F130778

General Info

Members Datasets Scaffolds Average Seq Length
126 54 126 231

Family's Representative Sequence

Representative Sequence 3300027907|Ga0207428_10005125|Ga0207428_1000512513
Length 281
Sequence VKPRNATSAPSTCSKTNGAAERSTSAKWFAYYAGTPANTTKPPPSGFFHDQIWGDKLSLEIFTELTQGTDEWLAARAGIVTASVVGQLITPKTIKPAVNDYSRGLTTLLAAERITGHVEPIHESSDMLRGTLDEPFARDLYSEHFAEATEVGFMVRDDWGFRIGYSPDGLVGDDGLIEIKSRRQKKQLATILADEVPLENMAQIQCGLLVSGREWLDYVSYCGGMPLYVKRVLPDPKWFHAIFQAVEAFEDNAAQMVKNYQTNTAGRPATERINHFEEMRF

Samples

Sample ID Description Type Environment
1 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
2 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
5 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
6 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
7 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
8 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
9 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
10 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
11 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
12 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
13 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
14 3300030735 Rhizosphere soil microbial communities in a healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 4 Metagenome Rhizosphere
15 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
16 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
17 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
18 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
19 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
20 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
21 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
22 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
23 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
24 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
25 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
26 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
27 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
28 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
29 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
30 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
31 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
32 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
33 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
34 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
35 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
36 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
37 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
38 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
39 3300042121 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 Metagenome Rhizosphere
40 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
41 3300042185 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515W_E14_080116_2592 Metagenome Rhizosphere
42 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
43 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
44 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
45 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
46 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
47 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
48 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
49 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
50 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
51 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
52 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
53 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
54 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.79
Rhizosphere 99.21
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MBSR1b_contig_3592667 2162886012 Bacteria 2164
2 MBSR1b_contig_9518358 2162886012 Bacteria 1818
3 Ga0065714_10064529 3300005288 Bacteria 41471
4 Ga0065714_10065238 3300005288 Viruses 11521
5 Ga0065714_10067549 3300005288 Bacteria 5384
6 Ga0065714_10068293 3300005288 Viruses 4835
7 Ga0065714_10070157 3300005288 Viruses 3952
8 Ga0065714_10127260 3300005288 Bacteria 1283
9 Ga0065714_10238441 3300005288 Viruses 800
10 Ga0065715_10106463 3300005293 Viruses 2828
11 Ga0070669_100001023 3300005353 Bacteria 20391
12 Ga0070686_100294336 3300005544 Bacteria 1202
13 Ga0157373_10037055 3300013100 Viruses 3499
14 Ga0157373_10048151 3300013100 Bacteria 3039
15 Ga0157371_10001337 3300013102 Bacteria 25931
16 Ga0157371_10029754 3300013102 Bacteria 3946
17 Ga0157371_10033501 3300013102 Viruses 3690
18 Ga0157371_10044315 3300013102 Viruses 3168
19 Ga0157371_10161700 3300013102 Bacteria 1599
20 Ga0157370_10002441 3300013104 Bacteria 22412
21 Ga0157370_10048465 3300013104 Viruses 4070
22 Ga0157370_10064396 3300013104 Bacteria 3471
23 Ga0157370_10090121 3300013104 Viruses 2880
24 Ga0157370_10102409 3300013104 Viruses 2681
25 Ga0157370_10166804 3300013104 Viruses 2048
26 Ga0157370_10333043 3300013104 Bacteria 1399
27 Ga0157370_10367081 3300013104 Viruses 1326
28 Ga0157370_10407961 3300013104 Viruses 1250
29 Ga0157369_10008600 3300013105 Bacteria 11709
30 Ga0157369_10406779 3300013105 Bacteria 1412
31 Ga0157369_10440203 3300013105 Viruses 1350
32 Ga0157369_10710409 3300013105 Bacteria 1035
33 Ga0157369_10777852 3300013105 Viruses 984
34 Ga0163162_10000402 3300013306 Bacteria 39626
35 Ga0163162_10006728 3300013306 Bacteria 11151
36 Ga0163162_10028203 3300013306 Bacteria 5553
37 Ga0163162_10086913 3300013306 Bacteria 3205
38 Ga0163162_10260750 3300013306 Bacteria 1865
39 Ga0163162_10385752 3300013306 Viruses 1534
40 Ga0163162_10578199 3300013306 Bacteria 1250
41 Ga0163162_10705920 3300013306 Bacteria 1130
42 Ga0157375_10002965 3300013308 Bacteria 14738
43 Ga0157375_10003780 3300013308 Bacteria 13120
44 Ga0157375_10012412 3300013308 Bacteria 7557
45 Ga0157375_10016763 3300013308 Bacteria 6594
46 Ga0157375_10031251 3300013308 Bacteria 5030
47 Ga0157375_10040203 3300013308 Viruses 4506
48 Ga0157375_10401601 3300013308 Bacteria 1537
49 Ga0207681_10001140 3300025923 Bacteria 17145
50 Ga0207428_10005125 3300027907 Bacteria 12282
51 Ga0316178_1059586 3300030735 Bacteria 18952
52 Ga0307408_100010851 3300031548 Bacteria 6011
53 Ga0307408_100062469 3300031548 Viruses 2722
54 Ga0307408_100156099 3300031548 Viruses 1807
55 Ga0307408_100388262 3300031548 Viruses 1195
56 Ga0307405_10030645 3300031731 Viruses 3156
57 Ga0307405_10090225 3300031731 Unclassified 2027
58 Ga0307405_10181346 3300031731 Bacteria 1512
59 Ga0307413_10016897 3300031824 Bacteria 3786
60 Ga0307413_10042851 3300031824 Bacteria 2662
61 Ga0307413_10129965 3300031824 Viruses 1722
62 Ga0307413_10302975 3300031824 Viruses 1213
63 Ga0307413_10647765 3300031824 Viruses 871
64 Ga0307410_10044101 3300031852 Unclassified 2960
65 Ga0307410_10083455 3300031852 Viruses 2250
66 Ga0307410_10140374 3300031852 Viruses 1787
67 Ga0307406_10406211 3300031901 Viruses 1081
68 Ga0307406_10622106 3300031901 Bacteria 893
69 Ga0307407_10019231 3300031903 Bacteria 3473
70 Ga0307412_10002358 3300031911 Bacteria 10470
71 Ga0307412_10002594 3300031911 Bacteria 10034
72 Ga0307412_10041773 3300031911 Viruses 2974
73 Ga0307412_10108062 3300031911 Viruses 1981
74 Ga0307412_10124806 3300031911 Viruses 1860
75 Ga0307412_10132878 3300031911 Bacteria 1810
76 Ga0307412_10194574 3300031911 Viruses 1535
77 Ga0307412_10283845 3300031911 Viruses 1301
78 Ga0307416_100058377 3300032002 Bacteria 3128
79 Ga0307416_100128211 3300032002 Viruses 2277
80 Ga0307416_100489178 3300032002 Viruses 1292
81 Ga0307414_10014500 3300032004 Viruses 4728
82 Ga0307414_10040764 3300032004 Bacteria 3139
83 Ga0307414_10070197 3300032004 Bacteria 2522
84 Ga0307411_10000082 3300032005 Viruses 29336
85 Ga0395899_0001418 3300037312 Bacteria 20549
86 Ga0395900_0000825 3300037418 Bacteria 40983
87 Ga0395900_0000899 3300037418 Bacteria 39106
88 Ga0395900_0075219 3300037418 Bacteria 3472
89 Ga0395898_0001130 3300037466 Bacteria 40951
90 Ga0395898_0062934 3300037466 Viruses 3602
91 Ga0395905_0000809 3300037471 Bacteria 41087
92 Ga0439436_0024710 3300041404 Viruses 1771
93 Ga0439439_0001079 3300041406 Viruses 5193
94 Ga0439439_0005218 3300041406 Unclassified 2959
95 Ga0439439_0006037 3300041406 Viruses 2789
96 Ga0439439_0009504 3300041406 Viruses 2313
97 Ga0439447_017783 3300041407 Viruses 1931
98 Ga0439466_0013169 3300041411 Viruses 3030
99 Ga0439433_0001188 3300041999 Viruses 5350
100 Ga0439442_010982 3300042002 Unclassified 1839
101 Ga0439449_0014230 3300042007 Unclassified 2990
102 Ga0439449_0077996 3300042007 Viruses 1221
103 Ga0439452_017290 3300042010 Viruses 1942
104 Ga0439452_021750 3300042010 Unclassified 1667
105 Ga0439457_034757 3300042014 Viruses 1120
106 Ga0439462_0005077 3300042015 Viruses 3228
107 Ga0439462_0005983 3300042015 Unclassified 3013
108 Ga0439462_0022714 3300042015 Viruses 1642
109 Ga0439462_0026759 3300042015 Viruses 1520
110 Ga0450919_000960 3300042121 Viruses 3732
111 Ga0450907_000658 3300042146 Viruses 9071
112 Ga0450907_010581 3300042146 Viruses 1530
113 Ga0450909_007065 3300042185 Viruses 1621
114 Ga0439434_0050177 3300042435 Viruses 1292
115 Ga0495631_0042267 3300046518 Viruses 2015
116 Ga0495642_0000377 3300046528 Bacteria 24171
117 Ga0495656_0210109 3300046615 Viruses 969
118 Ga0495668_0003026 3300046616 Bacteria 13098
119 Ga0495661_0012307 3300046665 Viruses 5779
120 Ga0495588_0053896 3300046674 Viruses 2074
121 Ga0495670_0037508 3300046691 Bacteria 2416
122 Ga0495581_0002864 3300047315 Bacteria 9853
123 Ga0495636_0000511 3300047318 Bacteria 14269
124 Ga0495675_0061660 3300047444 Viruses 2375
125 Ga0495685_025767 3300047447 Viruses 2024
126 Ga0496102_0076254 3300048905 Bacteria 3084

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037312 Ga0395899_0001418 Ga0395899_0001418_9651_10331 223
2 3300037418 Ga0395900_0000825 Ga0395900_0000825_30085_30765 223
3 3300037418 Ga0395900_0000899 Ga0395900_0000899_4980_5663 223
4 3300037466 Ga0395898_0001130 Ga0395898_0001130_10219_10899 223
5 3300037471 Ga0395905_0000809 Ga0395905_0000809_16057_16737 223
6 3300005544 Ga0070686_100294336 Ga0070686_1002943362 224
7 3300013306 Ga0163162_10260750 Ga0163162_102607503 224
8 3300013306 Ga0163162_10705920 Ga0163162_107059202 224
9 3300005288 Ga0065714_10064529 Ga0065714_1006452949 225
10 3300005288 Ga0065714_10065238 Ga0065714_1006523818 225
11 3300005288 Ga0065714_10067549 Ga0065714_100675495 225
12 3300005288 Ga0065714_10068293 Ga0065714_100682935 225
13 3300005288 Ga0065714_10070157 Ga0065714_100701576 225
14 3300005288 Ga0065714_10127260 Ga0065714_101272601 225
15 3300005288 Ga0065714_10238441 Ga0065714_102384411 225
16 3300005353 Ga0070669_100001023 Ga0070669_10000102312 225
17 3300013100 Ga0157373_10037055 Ga0157373_100370552 225
18 3300013100 Ga0157373_10048151 Ga0157373_100481516 225
19 3300013102 Ga0157371_10001337 Ga0157371_1000133723 225
20 3300013102 Ga0157371_10029754 Ga0157371_100297546 225
21 3300013102 Ga0157371_10033501 Ga0157371_100335012 225
22 3300013102 Ga0157371_10044315 Ga0157371_100443154 225
23 3300013102 Ga0157371_10161700 Ga0157371_101617002 225
24 3300013104 Ga0157370_10002441 Ga0157370_1000244125 225
25 3300013104 Ga0157370_10048465 Ga0157370_100484659 225
26 3300013104 Ga0157370_10064396 Ga0157370_100643962 225
27 3300013104 Ga0157370_10090121 Ga0157370_100901213 225
28 3300013104 Ga0157370_10102409 Ga0157370_101024092 225
29 3300013104 Ga0157370_10166804 Ga0157370_101668044 225
30 3300013104 Ga0157370_10333043 Ga0157370_103330433 225
31 3300013104 Ga0157370_10367081 Ga0157370_103670813 225
32 3300013104 Ga0157370_10407961 Ga0157370_104079612 225
33 3300013105 Ga0157369_10008600 Ga0157369_100086002 225
34 3300013105 Ga0157369_10406779 Ga0157369_104067792 225
35 3300013105 Ga0157369_10440203 Ga0157369_104402032 225
36 3300013105 Ga0157369_10710409 Ga0157369_107104091 225
37 3300013105 Ga0157369_10777852 Ga0157369_107778522 225
38 3300013306 Ga0163162_10000402 Ga0163162_1000040235 225
39 3300013306 Ga0163162_10006728 Ga0163162_1000672811 225
40 3300013306 Ga0163162_10028203 Ga0163162_100282037 225
41 3300013306 Ga0163162_10086913 Ga0163162_100869132 225
42 3300013306 Ga0163162_10385752 Ga0163162_103857521 225
43 3300013306 Ga0163162_10578199 Ga0163162_105781992 225
44 3300013308 Ga0157375_10002965 Ga0157375_1000296521 225
45 3300013308 Ga0157375_10003780 Ga0157375_1000378023 225
46 3300013308 Ga0157375_10012412 Ga0157375_1001241212 225
47 3300013308 Ga0157375_10016763 Ga0157375_1001676313 225
48 3300013308 Ga0157375_10031251 Ga0157375_1003125113 225
49 3300013308 Ga0157375_10040203 Ga0157375_1004020310 225
50 3300013308 Ga0157375_10401601 Ga0157375_104016011 225
51 3300025923 Ga0207681_10001140 Ga0207681_1000114033 225
52 3300027907 Ga0207428_10005125 Ga0207428_1000512513 225
53 3300030735 Ga0316178_1059586 Ga0316178_10595869 225
54 3300031548 Ga0307408_100010851 Ga0307408_10001085112 225
55 3300031548 Ga0307408_100062469 Ga0307408_1000624695 225
56 3300031548 Ga0307408_100156099 Ga0307408_1001560993 225
57 3300031548 Ga0307408_100388262 Ga0307408_1003882622 225
58 3300031731 Ga0307405_10030645 Ga0307405_100306456 225
59 3300031731 Ga0307405_10090225 Ga0307405_100902253 225
60 3300031731 Ga0307405_10181346 Ga0307405_101813462 225
61 3300031824 Ga0307413_10016897 Ga0307413_100168973 225
62 3300031824 Ga0307413_10042851 Ga0307413_100428511 225
63 3300031824 Ga0307413_10129965 Ga0307413_101299651 225
64 3300031824 Ga0307413_10302975 Ga0307413_103029752 225
65 3300031824 Ga0307413_10647765 Ga0307413_106477651 225
66 3300031852 Ga0307410_10044101 Ga0307410_100441013 225
67 3300031852 Ga0307410_10083455 Ga0307410_100834554 225
68 3300031852 Ga0307410_10140374 Ga0307410_101403742 225
69 3300031901 Ga0307406_10406211 Ga0307406_104062112 225
70 3300031901 Ga0307406_10622106 Ga0307406_106221061 225
71 3300031903 Ga0307407_10019231 Ga0307407_100192317 225
72 3300031911 Ga0307412_10002358 Ga0307412_1000235818 225
73 3300031911 Ga0307412_10002594 Ga0307412_1000259421 225
74 3300031911 Ga0307412_10041773 Ga0307412_100417736 225
75 3300031911 Ga0307412_10108062 Ga0307412_101080622 225
76 3300031911 Ga0307412_10124806 Ga0307412_101248063 225
77 3300031911 Ga0307412_10132878 Ga0307412_101328782 225
78 3300031911 Ga0307412_10194574 Ga0307412_101945742 225
79 3300031911 Ga0307412_10283845 Ga0307412_102838452 225
80 3300032002 Ga0307416_100058377 Ga0307416_1000583772 225
81 3300032002 Ga0307416_100128211 Ga0307416_1001282115 225
82 3300032002 Ga0307416_100489178 Ga0307416_1004891782 225
83 3300032004 Ga0307414_10014500 Ga0307414_100145003 225
84 3300032004 Ga0307414_10040764 Ga0307414_100407643 225
85 3300032004 Ga0307414_10070197 Ga0307414_100701975 225
86 3300032005 Ga0307411_10000082 Ga0307411_1000008236 225
87 3300037418 Ga0395900_0075219 Ga0395900_0075219_2522_3199 225
88 3300037466 Ga0395898_0062934 Ga0395898_0062934_1263_1940 225
89 3300041404 Ga0439436_0024710 Ga0439436_0024710_790_1506 225
90 3300041406 Ga0439439_0001079 Ga0439439_0001079_317_1033 225
91 3300041406 Ga0439439_0005218 Ga0439439_0005218_845_1567 225
92 3300041406 Ga0439439_0006037 Ga0439439_0006037_1710_2426 225
93 3300041406 Ga0439439_0009504 Ga0439439_0009504_811_1527 225
94 3300041407 Ga0439447_017783 Ga0439447_017783_139_855 225
95 3300041411 Ga0439466_0013169 Ga0439466_0013169_793_1509 225
96 3300041999 Ga0439433_0001188 Ga0439433_0001188_1847_2563 225
97 3300042002 Ga0439442_010982 Ga0439442_010982_265_987 225
98 3300042007 Ga0439449_0014230 Ga0439449_0014230_1439_2161 225
99 3300042007 Ga0439449_0077996 Ga0439449_0077996_255_971 225
100 3300042010 Ga0439452_017290 Ga0439452_017290_993_1709 225
101 3300042010 Ga0439452_021750 Ga0439452_021750_828_1550 225
102 3300042014 Ga0439457_034757 Ga0439457_034757_104_820 225
103 3300042015 Ga0439462_0005077 Ga0439462_0005077_1920_2636 225
104 3300042015 Ga0439462_0005983 Ga0439462_0005983_853_1575 225
105 3300042015 Ga0439462_0022714 Ga0439462_0022714_915_1631 225
106 3300042015 Ga0439462_0026759 Ga0439462_0026759_793_1509 225
107 3300042121 Ga0450919_000960 Ga0450919_000960_1629_2345 225
108 3300042146 Ga0450907_000658 Ga0450907_000658_2542_3264 225
109 3300042146 Ga0450907_010581 Ga0450907_010581_32_754 225
110 3300042185 Ga0450909_007065 Ga0450909_007065_83_799 225
111 3300042435 Ga0439434_0050177 Ga0439434_0050177_132_848 225
112 3300046518 Ga0495631_0042267 Ga0495631_0042267_803_1480 225
113 3300046528 Ga0495642_0000377 Ga0495642_0000377_20800_21477 225
114 3300046615 Ga0495656_0210109 Ga0495656_0210109_24_701 225
115 3300046616 Ga0495668_0003026 Ga0495668_0003026_11972_12649 225
116 3300046665 Ga0495661_0012307 Ga0495661_0012307_1034_1735 225
117 3300046674 Ga0495588_0053896 Ga0495588_0053896_1330_2016 225
118 3300046691 Ga0495670_0037508 Ga0495670_0037508_583_1260 225
119 3300047315 Ga0495581_0002864 Ga0495581_0002864_5751_6428 225
120 3300047318 Ga0495636_0000511 Ga0495636_0000511_12084_12761 225
121 3300047444 Ga0495675_0061660 Ga0495675_0061660_626_1360 225
122 3300047447 Ga0495685_025767 Ga0495685_025767_785_1462 225
123 3300048905 Ga0496102_0076254 Ga0496102_0076254_2383_3066 225
124 2162886012 MBSR1b_contig_3592667 MBSR1b_0335.00003220 230
125 2162886012 MBSR1b_contig_9518358 MBSR1b_0264.00001390 230
126 3300005293 Ga0065715_10106463 Ga0065715_101064634 230

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09588

YqaJ

YqaJ-like viral recombinase domain

71

214

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
3syy-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.873 13 217
3sz4-assembly1.cif.gz_A crystal structure of lhk-exo in complex with damp 0.8701 13 217
3syy-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.8688 13 217
3sz4-assembly1.cif.gz_A crystal structure of lhk-exo in complex with damp 0.8659 13 217
3slp-assembly1.cif.gz_B crystal structure of lambda exonuclease in complex with a 12 bp symmetric dna duplex 0.8612 8 209
ID Description Score Start End Superfamily
3syyA00 Alpha Beta;Alpha-Beta Complex;Lambda Exonuclease; Chain A; 0.873 13 217 3.90.320.10
3syyA00 Alpha Beta;Alpha-Beta Complex;Lambda Exonuclease; Chain A; 0.8688 13 217 3.90.320.10
1avqA00 Alpha Beta;Alpha-Beta Complex;Lambda Exonuclease; Chain A; 0.8034 9 209 3.90.320.10
af_Q8GW93_101_301_3.90.320.10 Alpha Beta;Alpha-Beta Complex;Lambda Exonuclease; Chain A; 0.7966 5 202 3.90.320.10
af_Q8SXR5_246_442_3.90.320.10 Alpha Beta;Alpha-Beta Complex;Lambda Exonuclease; Chain A; 0.7824 11 203 3.90.320.10
ID Description Score Start End GO Terms
AF-A0A1H5M4P5-F1-model_v4 YqaJ-like recombinase domain-containing protein 0.9858 2 227
AF-A0A846YTC4-F1-model_v4 YqaJ viral recombinase family protein 0.9849 3 226
AF-A0A4V3IVS8-F1-model_v4 YqaJ viral recombinase domain-containing protein 0.9789 1 230
AF-A0A4R8WP22-F1-model_v4 YqaJ viral recombinase domain-containing protein 0.9772 1 230
AF-A0A4V3IVS8-F1-model_v4 YqaJ viral recombinase domain-containing protein 0.9747 1 230

Feature Viewer

pLDDT pTM Quality
91.46 0.88 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map