0105248_10008464 Ga0105248_100084645 663
80 3300010375 Ga0105239_10044108 Ga0105239_100441083 663
81 3300011119 Ga0105246_10003898 Ga0105246_100038982 663
82 3300013296 Ga0157374_10032591 Ga0157374_100325912 663
83 3300013297 Ga0157378_10111821 Ga0157378_101118212 663
84 3300013306 Ga0163162_10006112 Ga0163162_100061123 663
85 3300013308 Ga0157375_10013761 Ga0157375_100137615 663
86 3300014326 Ga0157380_10000033 Ga0157380_100000336 663
87 3300026088 Ga0207641_10011043 Ga0207641_100110432 663
88 3300026095 Ga0207676_10007710 Ga0207676_100077102 663
89 3300028381 Ga0268264_10045502 Ga0268264_100455021 663
90 3300031251 Ga0265327_10000090 Ga0265327_10000090106 663
91 3300048907 Ga0496104_0017428 Ga0496104_0017428_202_2277 663
92 3300048909 Ga0496106_0041941 Ga0496106_0041941_374_2449 663
93 3300048915 Ga0496112_0011121 Ga0496112_0011121_1586_3661 663
94 3300048917 Ga0496114_0000515 Ga0496114_0000515_8673_10748 663
95 iso_pu_bacteria 2739367866 2740034084 664
96 3300003320 rootH2_10054987 rootH2_100549872 665
97 3300047318 Ga0495636_0000317 Ga0495636_0000317_4022_6064 665
98 3300053077 Ga0495601_0006365 Ga0495601_0006365_2071_4149 665
99 3300003323 rootH1_10030105 rootH1_100301053 666
100 3300003323 rootH1_10279829 rootH1_102798292 666
101 3300005339 Ga0070660_100013641 Ga0070660_1000136412 666
102 3300005366 Ga0070659_100025845 Ga0070659_1000258453 666
103 3300005530 Ga0070679_100120098 Ga0070679_1001200981 666
104 3300025921 Ga0207652_10000051 Ga0207652_10000051110 666
105 3300037312 Ga0395899_0035073 Ga0395899_0035073_152_2254 666
106 3300037466 Ga0395898_0145288 Ga0395898_0145288_126_2228 666
107 iso_pu_bacteria 8055588893 8055589951 667
108 3300005289 Ga0065704_10070136 Ga0065704_1007013642 668
109 3300028379 Ga0268266_10004908 Ga0268266_1000490811 668
110 iso_pu_bacteria 2786546940 2788437061 669
111 3300031548 Ga0307408_100001373 Ga0307408_1000013731 670
112 3300031731 Ga0307405_10001885 Ga0307405_100018859 670
113 3300039062 Ga0400483_180509 Ga0400483_180509_17553_19598 670
114 3300049663 Ga0501223_001159 Ga0501223_001159_4150_6201 670
115 iso_pu_bacteria 2881955468 2881956733 670
116 3300005841 Ga0068863_100029924 Ga0068863_1000299243 671
117 3300013306 Ga0163162_10007296 Ga0163162_100072967 671
118 3300013307 Ga0157372_10003607 Ga0157372_100036076 671
119 3300046454 Ga0495592_0033733 Ga0495592_0033733_697_2760 671
120 3300005336 Ga0070680_100086960 Ga0070680_1000869602 672
121 3300026116 Ga0207674_10018090 Ga0207674_100180902 672
122 3300005327 Ga0070658_10023862 Ga0070658_100238622 673
123 3300005334 Ga0068869_100041217 Ga0068869_1000412173 673
124 3300005617 Ga0068859_100015913 Ga0068859_1000159133 673
125 3300005843 Ga0068860_100066146 Ga0068860_1000661461 673
126 3300006028 Ga0070717_10000149 Ga0070717_1000014920 673
127 3300006931 Ga0097620_100015913 Ga0097620_1000159135 673
128 3300025900 Ga0207710_10007689 Ga0207710_100076892 673
129 3300025903 Ga0207680_10016416 Ga0207680_100164162 673
130 3300025909 Ga0207705_10033273 Ga0207705_100332731 673
131 3300028381 Ga0268264_10005081 Ga0268264_100050811 673
132 3300031251 Ga0265327_10000270 Ga0265327_1000027076 673
133 3300005366 Ga0070659_100002676 Ga0070659_1000026766 674
134 3300009093 Ga0105240_10000047 Ga0105240_10000047176 674
135 3300025913 Ga0207695_10000010 Ga0207695_1000001063 674
136 3300025932 Ga0207690_10009082 Ga0207690_100090822 674
137 3300031251 Ga0265327_10016695 Ga0265327_100166953 674
138 3300046616 Ga0495668_0000450 Ga0495668_0000450_34464_36554 674
139 3300053153 Ga0500616_0000626 Ga0500616_0000626_36983_39073 674
140 2162886007 SwRhRL2b_contig_1663676 SwRhRL2b_0150.00002040 675
141 3300005289 Ga0065704_10079003 Ga0065704_100790033 675
142 3300005334 Ga0068869_100026729 Ga0068869_1000267291 675
143 3300005337 Ga0070682_100000129 Ga0070682_10000012959 675
144 3300005339 Ga0070660_100001323 Ga0070660_1000013238 675
145 3300005563 Ga0068855_100019773 Ga0068855_1000197734 675
146 3300009545 Ga0105237_10001909 Ga0105237_100019094 675
147 3300010375 Ga0105239_10003908 Ga0105239_100039088 675
148 3300013104 Ga0157370_10065922 Ga0157370_100659222 675
149 3300013307 Ga0157372_10018785 Ga0157372_100187853 675
150 3300013307 Ga0157372_10065545 Ga0157372_100655452 675
151 3300025914 Ga0207671_10000130 Ga0207671_100001309 675
152 3300025919 Ga0207657_10004225 Ga0207657_100042257 675
153 3300026089 Ga0207648_10004371 Ga0207648_100043714 675
154 3300031251 Ga0265327_10000010 Ga0265327_10000010408 675
155 3300031548 Ga0307408_100000340 Ga0307408_1000003406 675
156 3300031548 Ga0307408_100002675 Ga0307408_1000026752 675
157 3300044712 Ga0453684_0088692 Ga0453684_0088692_1325_3409 675
158 3300048917 Ga0496114_0001471 Ga0496114_0001471_15540_17639 675
159 3300048918 Ga0496115_0023251 Ga0496115_0023251_793_2880 675
160 3300049571 Ga0501034_0050109 Ga0501034_0050109_1475_3562 675
161 3300049822 Ga0501035_0040587 Ga0501035_0040587_1852_3939 675

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03571

Peptidase_M49

Peptidase family M49

279

520

0.9

PF03571

Peptidase_M49

Peptidase family M49

517

720

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
5na8-assembly2.cif.gz_B structure of dpp iii from bacteroides thetaiotaomicron in closed form 0.9823 26 675
5na8-assembly2.cif.gz_B structure of dpp iii from bacteroides thetaiotaomicron in closed form 0.9808 26 675
5na8-assembly1.cif.gz_A structure of dpp iii from bacteroides thetaiotaomicron in closed form 0.9761 28 674
5na8-assembly1.cif.gz_A structure of dpp iii from bacteroides thetaiotaomicron in closed form 0.9687 28 674
5zum-assembly1.cif.gz_B structure of dipeptidyl-peptidase iii from corallococcus sp. strain egb 0.8745 35 633
ID Description Score Start End Superfamily
5e2qA02 Alpha Beta;2-Layer Sandwich;Fructose-1,6-Bisphosphatase; Chain A, domain 1; 0.9635 242 408 3.30.540.30
af_Q96F24_1_93_1.20.58.80 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.7728 245 287 1.20.58.80
af_A0A1D8PQB4_223_346_3.30.540.30 Alpha Beta;2-Layer Sandwich;Fructose-1,6-Bisphosphatase; Chain A, domain 1; 0.7711 209 329 3.30.540.30
af_A0A1D6QCD2_379_579_3.30.540.30 Alpha Beta;2-Layer Sandwich;Fructose-1,6-Bisphosphatase; Chain A, domain 1; 0.7634 203 410 3.30.540.30
5e2qA02 Alpha Beta;2-Layer Sandwich;Fructose-1,6-Bisphosphatase; Chain A, domain 1; 0.7499 242 408 3.30.540.30
ID Description Score Start End GO Terms
AF-A0A3C0B6K4-F1-model_v4 Dihydrofolate reductase 0.9904 303 572 GO:0016787
GO:0046872
AF-A0A432K7G6-F1-model_v4 Dihydrofolate reductase 0.9873 26 326 GO:0016787
GO:0046872
AF-A0A359AX21-F1-model_v4 Dihydrofolate reductase 0.9869 252 402 GO:0016787
GO:0046872
AF-A0A3C0B6K4-F1-model_v4 Dihydrofolate reductase 0.9868 303 572 GO:0016787
GO:0046872
AF-A0A833AUC4-F1-model_v4 deleted 0.9859 60 675

Feature Viewer

pLDDT pTM Quality
92.12 0.91 High
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Predicted Structure (AlphaFold2)

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