F229016

General Info

Members Datasets Scaffolds Average Seq Length
158 131 158 124

Family's Representative Sequence

Representative Sequence 3300005355|Ga0070671_100635560|Ga0070671_1006355603
Length 132
Sequence MPVLGIGGLFFRARDPDALAAWYREHLGVGAGCVATEGAVPQEWSWQVEGGPVVFTPFPATTDYFAADKQFMLNLRVRDLEALLRQLDSGGIAITTRPEWNDPAIGHFARIHDPEGNPIELWEPPAQPSTAT

Samples

Sample ID Description Type Environment
1 2643221962 Aeromicrobium sp. Root344 Isolate Unclassified
2 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
19 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
31 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
32 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300012490 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.4.old.040610 Metagenome Rhizosphere
44 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
45 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
52 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
53 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
54 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
55 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
78 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
79 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
80 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
81 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
82 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
83 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
84 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
85 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
86 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
87 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
88 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
89 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
90 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
91 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
92 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
93 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
94 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
95 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
96 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
97 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
98 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
99 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
100 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
101 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
102 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
103 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
104 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
105 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
106 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
107 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
108 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
109 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
110 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
111 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
112 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
113 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
114 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
115 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
116 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
117 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
118 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
120 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
121 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
122 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
123 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
124 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
125 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
126 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
127 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
128 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
129 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
130 3300053144 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 endosphere Metagenome Endosphere
131 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.37
Metatranscriptomes 0
Isolates 0.63

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.72
Nodule 0
Rhizoplane 7.59
Rhizosphere 64.56
Stem 0
Stem Tuber 0
Unclassified 10.13

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25165J46597_1000039 3300003214 Bacteria 281327
2 rootH1_10011519 3300003316 Bacteria 1319
3 rootH1_10011519 3300003323 Bacteria 7301
4 Ga0065707_10969917 3300005295 Bacteria 547
5 Ga0070658_10014612 3300005327 Bacteria 6301
6 Ga0070676_10869607 3300005328 Bacteria 669
7 Ga0070666_10000016 3300005335 Bacteria 198246
8 Ga0070689_100103352 3300005340 Bacteria 2258
9 Ga0070661_100023008 3300005344 Bacteria 4464
10 Ga0070669_100165485 3300005353 Bacteria 1721
11 Ga0070671_100635560 3300005355 Bacteria 924
12 Ga0070673_100307249 3300005364 Bacteria 1398
13 Ga0070667_100013038 3300005367 Bacteria 6870
14 Ga0070681_11252265 3300005458 Bacteria 664
15 Ga0070685_10225810 3300005466 Bacteria 1229
16 Ga0070679_100325406 3300005530 Bacteria 1486
17 Ga0068853_101582015 3300005539 Bacteria 635
18 Ga0070686_100474784 3300005544 Bacteria 966
19 Ga0070693_100635690 3300005547 Bacteria 774
20 Ga0070665_100067848 3300005548 Bacteria 3576
21 Ga0068856_100273190 3300005614 Bacteria 1706
22 Ga0068856_100815282 3300005614 Bacteria 953
23 Ga0068859_100257230 3300005617 Bacteria 1837
24 Ga0068859_101214115 3300005617 Bacteria 830
25 Ga0068864_100003961 3300005618 Bacteria 12198
26 Ga0068861_101258342 3300005719 Bacteria 718
27 Ga0068863_100003472 3300005841 Bacteria 15545
28 Ga0068863_102591010 3300005841 Bacteria 516
29 Ga0068858_100002769 3300005842 Bacteria 17616
30 Ga0068860_100005276 3300005843 Bacteria 13115
31 Ga0068860_100034708 3300005843 Bacteria 4839
32 Ga0068860_101167690 3300005843 Bacteria 790
33 Ga0068862_100000461 3300005844 Bacteria 44027
34 Ga0068862_100804605 3300005844 Bacteria 918
35 Ga0081455_10060142 3300005937 Bacteria 3204
36 Ga0075365_10083837 3300006038 Bacteria 2162
37 Ga0075365_11176559 3300006038 Bacteria 539
38 Ga0075365_11323639 3300006038 Bacteria 506
39 Ga0075368_10102287 3300006042 Bacteria 1177
40 Ga0075363_100238781 3300006048 Bacteria 1044
41 Ga0075364_10058300 3300006051 Bacteria 2530
42 Ga0075364_10140735 3300006051 Bacteria 1623
43 Ga0075364_10145742 3300006051 Bacteria 1594
44 Ga0075364_10962265 3300006051 Bacteria 581
45 Ga0075362_10024212 3300006177 Bacteria 2574
46 Ga0068871_100021203 3300006358 Bacteria 4990
47 Ga0097620_100257232 3300006931 Bacteria 1837
48 Ga0097620_101214142 3300006931 Bacteria 830
49 Ga0105240_10016911 3300009093 Bacteria 9858
50 Ga0105247_10001070 3300009101 Bacteria 20440
51 Ga0105248_10011106 3300009177 Bacteria 9936
52 Ga0105248_11529744 3300009177 Bacteria 755
53 Ga0105238_10000148 3300009551 Bacteria 77122
54 Ga0105249_10000043 3300009553 Bacteria 192155
55 Ga0105249_10428142 3300009553 Bacteria 1358
56 Ga0105239_10016154 3300010375 Bacteria 8259
57 Ga0157322_1029622 3300012490 Unclassified 577
58 Ga0157370_10173125 3300013104 Bacteria 2006
59 Ga0157374_10047973 3300013296 Bacteria 3962
60 Ga0157378_10055420 3300013297 Bacteria 3531
61 Ga0163162_10051838 3300013306 Bacteria 4119
62 Ga0163162_10167642 3300013306 Bacteria 2320
63 Ga0163162_13127317 3300013306 Bacteria 531
64 Ga0157372_11055774 3300013307 Bacteria 940
65 Ga0157375_10291026 3300013308 Bacteria 1796
66 Ga0163163_10681275 3300014325 Bacteria 1092
67 Ga0157380_10075011 3300014326 Bacteria 2748
68 Ga0157379_10425348 3300014968 Bacteria 1223
69 Ga0157379_11025169 3300014968 Bacteria 788
70 Ga0209437_104786 3300025233 Bacteria 2355
71 Ga0209233_1000052 3300025261 Bacteria 445813
72 Ga0209455_1024277 3300025272 Bacteria 1122
73 Ga0207710_10004462 3300025900 Bacteria 6107
74 Ga0207688_10224557 3300025901 Bacteria 1132
75 Ga0207680_10000003 3300025903 Bacteria 925264
76 Ga0207705_10034866 3300025909 Bacteria 3599
77 Ga0207695_10015070 3300025913 Bacteria 9119
78 Ga0207649_10015123 3300025920 Bacteria 4333
79 Ga0207652_10064725 3300025921 Bacteria 3164
80 Ga0207681_10103901 3300025923 Bacteria 2054
81 Ga0207694_10000555 3300025924 Bacteria 33840
82 Ga0207687_10236558 3300025927 Bacteria 1445
83 Ga0207644_10220935 3300025931 Bacteria 1502
84 Ga0207711_10006361 3300025941 Bacteria 9956
85 Ga0207711_11579126 3300025941 Bacteria 599
86 Ga0207712_10000057 3300025961 Bacteria 142874
87 Ga0207712_10284527 3300025961 Bacteria 1350
88 Ga0207703_10000319 3300026035 Bacteria 52182
89 Ga0207702_10453572 3300026078 Bacteria 1244
90 Ga0207641_10002843 3300026088 Bacteria 15732
91 Ga0207676_10001621 3300026095 Bacteria 16588
92 Ga0207698_12253551 3300026142 Bacteria 557
93 Ga0268266_10000011 3300028379 Bacteria 757403
94 Ga0268265_10000120 3300028380 Bacteria 98362
95 Ga0268265_10665374 3300028380 Bacteria 1002
96 Ga0268264_10003978 3300028381 Bacteria 12648
97 Ga0307517_10161633 3300028786 Unclassified 1501
98 Ga0307515_10671259 3300028794 Bacteria 650
99 Ga0265327_10100530 3300031251 Bacteria 1396
100 Ga0307513_10620674 3300031456 Bacteria 789
101 Ga0307409_100401737 3300031995 Bacteria 1309
102 Ga0307414_10000398 3300032004 Bacteria 23554
103 Ga0307414_10190793 3300032004 Bacteria 1658
104 Ga0307510_10001342 3300033180 Bacteria 26840
105 Ga0307510_10007955 3300033180 Bacteria 12616
106 Ga0395898_0650846 3300037466 Bacteria 996
107 Ga0395905_0203482 3300037471 Bacteria 1856
108 Ga0395901_0036789 3300038443 Bacteria 5061
109 Ga0451797_0955085 3300041453 Bacteria 953
110 Ga0451837_1868446 3300041494 Bacteria 1227
111 Ga0495638_0001273 3300046460 Bacteria 23502
112 Ga0495650_0000075 3300046471 Bacteria 250589
113 Ga0495606_0016119 3300046507 Bacteria 5718
114 Ga0495663_0016454 3300046525 Bacteria 2090
115 Ga0495633_0564432 3300046558 Bacteria 512
116 Ga0495625_0000293 3300046660 Bacteria 77329
117 Ga0495625_0008200 3300046660 Bacteria 8942
118 Ga0495669_0081527 3300046684 Bacteria 1485
119 Ga0495670_0036969 3300046691 Bacteria 2433
120 Ga0495671_0006264 3300046692 Bacteria 6893
121 Ga0495680_0478878 3300047322 Bacteria 848
122 Ga0495684_0561177 3300047471 Bacteria 776
123 Ga0495686_0043718 3300047472 Bacteria 2839
124 Ga0496100_0243633 3300048903 Bacteria 1327
125 Ga0496101_0108014 3300048904 Bacteria 2091
126 Ga0496102_0147586 3300048905 Bacteria 2208
127 Ga0496103_0023512 3300048906 Bacteria 3717
128 Ga0496106_0692629 3300048909 Bacteria 812
129 Ga0496107_0893935 3300048910 Bacteria 647
130 Ga0496108_0062826 3300048911 Bacteria 3127
131 Ga0496109_0032897 3300048912 Bacteria 4665
132 Ga0496113_0163781 3300048916 Bacteria 1759
133 Ga0496114_1795890 3300048917 Bacteria 501
134 Ga0496115_0032386 3300048918 Bacteria 4124
135 Ga0496117_0035236 3300048920 Bacteria 3759
136 Ga0496118_0007287 3300048921 Bacteria 11777
137 Ga0496118_0420313 3300048921 Bacteria 688
138 Ga0496121_0038272 3300048924 Bacteria 4251
139 Ga0496121_0051231 3300048924 Bacteria 3479
140 Ga0496123_0474508 3300048926 Bacteria 552
141 Ga0496125_0071068 3300048928 Bacteria 2721
142 Ga0496126_0098587 3300048929 Bacteria 2560
143 Ga0501034_0399966 3300049571 Bacteria 1296
144 Ga0501047_0139786 3300049581 Bacteria 2301
145 nmdc:mga03683_18580_c1 3300050489 Bacteria 2644
146 nmdc:mga00v17_101917_c1 3300050491 Bacteria 1813
147 nmdc:mga00v17_630070_c1 3300050491 Bacteria 690
148 nmdc:mga0yw44_107056_c1 3300050492 Bacteria 1788
149 nmdc:mga0yw44_1172717_c1 3300050492 Unclassified 518
150 nmdc:mga06z11_139959_c1 3300050494 Bacteria 1367
151 nmdc:mga07m45_527582_c1 3300050496 Bacteria 683
152 Ga0500635_0000866 3300053080 Bacteria 7380
153 Ga0500646_0008681 3300053090 Bacteria 2603
154 Ga0500647_0092977 3300053091 Bacteria 1443
155 Ga0500658_0003242 3300053134 Bacteria 6188
156 Ga0500559_0329399 3300053136 Bacteria 715
157 Ga0500585_112308 3300053144 Bacteria 976
158 Ga0500616_0178240 3300053153 Bacteria 959

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037466 Ga0395898_0650846 Ga0395898_0650846_477_875 111
2 3300038443 Ga0395901_0036789 Ga0395901_0036789_3792_4190 111
3 3300048920 Ga0496117_0035236 Ga0496117_0035236_313_657 114
4 3300048921 Ga0496118_0007287 Ga0496118_0007287_2484_2828 114
5 3300031456 Ga0307513_10620674 Ga0307513_106206741 115
6 3300048917 Ga0496114_1795890 Ga0496114_1795890_83_430 115
7 3300053080 Ga0500635_0000866 Ga0500635_0000866_5861_6208 115
8 3300013306 Ga0163162_13127317 Ga0163162_131273171 116
9 3300048926 Ga0496123_0474508 Ga0496123_0474508_150_500 116
10 3300005614 Ga0068856_100815282 Ga0068856_1008152822 117
11 3300026078 Ga0207702_10453572 Ga0207702_104535722 117
12 3300005327 Ga0070658_10014612 Ga0070658_100146125 118
13 3300005328 Ga0070676_10869607 Ga0070676_108696071 118
14 3300005335 Ga0070666_10000016 Ga0070666_1000001668 118
15 3300005344 Ga0070661_100023008 Ga0070661_1000230082 118
16 3300005367 Ga0070667_100013038 Ga0070667_1000130383 118
17 3300005458 Ga0070681_11252265 Ga0070681_112522652 118
18 3300005466 Ga0070685_10225810 Ga0070685_102258102 118
19 3300005548 Ga0070665_100067848 Ga0070665_1000678483 118
20 3300005614 Ga0068856_100273190 Ga0068856_1002731902 118
21 3300005841 Ga0068863_102591010 Ga0068863_1025910102 118
22 3300005843 Ga0068860_100034708 Ga0068860_1000347082 118
23 3300005844 Ga0068862_100804605 Ga0068862_1008046052 118
24 3300005937 Ga0081455_10060142 Ga0081455_100601423 118
25 3300009093 Ga0105240_10016911 Ga0105240_100169116 118
26 3300009551 Ga0105238_10000148 Ga0105238_1000014812 118
27 3300013104 Ga0157370_10173125 Ga0157370_101731251 118
28 3300013296 Ga0157374_10047973 Ga0157374_100479737 118
29 3300013306 Ga0163162_10051838 Ga0163162_100518382 118
30 3300025901 Ga0207688_10224557 Ga0207688_102245572 118
31 3300025903 Ga0207680_10000003 Ga0207680_10000003589 118
32 3300025909 Ga0207705_10034866 Ga0207705_100348663 118
33 3300025913 Ga0207695_10015070 Ga0207695_100150705 118
34 3300025920 Ga0207649_10015123 Ga0207649_100151233 118
35 3300025924 Ga0207694_10000555 Ga0207694_1000055511 118
36 3300028379 Ga0268266_10000011 Ga0268266_10000011537 118
37 3300028380 Ga0268265_10665374 Ga0268265_106653742 118
38 3300028786 Ga0307517_10161633 Ga0307517_101616332 118
39 3300028794 Ga0307515_10671259 Ga0307515_106712591 118
40 3300031251 Ga0265327_10100530 Ga0265327_101005302 118
41 3300032004 Ga0307414_10190793 Ga0307414_101907931 118
42 3300033180 Ga0307510_10001342 Ga0307510_100013423 118
43 3300033180 Ga0307510_10007955 Ga0307510_100079554 118
44 3300041453 Ga0451797_0955085 Ga0451797_0955085_519_884 118
45 3300041494 Ga0451837_1868446 Ga0451837_1868446_143_508 118
46 3300046471 Ga0495650_0000075 Ga0495650_0000075_25697_26053 118
47 3300046507 Ga0495606_0016119 Ga0495606_0016119_357_713 118
48 3300046558 Ga0495633_0564432 Ga0495633_0564432_101_463 118
49 3300046660 Ga0495625_0008200 Ga0495625_0008200_1580_1936 118
50 3300048921 Ga0496118_0420313 Ga0496118_0420313_230_586 118
51 3300048924 Ga0496121_0051231 Ga0496121_0051231_1829_2185 118
52 3300048928 Ga0496125_0071068 Ga0496125_0071068_2017_2373 118
53 3300048929 Ga0496126_0098587 Ga0496126_0098587_626_982 118
54 3300049571 Ga0501034_0399966 Ga0501034_0399966_454_810 118
55 3300053090 Ga0500646_0008681 Ga0500646_0008681_1833_2189 118
56 3300053091 Ga0500647_0092977 Ga0500647_0092977_46_402 118
57 3300005340 Ga0070689_100103352 Ga0070689_1001033522 120
58 3300010375 Ga0105239_10016154 Ga0105239_100161548 120
59 3300049581 Ga0501047_0139786 Ga0501047_0139786_1394_1777 120
60 3300013308 Ga0157375_10291026 Ga0157375_102910263 122
61 3300037471 Ga0395905_0203482 Ga0395905_0203482_1408_1779 122
62 3300046684 Ga0495669_0081527 Ga0495669_0081527_83_454 122
63 3300003316 rootH1_10011519 rootH1_100115192 126
64 3300005618 Ga0068864_100003961 Ga0068864_1000039617 126
65 3300005719 Ga0068861_101258342 Ga0068861_1012583422 126
66 3300005842 Ga0068858_100002769 Ga0068858_10000276912 126
67 3300006038 Ga0075365_10083837 Ga0075365_100838371 126
68 3300006038 Ga0075365_11323639 Ga0075365_113236391 126
69 3300006042 Ga0075368_10102287 Ga0075368_101022872 126
70 3300006048 Ga0075363_100238781 Ga0075363_1002387812 126
71 3300006051 Ga0075364_10140735 Ga0075364_101407352 126
72 3300006051 Ga0075364_10145742 Ga0075364_101457421 126
73 3300009177 Ga0105248_10011106 Ga0105248_100111064 126
74 3300009553 Ga0105249_10428142 Ga0105249_104281422 126
75 3300013306 Ga0163162_10167642 Ga0163162_101676422 126
76 3300014325 Ga0163163_10681275 Ga0163163_106812751 126
77 3300025941 Ga0207711_10006361 Ga0207711_100063614 126
78 3300025961 Ga0207712_10284527 Ga0207712_102845272 126
79 3300026035 Ga0207703_10000319 Ga0207703_100003195 126
80 3300026095 Ga0207676_10001621 Ga0207676_1000162110 126
81 3300046460 Ga0495638_0001273 Ga0495638_0001273_21277_21657 126
82 3300047472 Ga0495686_0043718 Ga0495686_0043718_2085_2465 126
83 3300050492 nmdc:mga0yw44_107056_c1 nmdc:mga0yw44_107056_c1_69_449 126
84 3300050494 nmdc:mga06z11_139959_c1 nmdc:mga06z11_139959_c1_825_1205 126
85 3300053144 Ga0500585_112308 Ga0500585_112308_393_773 126
86 3300053153 Ga0500616_0178240 Ga0500616_0178240_73_453 126
87 3300003214 JGI25165J46597_1000039 JGI25165J46597_1000039201 127
88 3300005295 Ga0065707_10969917 Ga0065707_109699171 127
89 3300005353 Ga0070669_100165485 Ga0070669_1001654852 127
90 3300005355 Ga0070671_100635560 Ga0070671_1006355603 127
91 3300005364 Ga0070673_100307249 Ga0070673_1003072492 127
92 3300005530 Ga0070679_100325406 Ga0070679_1003254062 127
93 3300005539 Ga0068853_101582015 Ga0068853_1015820151 127
94 3300005544 Ga0070686_100474784 Ga0070686_1004747842 127
95 3300005547 Ga0070693_100635690 Ga0070693_1006356902 127
96 3300005617 Ga0068859_100257230 Ga0068859_1002572302 127
97 3300005617 Ga0068859_101214115 Ga0068859_1012141152 127
98 3300005841 Ga0068863_100003472 Ga0068863_1000034726 127
99 3300005843 Ga0068860_100005276 Ga0068860_10000527614 127
100 3300005843 Ga0068860_101167690 Ga0068860_1011676901 127
101 3300005844 Ga0068862_100000461 Ga0068862_10000046129 127
102 3300006038 Ga0075365_11176559 Ga0075365_111765591 127
103 3300006051 Ga0075364_10058300 Ga0075364_100583002 127
104 3300006051 Ga0075364_10962265 Ga0075364_109622651 127
105 3300006177 Ga0075362_10024212 Ga0075362_100242124 127
106 3300006358 Ga0068871_100021203 Ga0068871_1000212032 127
107 3300006931 Ga0097620_100257232 Ga0097620_1002572322 127
108 3300006931 Ga0097620_101214142 Ga0097620_1012141422 127
109 3300009101 Ga0105247_10001070 Ga0105247_100010708 127
110 3300009177 Ga0105248_11529744 Ga0105248_115297441 127
111 3300009553 Ga0105249_10000043 Ga0105249_10000043165 127
112 3300012490 Ga0157322_1029622 Ga0157322_10296222 127
113 3300013297 Ga0157378_10055420 Ga0157378_100554203 127
114 3300013307 Ga0157372_11055774 Ga0157372_110557742 127
115 3300014326 Ga0157380_10075011 Ga0157380_100750113 127
116 3300014968 Ga0157379_10425348 Ga0157379_104253482 127
117 3300014968 Ga0157379_11025169 Ga0157379_110251691 127
118 3300025233 Ga0209437_104786 Ga0209437_1047863 127
119 3300025261 Ga0209233_1000052 Ga0209233_1000052355 127
120 3300025272 Ga0209455_1024277 Ga0209455_10242772 127
121 3300025900 Ga0207710_10004462 Ga0207710_100044622 127
122 3300025921 Ga0207652_10064725 Ga0207652_100647251 127
123 3300025923 Ga0207681_10103901 Ga0207681_101039012 127
124 3300025927 Ga0207687_10236558 Ga0207687_102365582 127
125 3300025931 Ga0207644_10220935 Ga0207644_102209352 127
126 3300025941 Ga0207711_11579126 Ga0207711_115791262 127
127 3300025961 Ga0207712_10000057 Ga0207712_1000005772 127
128 3300026088 Ga0207641_10002843 Ga0207641_100028439 127
129 3300026142 Ga0207698_12253551 Ga0207698_122535511 127
130 3300028380 Ga0268265_10000120 Ga0268265_1000012032 127
131 3300028381 Ga0268264_10003978 Ga0268264_1000397813 127
132 3300031995 Ga0307409_100401737 Ga0307409_1004017372 127
133 3300032004 Ga0307414_10000398 Ga0307414_100003983 127
134 3300046525 Ga0495663_0016454 Ga0495663_0016454_1613_1999 127
135 3300046660 Ga0495625_0000293 Ga0495625_0000293_75244_75630 127
136 3300046691 Ga0495670_0036969 Ga0495670_0036969_1136_1519 127
137 3300046692 Ga0495671_0006264 Ga0495671_0006264_5460_5846 127
138 3300047322 Ga0495680_0478878 Ga0495680_0478878_43_435 127
139 3300047471 Ga0495684_0561177 Ga0495684_0561177_179_571 127
140 3300048903 Ga0496100_0243633 Ga0496100_0243633_337_720 127
141 3300048904 Ga0496101_0108014 Ga0496101_0108014_315_698 127
142 3300048905 Ga0496102_0147586 Ga0496102_0147586_1768_2151 127
143 3300048906 Ga0496103_0023512 Ga0496103_0023512_2199_2582 127
144 3300048909 Ga0496106_0692629 Ga0496106_0692629_114_497 127
145 3300048910 Ga0496107_0893935 Ga0496107_0893935_245_628 127
146 3300048911 Ga0496108_0062826 Ga0496108_0062826_2315_2698 127
147 3300048912 Ga0496109_0032897 Ga0496109_0032897_310_693 127
148 3300048916 Ga0496113_0163781 Ga0496113_0163781_751_1134 127
149 3300048918 Ga0496115_0032386 Ga0496115_0032386_3620_4003 127
150 3300048924 Ga0496121_0038272 Ga0496121_0038272_3104_3490 127
151 3300050489 nmdc:mga03683_18580_c1 nmdc:mga03683_18580_c1_1225_1617 127
152 3300050491 nmdc:mga00v17_101917_c1 nmdc:mga00v17_101917_c1_90_485 127
153 3300050491 nmdc:mga00v17_630070_c1 nmdc:mga00v17_630070_c1_76_468 127
154 3300050492 nmdc:mga0yw44_1172717_c1 nmdc:mga0yw44_1172717_c1_17_409 127
155 3300050496 nmdc:mga07m45_527582_c1 nmdc:mga07m45_527582_c1_151_546 127
156 3300053134 Ga0500658_0003242 Ga0500658_0003242_2205_2588 127
157 3300053136 Ga0500559_0329399 Ga0500559_0329399_201_590 127
158 iso_pu_bacteria 2643221962 2645723452 127

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00903

Glyoxalase

Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

5

121

0.8

PF18029

Glyoxalase_6

Glyoxalase-like domain

8

122

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
6xi3-assembly1.cif.gz_AAA crystal structure of tetra-tandem repeat in extending region of large adhesion protein 0.8161 108 123
5umq-assembly1.cif.gz_A crystal structure of tnms1, an antibiotic binding protein from streptomyces sp. cb03234 0.7318 3 124
5ump-assembly1.cif.gz_B crystal structure of tnms3, an antibiotic binding protein from streptomyces sp. cb03234 0.7131 1 124
5umq-assembly1.cif.gz_A crystal structure of tnms1, an antibiotic binding protein from streptomyces sp. cb03234 0.7113 3 124
1ky5-assembly1.cif.gz_B d244e mutant s-adenosylhomocysteine hydrolase refined with noncrystallographic restraints 0.7104 93 122
ID Description Score Start End Superfamily
3m2oB02 Alpha Beta;2-Layer Sandwich;Signal recognition particle alu RNA binding heterodimer, srp9/1; 0.834 72 122 3.30.720.110
3itwA02 Alpha Beta;2-Layer Sandwich;Signal recognition particle alu RNA binding heterodimer, srp9/1; 0.7767 69 124 3.30.720.110
3m2oB02 Alpha Beta;2-Layer Sandwich;Signal recognition particle alu RNA binding heterodimer, srp9/1; 0.7741 72 122 3.30.720.110
3oajB02 Alpha Beta;Roll;2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1;2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.7699 68 125 3.10.180.10
af_P9WKQ3_98_165_3.30.720.110 Alpha Beta;2-Layer Sandwich;Signal recognition particle alu RNA binding heterodimer, srp9/1; 0.7548 71 127 3.30.720.110
ID Description Score Start End GO Terms
AF-A0A3D3SIC2-F1-model_v4 deleted 0.9463 64 127
AF-A0A3D3SIC2-F1-model_v4 deleted 0.9323 64 127
AF-A0A841L3K2-F1-model_v4 VOC domain-containing protein 0.8409 1 126
AF-N1MNS1-F1-model_v4 Glyoxalase family protein 0.8391 1 126
AF-A0A502G361-F1-model_v4 VOC family protein 0.8373 1 127

Feature Viewer

pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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