F185960

General Info

Members Datasets Scaffolds Average Seq Length
142 112 141 189

Family's Representative Sequence

Representative Sequence 3300025945|Ga0207679_10650327|Ga0207679_106503272
Length 217
Sequence MAVVRHSGQTFDFVNSKTPFMKRSSFLKFGIAVGSLLAASFNSNARSKSQKREDKGFKVDAGKDRFEKSISPFEGDAFYTKVSTKDTDGDMYVFESTRLKEGGPILHTHYETDEWWYVLQGEFLIKVGDKTYSAKTGDLVFGPRMVPHTFAKIGKEEAKLIICHQPAGKMEEYFKKLSEGIATNMSEEERSNLRKAHGFEKVGPSINVFKTVTRPTY

Samples

Sample ID Description Type Environment
1 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
14 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
25 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
26 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
28 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
32 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
35 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
38 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
39 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
55 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
56 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
57 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
58 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
59 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
60 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
61 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
62 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
63 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
64 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
65 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
66 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
67 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
68 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
69 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
70 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
71 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
72 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
73 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
74 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
75 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
76 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
77 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
78 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
79 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
80 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
81 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
82 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
83 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
84 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
85 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
86 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
87 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
88 3300049651 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_A_0_drought Metagenome Rhizosphere
89 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
90 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
91 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
92 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
93 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
94 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
95 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
96 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
97 3300049760 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_A_4_control Metagenome Rhizosphere
98 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
99 3300049769 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_B_4_drought Metagenome Rhizosphere
100 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
101 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
102 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
103 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
104 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
105 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
106 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
107 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
108 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
109 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
110 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
111 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
112 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.3
Metatranscriptomes 0
Isolates 0.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.04
Nodule 0
Rhizoplane 0
Rhizosphere 80.28
Stem 0
Stem Tuber 0
Unclassified 12.68

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10167989 3300003316 Bacteria 1304
2 rootH2_10001460 3300003320 Bacteria 10747
3 rootH2_10032333 3300003320 Bacteria 7833
4 rootL2_10099533 3300003322 Bacteria 9736
5 rootL2_10174056 3300003322 Bacteria 3340
6 rootH1_10005012 3300003323 Bacteria 8906
7 rootH1_10129459 3300003323 Bacteria 17957
8 rootH1_10299874 3300003323 Bacteria 2042
9 Ga0065714_10069356 3300005288 Bacteria 4245
10 Ga0070658_10229905 3300005327 Bacteria 1570
11 Ga0070676_10110475 3300005328 Bacteria 1711
12 Ga0070676_10530370 3300005328 Bacteria 840
13 Ga0068869_100455832 3300005334 Bacteria 1061
14 Ga0070668_100012093 3300005347 Bacteria 6428
15 Ga0070667_100931983 3300005367 Bacteria 809
16 Ga0068867_100051107 3300005459 Bacteria 3048
17 Ga0068853_100347369 3300005539 Bacteria 1379
18 Ga0070686_100486303 3300005544 Bacteria 955
19 Ga0068855_100149025 3300005563 Bacteria 2661
20 Ga0068857_100270841 3300005577 Unclassified 1560
21 Ga0068852_100188872 3300005616 Bacteria 1942
22 Ga0068866_10443168 3300005718 Bacteria 847
23 Ga0068860_100113475 3300005843 Bacteria 2591
24 Ga0068862_101148933 3300005844 Bacteria 773
25 Ga0075428_100020429 3300006844 Bacteria 7330
26 Ga0075430_100012234 3300006846 Bacteria 7304
27 Ga0075431_100413082 3300006847 Bacteria 1349
28 Ga0075429_101032515 3300006880 Bacteria 718
29 Ga0068865_100238203 3300006881 Bacteria 1430
30 Ga0114129_10009587 3300009147 Bacteria 13812
31 Ga0105242_10061023 3300009176 Bacteria 3100
32 Ga0105237_10004731 3300009545 Bacteria 15658
33 Ga0105237_10609500 3300009545 Unclassified 1099
34 Ga0105249_10091774 3300009553 Bacteria 2842
35 Ga0105239_11364422 3300010375 Unclassified 818
36 Ga0105239_11741367 3300010375 Bacteria 722
37 Ga0157371_10120275 3300013102 Bacteria 1867
38 Ga0157370_10013068 3300013104 Bacteria 8570
39 Ga0157370_10206116 3300013104 Bacteria 1823
40 Ga0157369_10101118 3300013105 Unclassified 3073
41 Ga0157378_10772716 3300013297 Bacteria 985
42 Ga0163162_10003270 3300013306 Bacteria 15507
43 Ga0157372_10105720 3300013307 Bacteria 3220
44 Ga0157375_10702635 3300013308 Bacteria 1165
45 Ga0157380_10622415 3300014326 Unclassified 1072
46 Ga0207671_10002193 3300025914 Bacteria 21198
47 Ga0207671_10006564 3300025914 Bacteria 10331
48 Ga0207671_10686878 3300025914 Bacteria 814
49 Ga0207657_10576966 3300025919 Bacteria 878
50 Ga0207650_10055558 3300025925 Bacteria 2939
51 Ga0207686_10239089 3300025934 Bacteria 1321
52 Ga0207689_10002890 3300025942 Bacteria 15844
53 Ga0207679_10650327 3300025945 Unclassified 953
54 Ga0207667_10138712 3300025949 Bacteria 2503
55 Ga0207712_10052058 3300025961 Bacteria 2866
56 Ga0207712_10069415 3300025961 Bacteria 2528
57 Ga0207712_10219850 3300025961 Bacteria 1518
58 Ga0207668_10430147 3300025972 Bacteria 1122
59 Ga0207639_10332197 3300026041 Bacteria 1353
60 Ga0207648_10068178 3300026089 Bacteria 3100
61 Ga0207674_10029643 3300026116 Bacteria 5759
62 Ga0207698_11586137 3300026142 Unclassified 670
63 Ga0268265_10370094 3300028380 Bacteria 1315
64 Ga0268264_10802708 3300028381 Bacteria 940
65 Ga0268264_11558749 3300028381 Bacteria 671
66 Ga0307515_10000778 3300028794 Bacteria 73451
67 Ga0307515_10002549 3300028794 Bacteria 39359
68 Ga0307515_10002855 3300028794 Bacteria 36754
69 Ga0307515_10028779 3300028794 Bacteria 9425
70 Ga0307515_10104229 3300028794 Unclassified 3391
71 Ga0307515_10454457 3300028794 Unclassified 896
72 Ga0307513_10118163 3300031456 Unclassified 2627
73 Ga0307513_10232794 3300031456 Bacteria 1654
74 Ga0307408_100172304 3300031548 Bacteria 1729
75 Ga0307508_10003452 3300031616 Bacteria 15994
76 Ga0307405_10372894 3300031731 Bacteria 1108
77 Ga0307413_10054854 3300031824 Bacteria 2421
78 Ga0307413_10185769 3300031824 Bacteria 1487
79 Ga0307410_10154150 3300031852 Bacteria 1714
80 Ga0307406_10698760 3300031901 Unclassified 846
81 Ga0307416_100596990 3300032002 Bacteria 1183
82 Ga0307411_10086027 3300032005 Bacteria 2180
83 Ga0307411_10712659 3300032005 Unclassified 875
84 Ga0307415_100082218 3300032126 Bacteria 2303
85 Ga0307510_10000191 3300033180 Bacteria 53108
86 Ga0395899_0039583 3300037312 Bacteria 3528
87 Ga0395900_0006210 3300037418 Bacteria 12474
88 Ga0439465_0062168 3300041413 Bacteria 1239
89 Ga0451577_0081488 3300042876 Bacteria 2886
90 Ga0453684_0000889 3300044712 Bacteria 99678
91 Ga0495650_0061506 3300046471 Bacteria 1504
92 Ga0495585_0000902 3300046492 Bacteria 25158
93 Ga0495606_0153606 3300046507 Bacteria 1349
94 Ga0495606_0190361 3300046507 Bacteria 1176
95 Ga0495606_0209136 3300046507 Bacteria 1106
96 Ga0495610_0127619 3300046512 Bacteria 1108
97 Ga0495616_0010696 3300046513 Bacteria 5298
98 Ga0495616_0170865 3300046513 Bacteria 972
99 Ga0495628_0301936 3300046516 Bacteria 1185
100 Ga0495648_0027654 3300046524 Bacteria 3792
101 Ga0495622_0092333 3300046557 Bacteria 1390
102 Ga0495668_0000003 3300046616 Bacteria 695023
103 Ga0495625_0000923 3300046660 Bacteria 39492
104 Ga0495625_0001822 3300046660 Bacteria 24395
105 Ga0495625_0011872 3300046660 Bacteria 7074
106 Ga0495625_0016699 3300046660 Bacteria 5766
107 Ga0495625_0067805 3300046660 Bacteria 2510
108 Ga0495625_0160379 3300046660 Bacteria 1507
109 Ga0495661_0001032 3300046665 Bacteria 24724
110 Ga0495658_0191081 3300046683 Bacteria 1273
111 Ga0495687_147757 3300047443 Bacteria 808
112 Ga0495673_0045593 3300047469 Bacteria 1948
113 Ga0495686_0000040 3300047472 Bacteria 301210
114 Ga0495686_0003620 3300047472 Bacteria 13251
115 Ga0495614_0015085 3300048089 Bacteria 3373
116 Ga0501300_000953 3300049523 Bacteria 4422
117 Ga0501201_019995 3300049651 Unclassified 704
118 Ga0501202_006005 3300049652 Bacteria 2162
119 Ga0501216_056014 3300049660 Bacteria 785
120 Ga0501233_121294 3300049668 Unclassified 707
121 Ga0501235_025605 3300049669 Bacteria 1320
122 Ga0501257_000954 3300049686 Bacteria 5834
123 Ga0501261_011092 3300049690 Bacteria 1196
124 Ga0501225_0018035 3300049705 Bacteria 1958
125 Ga0501245_037073 3300049708 Unclassified 826
126 Ga0501263_022396 3300049760 Unclassified 857
127 Ga0501264_000024 3300049761 Bacteria 23547
128 Ga0501272_008571 3300049769 Bacteria 1123
129 nmdc:mga05p37_110053_c1 3300050507 Unclassified 3389
130 nmdc:mga09592_20888_c1 3300050508 Bacteria 5392
131 nmdc:mga0qj67_190421_c1 3300050509 Bacteria 1667
132 Ga0500644_0047800 3300053088 Bacteria 1453
133 Ga0500646_0019818 3300053090 Bacteria 1782
134 Ga0500641_0000018 3300053096 Bacteria 132142
135 Ga0500608_006546 3300053122 Bacteria 4752
136 Ga0500618_000051 3300053125 Bacteria 104272
137 Ga0500559_0386633 3300053136 Unclassified 652
138 Ga0500604_0004524 3300053151 Unclassified 3685
139 Ga0500616_0000003 3300053153 Bacteria 1220687
140 Ga0500622_0000007 3300053156 Bacteria 425621
141 Ga0500627_0070054 3300053158 Bacteria 1553

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049660 Ga0501216_056014 Ga0501216_056014_302_769 155
2 3300049686 Ga0501257_000954 Ga0501257_000954_4643_5173 175
3 3300049761 Ga0501264_000024 Ga0501264_000024_2934_3464 175
4 3300053088 Ga0500644_0047800 Ga0500644_0047800_873_1403 175
5 3300053090 Ga0500646_0019818 Ga0500646_0019818_608_1138 175
6 3300053096 Ga0500641_0000018 Ga0500641_0000018_13957_14487 175
7 3300005544 Ga0070686_100486303 Ga0070686_1004863032 176
8 3300031548 Ga0307408_100172304 Ga0307408_1001723042 178
9 3300031731 Ga0307405_10372894 Ga0307405_103728942 178
10 3300031824 Ga0307413_10054854 Ga0307413_100548543 178
11 3300031852 Ga0307410_10154150 Ga0307410_101541502 178
12 3300031901 Ga0307406_10698760 Ga0307406_106987601 178
13 3300032002 Ga0307416_100596990 Ga0307416_1005969902 178
14 3300032005 Ga0307411_10086027 Ga0307411_100860272 178
15 3300032126 Ga0307415_100082218 Ga0307415_1000822182 178
16 3300042876 Ga0451577_0081488 Ga0451577_0081488_368_946 178
17 3300044712 Ga0453684_0000889 Ga0453684_0000889_368_946 178
18 3300049651 Ga0501201_019995 Ga0501201_019995_50_619 178
19 3300049652 Ga0501202_006005 Ga0501202_006005_274_843 178
20 3300049668 Ga0501233_121294 Ga0501233_121294_110_679 178
21 3300049669 Ga0501235_025605 Ga0501235_025605_560_1129 178
22 3300049690 Ga0501261_011092 Ga0501261_011092_213_782 178
23 3300049705 Ga0501225_0018035 Ga0501225_0018035_576_1145 178
24 3300049708 Ga0501245_037073 Ga0501245_037073_34_603 178
25 3300049760 Ga0501263_022396 Ga0501263_022396_132_701 178
26 3300049769 Ga0501272_008571 Ga0501272_008571_221_790 178
27 3300028381 Ga0268264_11558749 Ga0268264_115587491 179
28 3300028794 Ga0307515_10104229 Ga0307515_101042291 181
29 3300047443 Ga0495687_147757 Ga0495687_147757_120_668 181
30 3300046513 Ga0495616_0010696 Ga0495616_0010696_1768_2346 183
31 3300046660 Ga0495625_0011872 Ga0495625_0011872_1878_2456 183
32 3300048089 Ga0495614_0015085 Ga0495614_0015085_2161_2715 183
33 3300046660 Ga0495625_0067805 Ga0495625_0067805_259_834 184
34 3300005288 Ga0065714_10069356 Ga0065714_100693564 185
35 3300013308 Ga0157375_10702635 Ga0157375_107026352 185
36 3300041413 Ga0439465_0062168 Ga0439465_0062168_185_748 187
37 iso_pu_bacteria 2919437846 2919441832 187
38 3300003322 rootL2_10174056 rootL2_101740563 188
39 3300003323 rootH1_10129459 rootH1_1012945914 188
40 3300005563 Ga0068855_100149025 Ga0068855_1001490252 189
41 3300005616 Ga0068852_100188872 Ga0068852_1001888724 189
42 3300013104 Ga0157370_10206116 Ga0157370_102061162 189
43 3300013307 Ga0157372_10105720 Ga0157372_101057204 189
44 3300025949 Ga0207667_10138712 Ga0207667_101387123 189
45 3300037312 Ga0395899_0039583 Ga0395899_0039583_1894_2463 189
46 3300037418 Ga0395900_0006210 Ga0395900_0006210_1918_2487 189
47 3300005327 Ga0070658_10229905 Ga0070658_102299052 190
48 3300028794 Ga0307515_10002549 Ga0307515_100025497 190
49 3300028794 Ga0307515_10028779 Ga0307515_100287795 190
50 3300046660 Ga0495625_0016699 Ga0495625_0016699_23_598 190
51 3300046660 Ga0495625_0160379 Ga0495625_0160379_789_1361 190
52 3300053153 Ga0500616_0000003 Ga0500616_0000003_114293_114868 190
53 3300003316 rootH1_10167989 rootH1_101679892 191
54 3300003320 rootH2_10001460 rootH2_100014609 191
55 3300003320 rootH2_10032333 rootH2_100323333 191
56 3300003322 rootL2_10099533 rootL2_100995333 191
57 3300003323 rootH1_10005012 rootH1_100050123 191
58 3300003323 rootH1_10299874 rootH1_102998742 191
59 3300005328 Ga0070676_10110475 Ga0070676_101104751 191
60 3300005328 Ga0070676_10530370 Ga0070676_105303701 191
61 3300005334 Ga0068869_100455832 Ga0068869_1004558322 191
62 3300005347 Ga0070668_100012093 Ga0070668_1000120934 191
63 3300005367 Ga0070667_100931983 Ga0070667_1009319831 191
64 3300005459 Ga0068867_100051107 Ga0068867_1000511071 191
65 3300005539 Ga0068853_100347369 Ga0068853_1003473691 191
66 3300005577 Ga0068857_100270841 Ga0068857_1002708412 191
67 3300005718 Ga0068866_10443168 Ga0068866_104431681 191
68 3300005843 Ga0068860_100113475 Ga0068860_1001134752 191
69 3300005844 Ga0068862_101148933 Ga0068862_1011489331 191
70 3300006844 Ga0075428_100020429 Ga0075428_1000204295 191
71 3300006846 Ga0075430_100012234 Ga0075430_1000122344 191
72 3300006847 Ga0075431_100413082 Ga0075431_1004130822 191
73 3300006880 Ga0075429_101032515 Ga0075429_1010325151 191
74 3300006881 Ga0068865_100238203 Ga0068865_1002382032 191
75 3300009147 Ga0114129_10009587 Ga0114129_1000958714 191
76 3300009176 Ga0105242_10061023 Ga0105242_100610232 191
77 3300009545 Ga0105237_10004731 Ga0105237_100047317 191
78 3300009545 Ga0105237_10609500 Ga0105237_106095002 191
79 3300009553 Ga0105249_10091774 Ga0105249_100917743 191
80 3300010375 Ga0105239_11364422 Ga0105239_113644222 191
81 3300010375 Ga0105239_11741367 Ga0105239_117413671 191
82 3300013102 Ga0157371_10120275 Ga0157371_101202751 191
83 3300013104 Ga0157370_10013068 Ga0157370_100130685 191
84 3300013105 Ga0157369_10101118 Ga0157369_101011183 191
85 3300013297 Ga0157378_10772716 Ga0157378_107727162 191
86 3300013306 Ga0163162_10003270 Ga0163162_100032703 191
87 3300014326 Ga0157380_10622415 Ga0157380_106224151 191
88 3300025914 Ga0207671_10002193 Ga0207671_1000219312 191
89 3300025914 Ga0207671_10006564 Ga0207671_100065648 191
90 3300025914 Ga0207671_10686878 Ga0207671_106868782 191
91 3300025919 Ga0207657_10576966 Ga0207657_105769661 191
92 3300025925 Ga0207650_10055558 Ga0207650_100555584 191
93 3300025934 Ga0207686_10239089 Ga0207686_102390892 191
94 3300025942 Ga0207689_10002890 Ga0207689_100028903 191
95 3300025945 Ga0207679_10650327 Ga0207679_106503272 191
96 3300025961 Ga0207712_10052058 Ga0207712_100520582 191
97 3300025961 Ga0207712_10069415 Ga0207712_100694153 191
98 3300025961 Ga0207712_10219850 Ga0207712_102198502 191
99 3300025972 Ga0207668_10430147 Ga0207668_104301471 191
100 3300026041 Ga0207639_10332197 Ga0207639_103321971 191
101 3300026089 Ga0207648_10068178 Ga0207648_100681782 191
102 3300026116 Ga0207674_10029643 Ga0207674_100296433 191
103 3300026142 Ga0207698_11586137 Ga0207698_115861371 191
104 3300028380 Ga0268265_10370094 Ga0268265_103700942 191
105 3300028381 Ga0268264_10802708 Ga0268264_108027081 191
106 3300028794 Ga0307515_10000778 Ga0307515_1000077810 191
107 3300028794 Ga0307515_10002855 Ga0307515_1000285514 191
108 3300028794 Ga0307515_10454457 Ga0307515_104544572 191
109 3300031456 Ga0307513_10118163 Ga0307513_101181633 191
110 3300031456 Ga0307513_10232794 Ga0307513_102327942 191
111 3300031616 Ga0307508_10003452 Ga0307508_100034523 191
112 3300031824 Ga0307413_10185769 Ga0307413_101857691 191
113 3300032005 Ga0307411_10712659 Ga0307411_107126592 191
114 3300033180 Ga0307510_10000191 Ga0307510_1000019139 191
115 3300046471 Ga0495650_0061506 Ga0495650_0061506_468_1076 191
116 3300046492 Ga0495585_0000902 Ga0495585_0000902_8081_8659 191
117 3300046507 Ga0495606_0153606 Ga0495606_0153606_718_1299 191
118 3300046507 Ga0495606_0190361 Ga0495606_0190361_177_752 191
119 3300046507 Ga0495606_0209136 Ga0495606_0209136_38_616 191
120 3300046512 Ga0495610_0127619 Ga0495610_0127619_91_669 191
121 3300046513 Ga0495616_0170865 Ga0495616_0170865_266_844 191
122 3300046516 Ga0495628_0301936 Ga0495628_0301936_491_1069 191
123 3300046524 Ga0495648_0027654 Ga0495648_0027654_2712_3290 191
124 3300046557 Ga0495622_0092333 Ga0495622_0092333_143_721 191
125 3300046616 Ga0495668_0000003 Ga0495668_0000003_649677_650255 191
126 3300046660 Ga0495625_0000923 Ga0495625_0000923_35486_36094 191
127 3300046660 Ga0495625_0001822 Ga0495625_0001822_4652_5230 191
128 3300046665 Ga0495661_0001032 Ga0495661_0001032_19431_20009 191
129 3300046683 Ga0495658_0191081 Ga0495658_0191081_588_1166 191
130 3300047469 Ga0495673_0045593 Ga0495673_0045593_789_1367 191
131 3300047472 Ga0495686_0000040 Ga0495686_0000040_245669_246247 191
132 3300047472 Ga0495686_0003620 Ga0495686_0003620_96_674 191
133 3300049523 Ga0501300_000953 Ga0501300_000953_3211_3786 191
134 3300050507 nmdc:mga05p37_110053_c1 nmdc:mga05p37_110053_c1_2365_2940 191
135 3300050508 nmdc:mga09592_20888_c1 nmdc:mga09592_20888_c1_2178_2753 191
136 3300050509 nmdc:mga0qj67_190421_c1 nmdc:mga0qj67_190421_c1_886_1461 191
137 3300053122 Ga0500608_006546 Ga0500608_006546_1100_1678 191
138 3300053125 Ga0500618_000051 Ga0500618_000051_92868_93476 191
139 3300053136 Ga0500559_0386633 Ga0500559_0386633_59_637 191
140 3300053151 Ga0500604_0004524 Ga0500604_0004524_840_1415 191
141 3300053156 Ga0500622_0000007 Ga0500622_0000007_61147_61722 191
142 3300053158 Ga0500627_0070054 Ga0500627_0070054_131_706 191

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07883

Cupin_2

Cupin domain

96

164

0.9

PF02311

AraC_binding

AraC-like ligand binding domain

104

195

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
8hfb-assembly1.cif.gz_B evolved variant of quercetin 2,4-dioxygenase from bacillus subtilis 0.8925 49 157
5fq0-assembly2.cif.gz_D the structure of kdgf from halomonas sp. 0.885 48 144
2oa2-assembly1.cif.gz_A-2 crystal structure of bh2720 (10175341) from bacillus halodurans at 1.41 a resolution 0.873 67 144
5fq0-assembly1.cif.gz_A the structure of kdgf from halomonas sp. 0.8553 48 144
5zbe-assembly1.cif.gz_A crystal structure of aere from microcystis aeruginosa 0.8543 48 144
ID Description Score Start End Superfamily
af_A0A1D6KN98_1_91_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9083 87 144 2.60.120.10
af_Q9USR9_537_626_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8772 54 144 2.60.120.10
af_A0A1D8PPZ7_421_512_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8765 54 144 2.60.120.10
2d40B00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.871 70 144 2.60.120.10
af_P93000_22_217_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8669 70 144 2.60.120.10
ID Description Score Start End GO Terms
AF-A0A1H8VAY8-F1-model_v4 Cupin domain-containing protein 0.9698 36 186
AF-A0A444MTQ9-F1-model_v4 Cupin domain-containing protein 0.9592 35 177
AF-A0A2N9P116-F1-model_v4 Cupin type-2 domain-containing protein 0.9529 58 154
AF-A0A0W8EFH1-F1-model_v4 deleted 0.9493 35 187
AF-A0A6G8CBA6-F1-model_v4 Cupin domain-containing protein 0.9386 35 187

Feature Viewer

pLDDT pTM Quality
90.96 0.79 High
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Predicted Structure (AlphaFold2)

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