F123808

General Info

Members Datasets Scaffolds Average Seq Length
124 97 123 264

Family's Representative Sequence

Representative Sequence 3300046543|Ga0495645_0000043|Ga0495645_0000043_1534_2439
Length 301
Sequence VRNRLGAAARIRPDREPRERGRRQGRRYLHGIASEPTPNLPERAEILGIPLAVSDYERVMDWMDAMVAADARGYVTAAAVNLVMSAREQPETLAAVLGATLTVPDGMPLVWALHALGHARATRVYGPELMAKYCARAARAGTPIYLYGGRHDDGARELLARRLRERFPGLEIAGSSSPPFRELTPEEDEREIELINASGAAVVWVGTGQPKQERWMHEMRPRLTPPLLVGVGAAFDFHAGLVKQAPPWMGRSGLEWAYRLYREPRRLWRRYARYNPRFVLAFARQYWQHRRGSDRRRRSAR

Samples

Sample ID Description Type Environment
1 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
12 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
13 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
14 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
15 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
16 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
17 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
18 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
19 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
21 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
22 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
23 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
24 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
25 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
26 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
27 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
44 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
45 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
46 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
47 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
48 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
49 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
50 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
51 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
52 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
53 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
54 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
55 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
56 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
57 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
58 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
59 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
60 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
61 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
62 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
63 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
64 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
65 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
66 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
67 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
68 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
69 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
70 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
71 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
72 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
73 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
74 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
75 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
76 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
77 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
78 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
79 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
80 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
81 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
82 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
83 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
84 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
85 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
86 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
87 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
88 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
89 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
90 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
91 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
92 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
93 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
94 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
95 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
96 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
97 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.19
Metatranscriptomes 0
Isolates 0.81

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.81
Nodule 0
Rhizoplane 23.39
Rhizosphere 74.19
Stem 0
Stem Tuber 0
Unclassified 1.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10011603 3300001989 Bacteria 3251
2 JGI24737J22298_10006630 3300001990 Bacteria 3943
3 Ga0070683_100238885 3300005329 Bacteria 1728
4 Ga0070683_100300576 3300005329 Bacteria 1527
5 Ga0070683_100727604 3300005329 Bacteria 950
6 Ga0070667_100173606 3300005367 Bacteria 1904
7 Ga0070713_100025454 3300005436 Bacteria 4627
8 Ga0070711_100000653 3300005439 Bacteria 18090
9 Ga0070681_10021263 3300005458 Bacteria 6503
10 Ga0070707_100297898 3300005468 Bacteria 1567
11 Ga0070679_100205911 3300005530 Bacteria 1932
12 Ga0068857_100021963 3300005577 Bacteria 5616
13 Ga0068857_100249244 3300005577 Bacteria 1628
14 Ga0068864_100147738 3300005618 Bacteria 2126
15 Ga0068864_100177251 3300005618 Bacteria 1947
16 Ga0068870_10071310 3300005840 Bacteria 1895
17 Ga0068858_100208157 3300005842 Bacteria 1851
18 Ga0070712_100149289 3300006175 Unclassified 1793
19 Ga0075430_100000494 3300006846 Bacteria 29636
20 Ga0075435_100377836 3300007076 Unclassified 1217
21 Ga0105240_10019388 3300009093 Bacteria 9088
22 Ga0111539_10282783 3300009094 Bacteria 1930
23 Ga0105245_10268376 3300009098 Bacteria 1663
24 Ga0105243_10405597 3300009148 Bacteria 1267
25 Ga0105237_10002000 3300009545 Bacteria 25943
26 Ga0105246_10138841 3300011119 Bacteria 1825
27 Ga0157369_10674246 3300013105 Bacteria 1065
28 Ga0163163_10654881 3300014325 Bacteria 1114
29 Ga0207426_1004002 3300025302 Bacteria 7479
30 Ga0207647_10069505 3300025904 Bacteria 2129
31 Ga0207699_10032941 3300025906 Bacteria 2924
32 Ga0207643_10295647 3300025908 Bacteria 1007
33 Ga0207695_10009757 3300025913 Bacteria 11813
34 Ga0207671_10019327 3300025914 Bacteria 5210
35 Ga0207693_10346445 3300025915 Bacteria 1163
36 Ga0207663_10000496 3300025916 Bacteria 17189
37 Ga0207650_10395907 3300025925 Bacteria 1143
38 Ga0207700_10335315 3300025928 Bacteria 1314
39 Ga0207709_10182740 3300025935 Bacteria 1482
40 Ga0207661_10210367 3300025944 Bacteria 1714
41 Ga0207677_10029891 3300026023 Bacteria 3470
42 Ga0207703_10247740 3300026035 Bacteria 1604
43 Ga0207703_10732831 3300026035 Bacteria 941
44 Ga0207676_10069629 3300026095 Bacteria 2818
45 Ga0207676_10195853 3300026095 Bacteria 1782
46 Ga0207674_10280262 3300026116 Bacteria 1615
47 Ga0207683_10048514 3300026121 Bacteria 3718
48 Ga0265337_1035195 3300028556 Bacteria 1468
49 Ga0265326_10000523 3300028558 Bacteria 14669
50 Ga0265319_1000006 3300028563 Bacteria 228868
51 Ga0265319_1000094 3300028563 Bacteria 68209
52 Ga0265319_1005966 3300028563 Bacteria 5727
53 Ga0265318_10001659 3300028577 Bacteria 12794
54 Ga0265336_10000019 3300028666 Bacteria 218636
55 Ga0307515_10237807 3300028794 Bacteria 1599
56 Ga0265338_10000413 3300028800 Bacteria 76430
57 Ga0265338_10034781 3300028800 Bacteria 4859
58 Ga0265324_10008788 3300029957 Bacteria 3984
59 Ga0316181_1264649 3300030744 Bacteria 1626
60 Ga0265320_10015382 3300031240 Bacteria 4327
61 Ga0265320_10024927 3300031240 Bacteria 3152
62 Ga0265340_10000004 3300031247 Bacteria 218649
63 Ga0265339_10081616 3300031249 Bacteria 1708
64 Ga0265316_10014723 3300031344 Bacteria 6867
65 Ga0307513_10251613 3300031456 Bacteria 1563
66 Ga0265313_10060612 3300031595 Bacteria 1774
67 Ga0316579_10128978 3300031691 Bacteria 1218
68 Ga0265342_10109087 3300031712 Bacteria 1568
69 Ga0373935_0281037 3300035692 Bacteria 1172
70 Ga0436362_0284590 3300039453 Unclassified 1241
71 Ga0466966_0200625 3300044684 Bacteria 1207
72 Ga0466963_0141150 3300044694 Bacteria 1669
73 Ga0466970_0243214 3300044765 Bacteria 1007
74 Ga0466959_0220738 3300045049 Bacteria 1315
75 Ga0466959_0327146 3300045049 Bacteria 1047
76 Ga0466967_0169007 3300045976 Bacteria 2056
77 Ga0495653_0000576 3300046463 Bacteria 28174
78 Ga0495630_0000974 3300046517 Bacteria 19954
79 Ga0495645_0000043 3300046543 Bacteria 91036
80 Ga0495645_0005272 3300046543 Bacteria 8854
81 Ga0495625_0034424 3300046660 Bacteria 3739
82 Ga0495657_0000021 3300046675 Bacteria 153590
83 Ga0495646_0053725 3300046680 Bacteria 2427
84 Ga0495670_0063119 3300046691 Bacteria 1865
85 Ga0495604_0000813 3300047317 Bacteria 26163
86 Ga0495676_0098148 3300047321 Bacteria 2174
87 Ga0495684_0005494 3300047471 Bacteria 9866
88 Ga0496100_0003588 3300048903 Bacteria 8106
89 Ga0496100_0050419 3300048903 Bacteria 2697
90 Ga0496101_0004010 3300048904 Bacteria 9206
91 Ga0496102_0114139 3300048905 Bacteria 2520
92 Ga0496102_0356130 3300048905 Bacteria 1378
93 Ga0496104_0000001 3300048907 Bacteria 711867
94 Ga0496104_0068313 3300048907 Bacteria 3377
95 Ga0496104_0099029 3300048907 Bacteria 2791
96 Ga0496104_0482460 3300048907 Bacteria 1151
97 Ga0496105_0129251 3300048908 Bacteria 2083
98 Ga0496106_0691047 3300048909 Bacteria 813
99 Ga0496107_0047682 3300048910 Bacteria 3085
100 Ga0496108_0003621 3300048911 Bacteria 12377
101 Ga0496108_0053908 3300048911 Bacteria 3374
102 Ga0496108_0248303 3300048911 Bacteria 1548
103 Ga0496109_0005969 3300048912 Bacteria 10227
104 Ga0496109_0017723 3300048912 Bacteria 6247
105 Ga0496109_0019975 3300048912 Bacteria 5914
106 Ga0496109_0044531 3300048912 Bacteria 4026
107 Ga0496110_0000034 3300048913 Bacteria 65177
108 Ga0496110_0192048 3300048913 Bacteria 1854
109 Ga0496110_0361100 3300048913 Bacteria 1323
110 Ga0496111_0000468 3300048914 Bacteria 20561
111 Ga0496112_0000800 3300048915 Bacteria 22208
112 Ga0496112_0062070 3300048915 Bacteria 3685
113 Ga0496113_0010005 3300048916 Bacteria 6253
114 Ga0496113_0015111 3300048916 Bacteria 5292
115 Ga0496114_0105886 3300048917 Bacteria 2406
116 Ga0496115_0058458 3300048918 Bacteria 3103
117 Ga0501069_0035181 3300049585 Bacteria 2759
118 Ga0501044_0281114 3300049823 Bacteria 1598
119 nmdc:mga0qj67_477_c1 3300050509 Bacteria 27359
120 nmdc:mga0rr50_277673_c1 3300050513 Unclassified 1397
121 nmdc:mga0rr50_811899_c1 3300050513 Unclassified 798
122 Ga0495601_0046794 3300053077 Bacteria 2723
123 Ga0495612_0000326 3300053078 Bacteria 19328

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025913 Ga0207695_10009757 Ga0207695_100097577 223
2 3300009093 Ga0105240_10019388 Ga0105240_100193887 226
3 3300046517 Ga0495630_0000974 Ga0495630_0000974_17543_18271 229
4 3300046675 Ga0495657_0000021 Ga0495657_0000021_1671_2399 229
5 3300028556 Ga0265337_1035195 Ga0265337_10351952 236
6 3300028558 Ga0265326_10000523 Ga0265326_100005232 236
7 3300028563 Ga0265319_1000094 Ga0265319_10000943 236
8 3300028666 Ga0265336_10000019 Ga0265336_10000019139 236
9 3300028800 Ga0265338_10000413 Ga0265338_1000041310 236
10 3300029957 Ga0265324_10008788 Ga0265324_100087882 236
11 3300031247 Ga0265340_10000004 Ga0265340_10000004139 236
12 3300031249 Ga0265339_10081616 Ga0265339_100816161 236
13 3300031344 Ga0265316_10014723 Ga0265316_100147233 236
14 3300031712 Ga0265342_10109087 Ga0265342_101090872 236
15 3300053078 Ga0495612_0000326 Ga0495612_0000326_15331_16065 236
16 3300005439 Ga0070711_100000653 Ga0070711_10000065316 243
17 3300005468 Ga0070707_100297898 Ga0070707_1002978982 243
18 3300006175 Ga0070712_100149289 Ga0070712_1001492892 243
19 3300025915 Ga0207693_10346445 Ga0207693_103464452 243
20 3300025916 Ga0207663_10000496 Ga0207663_1000049614 243
21 3300044684 Ga0466966_0200625 Ga0466966_0200625_120_884 243
22 3300046680 Ga0495646_0053725 Ga0495646_0053725_1393_2157 243
23 3300047317 Ga0495604_0000813 Ga0495604_0000813_2990_3754 243
24 3300047321 Ga0495676_0098148 Ga0495676_0098148_1119_1880 243
25 3300049823 Ga0501044_0281114 Ga0501044_0281114_609_1379 243
26 3300050513 nmdc:mga0rr50_811899_c1 nmdc:mga0rr50_811899_c1_15_770 243
27 3300048908 Ga0496105_0129251 Ga0496105_0129251_290_1069 244
28 3300045976 Ga0466967_0169007 Ga0466967_0169007_426_1172 245
29 3300046463 Ga0495653_0000576 Ga0495653_0000576_26349_27266 245
30 3300048907 Ga0496104_0000001 Ga0496104_0000001_19096_19869 245
31 3300048913 Ga0496110_0000034 Ga0496110_0000034_36136_36909 245
32 3300048914 Ga0496111_0000468 Ga0496111_0000468_18749_19522 245
33 3300011119 Ga0105246_10138841 Ga0105246_101388412 247
34 3300047471 Ga0495684_0005494 Ga0495684_0005494_1617_2483 247
35 3300048909 Ga0496106_0691047 Ga0496106_0691047_14_769 247
36 3300048911 Ga0496108_0248303 Ga0496108_0248303_43_798 247
37 3300046691 Ga0495670_0063119 Ga0495670_0063119_875_1621 248
38 3300007076 Ga0075435_100377836 Ga0075435_1003778362 249
39 3300050513 nmdc:mga0rr50_277673_c1 nmdc:mga0rr50_277673_c1_239_1033 249
40 3300045049 Ga0466959_0327146 Ga0466959_0327146_157_933 250
41 3300048903 Ga0496100_0003588 Ga0496100_0003588_2301_3092 250
42 3300048904 Ga0496101_0004010 Ga0496101_0004010_2257_3048 250
43 3300048907 Ga0496104_0099029 Ga0496104_0099029_1460_2233 250
44 3300048911 Ga0496108_0053908 Ga0496108_0053908_2297_3070 250
45 3300048912 Ga0496109_0005969 Ga0496109_0005969_6317_7090 250
46 3300048912 Ga0496109_0017723 Ga0496109_0017723_3331_4113 250
47 3300048915 Ga0496112_0000800 Ga0496112_0000800_11010_11783 250
48 3300048916 Ga0496113_0010005 Ga0496113_0010005_4884_5657 250
49 3300025935 Ga0207709_10182740 Ga0207709_101827402 251
50 3300025906 Ga0207699_10032941 Ga0207699_100329413 252
51 3300028794 Ga0307515_10237807 Ga0307515_102378072 252
52 3300031691 Ga0316579_10128978 Ga0316579_101289781 252
53 3300048905 Ga0496102_0356130 Ga0496102_0356130_410_1177 252
54 3300005436 Ga0070713_100025454 Ga0070713_1000254543 254
55 3300006846 Ga0075430_100000494 Ga0075430_1000004949 254
56 3300048913 Ga0496110_0361100 Ga0496110_0361100_92_877 254
57 3300050509 nmdc:mga0qj67_477_c1 nmdc:mga0qj67_477_c1_4183_5004 254
58 3300005530 Ga0070679_100205911 Ga0070679_1002059111 255
59 3300005577 Ga0068857_100249244 Ga0068857_1002492442 255
60 3300025302 Ga0207426_1004002 Ga0207426_10040024 255
61 3300031456 Ga0307513_10251613 Ga0307513_102516132 255
62 3300025928 Ga0207700_10335315 Ga0207700_103353151 256
63 3300044765 Ga0466970_0243214 Ga0466970_0243214_170_994 256
64 3300005329 Ga0070683_100238885 Ga0070683_1002388852 257
65 3300005329 Ga0070683_100727604 Ga0070683_1007276041 257
66 3300005618 Ga0068864_100147738 Ga0068864_1001477382 257
67 3300005618 Ga0068864_100177251 Ga0068864_1001772512 257
68 3300005840 Ga0068870_10071310 Ga0068870_100713102 257
69 3300009094 Ga0111539_10282783 Ga0111539_102827831 257
70 3300014325 Ga0163163_10654881 Ga0163163_106548812 257
71 3300025908 Ga0207643_10295647 Ga0207643_102956471 257
72 3300025925 Ga0207650_10395907 Ga0207650_103959071 257
73 3300025944 Ga0207661_10210367 Ga0207661_102103673 257
74 3300026023 Ga0207677_10029891 Ga0207677_100298913 257
75 3300026035 Ga0207703_10732831 Ga0207703_107328311 257
76 3300026095 Ga0207676_10069629 Ga0207676_100696292 257
77 3300026095 Ga0207676_10195853 Ga0207676_101958532 257
78 3300026116 Ga0207674_10280262 Ga0207674_102802622 257
79 3300026121 Ga0207683_10048514 Ga0207683_100485144 257
80 3300035692 Ga0373935_0281037 Ga0373935_0281037_108_1010 257
81 3300046543 Ga0495645_0005272 Ga0495645_0005272_6892_7677 257
82 3300048903 Ga0496100_0050419 Ga0496100_0050419_1183_2001 257
83 3300048905 Ga0496102_0114139 Ga0496102_0114139_921_1739 257
84 3300048907 Ga0496104_0068313 Ga0496104_0068313_2015_2833 257
85 3300048907 Ga0496104_0482460 Ga0496104_0482460_79_897 257
86 3300048910 Ga0496107_0047682 Ga0496107_0047682_535_1353 257
87 3300048911 Ga0496108_0003621 Ga0496108_0003621_8652_9470 257
88 3300048912 Ga0496109_0019975 Ga0496109_0019975_3176_3994 257
89 3300048912 Ga0496109_0044531 Ga0496109_0044531_459_1277 257
90 3300048913 Ga0496110_0192048 Ga0496110_0192048_519_1337 257
91 3300048915 Ga0496112_0062070 Ga0496112_0062070_1668_2486 257
92 3300048916 Ga0496113_0015111 Ga0496113_0015111_3268_4086 257
93 3300048917 Ga0496114_0105886 Ga0496114_0105886_907_1725 257
94 3300048918 Ga0496115_0058458 Ga0496115_0058458_1485_2303 257
95 3300049585 Ga0501069_0035181 Ga0501069_0035181_1473_2297 257
96 3300045049 Ga0466959_0220738 Ga0466959_0220738_378_1253 258
97 3300046543 Ga0495645_0000043 Ga0495645_0000043_1534_2439 258
98 3300053077 Ga0495601_0046794 Ga0495601_0046794_1155_2042 258
99 3300001989 JGI24739J22299_10011603 JGI24739J22299_100116033 259
100 3300001990 JGI24737J22298_10006630 JGI24737J22298_100066304 259
101 3300005329 Ga0070683_100300576 Ga0070683_1003005762 259
102 3300005367 Ga0070667_100173606 Ga0070667_1001736062 259
103 3300005458 Ga0070681_10021263 Ga0070681_100212631 259
104 3300005577 Ga0068857_100021963 Ga0068857_1000219632 259
105 3300005842 Ga0068858_100208157 Ga0068858_1002081572 259
106 3300009098 Ga0105245_10268376 Ga0105245_102683762 259
107 3300009148 Ga0105243_10405597 Ga0105243_104055972 259
108 3300009545 Ga0105237_10002000 Ga0105237_1000200020 259
109 3300013105 Ga0157369_10674246 Ga0157369_106742462 259
110 3300025904 Ga0207647_10069505 Ga0207647_100695052 259
111 3300025914 Ga0207671_10019327 Ga0207671_100193272 259
112 3300026035 Ga0207703_10247740 Ga0207703_102477402 259
113 3300028563 Ga0265319_1000006 Ga0265319_100000622 259
114 3300028563 Ga0265319_1005966 Ga0265319_10059663 259
115 3300028577 Ga0265318_10001659 Ga0265318_100016595 259
116 3300028800 Ga0265338_10034781 Ga0265338_100347811 259
117 3300030744 Ga0316181_1264649 Ga0316181_12646492 259
118 3300031240 Ga0265320_10015382 Ga0265320_100153825 259
119 3300031240 Ga0265320_10024927 Ga0265320_100249272 259
120 3300031595 Ga0265313_10060612 Ga0265313_100606122 259
121 3300039453 Ga0436362_0284590 Ga0436362_0284590_171_1001 259
122 3300044694 Ga0466963_0141150 Ga0466963_0141150_604_1491 259
123 3300046660 Ga0495625_0034424 Ga0495625_0034424_724_1521 259
124 iso_pu_bacteria 2816332119 2816425057 259

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03808

Glyco_tran_WecG

Glycosyl transferase WecG/TagA/CpsF family

99

271

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
5wfg-assembly1.cif.gz_B crystal structure of the tara wall teichoic acid glycosyltransferase bound to udp 0.9542 14 205
5wfg-assembly2.cif.gz_E crystal structure of the tara wall teichoic acid glycosyltransferase bound to udp 0.9539 14 209
5wfg-assembly1.cif.gz_C crystal structure of the tara wall teichoic acid glycosyltransferase bound to udp 0.9525 16 209
5wb4-assembly1.cif.gz_E crystal structure of the tara wall teichoic acid glycosyltransferase 0.9484 14 205
5wfg-assembly2.cif.gz_F crystal structure of the tara wall teichoic acid glycosyltransferase bound to udp 0.9464 16 209
ID Description Score Start End Superfamily
af_P27836_65_232_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9126 72 238 3.40.50.2300
af_P27836_65_232_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8871 72 238 3.40.50.2300
af_Q2G2L3_69_233_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8593 73 239 3.40.50.2300
af_Q2G2L3_69_233_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.821 73 239 3.40.50.2300
af_Q9C5V5_155_311_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.6954 104 198 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A1V2P2Q5-F1-model_v4 Glycosyltransferase 0.9891 28 259 GO:0009058
GO:0016758
AF-A0A4V1KIJ9-F1-model_v4 Glycosyltransferase 0.9844 14 253 GO:0009058
GO:0016758
AF-A0A2N2K4Q4-F1-model_v4 Glycosyltransferase 0.982 28 253 GO:0009058
GO:0016758
AF-A0A2E0R4Z1-F1-model_v4 Glycosyltransferase 0.9817 14 253 GO:0009058
GO:0016020
GO:0016758
AF-A0A1X0SVE1-F1-model_v4 WecB/TagA/CpsF family glycosyl transferase 0.9788 14 251 GO:0009058
GO:0016020
GO:0016758

Feature Viewer

pLDDT pTM Quality
91 0.88 High
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Predicted Structure (AlphaFold2)

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