F037609
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 106 | 89 | 99 | 249 |
Family's Representative Sequence
| Representative Sequence | 3300009147|Ga0114129_10019061|Ga0114129_1001906111 |
| Length | 278 |
| Sequence | LAAIDGFVESSSPHPASRAAMARLVLRGRIRVISLLYDSIGKRYTSVRREDPRIGARIRAALGDARSVVNVGAGTGAYEPADLAVTAVEPSEVMIAQRPEGAAPVVRAFAEELPFEDASFDAAMVVLSDHHWRDHERGLSELRRVARRVVLFTWEPASALETWVVRDYFPCFVELIPDGYRLAMTIERLGGGREEVVPIPHDCLDGFFHAYWRRPEAYLDPEVRAGISAFALMDQRCVREGLARLERDLASGEWARRNAELLELDELDGGYRLVVHEH |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2617270889 | Nostoc punctiforme PCC 73102 | Isolate | Unclassified |
| 2 | 2831426010 | Nostoc sp. 106C | Isolate | Unclassified |
| 3 | 2848694841 | Nostoc sp. RF31YmG | Isolate | Unclassified |
| 4 | 2849660919 | Nostoc sp. T09 | Isolate | Unclassified |
| 5 | 2866612099 | Amycolatopsis suaedae 8-3EHSu | Isolate | Unclassified |
| 6 | 2886627955 | Nostoc sp. PA-18-2419 JC1668 | Isolate | Unclassified |
| 7 | 3300003373 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 8 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 10 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 11 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 12 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 13 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 14 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 16 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 17 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 18 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 19 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 20 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 21 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 22 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 23 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 24 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 25 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 26 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 27 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 31 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Metagenome | Rhizosphere |
| 40 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 41 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 42 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 43 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 44 | 3300035111 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 45 | 3300035120 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 | Metagenome | Rhizosphere |
| 46 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 47 | 3300038705 | Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 | Metagenome | Unclassified |
| 48 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 49 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 50 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 51 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 52 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 53 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 54 | 3300046500 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere | Metagenome | Rhizosphere |
| 55 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 56 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 57 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 58 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 59 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 60 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 61 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 62 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 63 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 64 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 65 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 66 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 67 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 68 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 69 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 70 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 71 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 72 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 73 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 74 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 75 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 76 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 77 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 78 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 79 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 80 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 81 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 82 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 83 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 84 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 85 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 86 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 87 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 88 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 89 | 642555144 | Nostoc punctiforme PCC 73102 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 93.4 |
| Metatranscriptomes | 0 |
| Isolates | 6.6 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 13.21 |
| Rhizosphere | 75.47 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 11.32 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25407J50210_10014901 | 3300003373 | Unclassified | 2007 |
| 2 | Ga0070658_10047412 | 3300005327 | Bacteria | 3478 |
| 3 | Ga0070680_100097900 | 3300005336 | Bacteria | 2432 |
| 4 | Ga0070681_10108136 | 3300005458 | Bacteria | 2721 |
| 5 | Ga0070679_100014992 | 3300005530 | Bacteria | 7448 |
| 6 | Ga0070684_100365562 | 3300005535 | Bacteria | 1328 |
| 7 | Ga0070684_100513131 | 3300005535 | Bacteria | 1111 |
| 8 | Ga0068853_100151293 | 3300005539 | Bacteria | 2089 |
| 9 | Ga0068853_100551317 | 3300005539 | Bacteria | 1092 |
| 10 | Ga0070665_100000106 | 3300005548 | Bacteria | 157315 |
| 11 | Ga0068854_100011765 | 3300005578 | Bacteria | 5712 |
| 12 | Ga0068861_100475384 | 3300005719 | Bacteria | 1125 |
| 13 | Ga0068863_100000021 | 3300005841 | Bacteria | 198088 |
| 14 | Ga0068860_100295875 | 3300005843 | Bacteria | 1585 |
| 15 | Ga0081538_10001246 | 3300005981 | Bacteria | 26599 |
| 16 | Ga0075428_100009817 | 3300006844 | Bacteria | 10642 |
| 17 | Ga0075431_100125235 | 3300006847 | Bacteria | 2651 |
| 18 | Ga0075431_100291162 | 3300006847 | Bacteria | 1652 |
| 19 | Ga0075434_100196706 | 3300006871 | Bacteria | 2036 |
| 20 | Ga0075434_100477562 | 3300006871 | Bacteria | 1268 |
| 21 | Ga0075429_100132008 | 3300006880 | Bacteria | 2185 |
| 22 | Ga0105240_10411344 | 3300009093 | Bacteria | 1521 |
| 23 | Ga0105245_10000016 | 3300009098 | Bacteria | 204372 |
| 24 | Ga0114129_10019061 | 3300009147 | Bacteria | 9773 |
| 25 | Ga0114129_10568132 | 3300009147 | Bacteria | 1473 |
| 26 | Ga0114129_10633729 | 3300009147 | Bacteria | 1381 |
| 27 | Ga0105242_10000078 | 3300009176 | Bacteria | 66874 |
| 28 | Ga0105249_10000616 | 3300009553 | Bacteria | 32470 |
| 29 | Ga0105239_10113302 | 3300010375 | Unclassified | 3007 |
| 30 | Ga0157369_10463484 | 3300013105 | Bacteria | 1312 |
| 31 | Ga0207707_10013007 | 3300025912 | Bacteria | 7245 |
| 32 | Ga0207652_10012710 | 3300025921 | Bacteria | 6808 |
| 33 | Ga0207687_10000018 | 3300025927 | Bacteria | 236159 |
| 34 | Ga0207686_10000105 | 3300025934 | Bacteria | 68972 |
| 35 | Ga0207661_10057820 | 3300025944 | Bacteria | 3120 |
| 36 | Ga0207712_10000007 | 3300025961 | Bacteria | 539589 |
| 37 | Ga0207639_10125136 | 3300026041 | Bacteria | 2119 |
| 38 | Ga0207639_10495877 | 3300026041 | Bacteria | 1115 |
| 39 | Ga0207676_10392444 | 3300026095 | Bacteria | 1295 |
| 40 | Ga0265319_1000693 | 3300028563 | Bacteria | 21962 |
| 41 | Ga0265338_10003560 | 3300028800 | Bacteria | 21774 |
| 42 | Ga0265325_10005767 | 3300031241 | Bacteria | 7595 |
| 43 | Ga0265316_10143286 | 3300031344 | Bacteria | 1794 |
| 44 | Ga0265316_10344856 | 3300031344 | Bacteria | 1079 |
| 45 | Ga0307507_10114971 | 3300033179 | Bacteria | 2180 |
| 46 | Ga0373923_0048305 | 3300035111 | Bacteria | 1776 |
| 47 | Ga0373957_0253526 | 3300035120 | Unclassified | 741 |
| 48 | Ga0395901_0526242 | 3300038443 | Bacteria | 1201 |
| 49 | Ga0237819_03814 | 3300038705 | Bacteria | 2592 |
| 50 | Ga0451853_1628146 | 3300041512 | Bacteria | 3816 |
| 51 | Ga0466963_0076486 | 3300044694 | Bacteria | 2260 |
| 52 | Ga0466964_0061014 | 3300044706 | Bacteria | 1569 |
| 53 | Ga0466967_0242806 | 3300045976 | Bacteria | 1718 |
| 54 | Ga0495592_0000657 | 3300046454 | Bacteria | 24027 |
| 55 | Ga0495580_0233710 | 3300046472 | Unclassified | 1262 |
| 56 | Ga0495596_0031230 | 3300046500 | Bacteria | 2129 |
| 57 | Ga0495608_0015106 | 3300046511 | Bacteria | 5357 |
| 58 | Ga0495628_0002849 | 3300046516 | Bacteria | 15497 |
| 59 | Ga0495628_0034103 | 3300046516 | Unclassified | 4097 |
| 60 | Ga0495630_0001096 | 3300046517 | Bacteria | 18614 |
| 61 | Ga0495630_0176161 | 3300046517 | Bacteria | 1630 |
| 62 | Ga0495640_0004808 | 3300046533 | Bacteria | 10755 |
| 63 | Ga0495645_0046254 | 3300046543 | Bacteria | 3172 |
| 64 | Ga0495635_0000016 | 3300046663 | Bacteria | 214088 |
| 65 | Ga0495657_0012251 | 3300046675 | Bacteria | 6372 |
| 66 | Ga0495669_0000211 | 3300046684 | Bacteria | 35387 |
| 67 | Ga0495669_0149797 | 3300046684 | Bacteria | 1104 |
| 68 | Ga0495613_0000803 | 3300046689 | Bacteria | 24344 |
| 69 | Ga0495624_0000008 | 3300046690 | Bacteria | 145035 |
| 70 | Ga0495649_0005093 | 3300046694 | Bacteria | 8439 |
| 71 | Ga0495600_0261281 | 3300046809 | Unclassified | 1100 |
| 72 | Ga0495600_0273781 | 3300046809 | Bacteria | 1070 |
| 73 | Ga0495674_0228330 | 3300047319 | Bacteria | 1537 |
| 74 | Ga0495672_0036472 | 3300047320 | Bacteria | 3019 |
| 75 | Ga0495676_0018293 | 3300047321 | Bacteria | 6178 |
| 76 | Ga0495680_0000773 | 3300047322 | Bacteria | 35829 |
| 77 | Ga0495680_0011368 | 3300047322 | Bacteria | 7881 |
| 78 | Ga0496100_0000002 | 3300048903 | Bacteria | 489057 |
| 79 | Ga0496101_0000001 | 3300048904 | Bacteria | 489057 |
| 80 | Ga0496102_0000132 | 3300048905 | Bacteria | 103176 |
| 81 | Ga0496103_0000077 | 3300048906 | Bacteria | 112223 |
| 82 | Ga0496104_0000009 | 3300048907 | Bacteria | 488055 |
| 83 | Ga0496105_0000007 | 3300048908 | Bacteria | 339658 |
| 84 | Ga0496106_0000061 | 3300048909 | Bacteria | 86524 |
| 85 | Ga0496107_0000013 | 3300048910 | Bacteria | 178284 |
| 86 | Ga0496108_0000001 | 3300048911 | Bacteria | 919044 |
| 87 | Ga0496109_0000003 | 3300048912 | Bacteria | 420862 |
| 88 | Ga0496109_0003806 | 3300048912 | Bacteria | 12595 |
| 89 | Ga0496109_0160099 | 3300048912 | Bacteria | 2109 |
| 90 | Ga0496109_0315978 | 3300048912 | Bacteria | 1474 |
| 91 | Ga0496113_0236104 | 3300048916 | Bacteria | 1459 |
| 92 | Ga0496117_0271884 | 3300048920 | Bacteria | 912 |
| 93 | Ga0496125_0098813 | 3300048928 | Bacteria | 2159 |
| 94 | nmdc:mga05p37_7464_c2 | 3300050507 | Bacteria | 10464 |
| 95 | nmdc:mga0qj67_184950_c1 | 3300050509 | Bacteria | 1692 |
| 96 | nmdc:mga06r32_115180_c1 | 3300050510 | Bacteria | 2647 |
| 97 | nmdc:mga06r32_375681_c1 | 3300050510 | Bacteria | 1404 |
| 98 | nmdc:mga08y16_300265_c1 | 3300050511 | Bacteria | 1655 |
| 99 | Ga0495601_0000124 | 3300053077 | Bacteria | 43205 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300013105 | Ga0157369_10463484 | Ga0157369_104634842 | 220 |
| 2 | 3300038443 | Ga0395901_0526242 | Ga0395901_0526242_416_1186 | 220 |
| 3 | 3300035120 | Ga0373957_0253526 | Ga0373957_0253526_22_714 | 226 |
| 4 | 3300048912 | Ga0496109_0003806 | Ga0496109_0003806_3320_4063 | 229 |
| 5 | 3300006844 | Ga0075428_100009817 | Ga0075428_1000098175 | 231 |
| 6 | 3300006847 | Ga0075431_100125235 | Ga0075431_1001252352 | 231 |
| 7 | 3300006871 | Ga0075434_100477562 | Ga0075434_1004775621 | 231 |
| 8 | 3300006880 | Ga0075429_100132008 | Ga0075429_1001320081 | 231 |
| 9 | 3300050507 | nmdc:mga05p37_7464_c2 | nmdc:mga05p37_7464_c2_6233_6931 | 231 |
| 10 | 3300050509 | nmdc:mga0qj67_184950_c1 | nmdc:mga0qj67_184950_c1_39_737 | 231 |
| 11 | 3300050510 | nmdc:mga06r32_115180_c1 | nmdc:mga06r32_115180_c1_629_1327 | 231 |
| 12 | 3300031344 | Ga0265316_10344856 | Ga0265316_103448561 | 234 |
| 13 | 3300047320 | Ga0495672_0036472 | Ga0495672_0036472_725_1477 | 235 |
| 14 | iso_pu_bacteria | 2617270889 | 2617918736 | 236 |
| 15 | iso_pu_bacteria | 2831426010 | 2831426689 | 236 |
| 16 | iso_pu_bacteria | 2848694841 | 2848697020 | 236 |
| 17 | iso_pu_bacteria | 2849660919 | 2849666814 | 236 |
| 18 | iso_pu_bacteria | 2886627955 | 2886628655 | 236 |
| 19 | iso_pu_bacteria | 642555144 | 642601510 | 236 |
| 20 | 3300006847 | Ga0075431_100291162 | Ga0075431_1002911622 | 237 |
| 21 | 3300050510 | nmdc:mga06r32_375681_c1 | nmdc:mga06r32_375681_c1_643_1389 | 237 |
| 22 | 3300046517 | Ga0495630_0001096 | Ga0495630_0001096_17140_17865 | 238 |
| 23 | 3300046689 | Ga0495613_0000803 | Ga0495613_0000803_6525_7250 | 238 |
| 24 | 3300046809 | Ga0495600_0273781 | Ga0495600_0273781_62_796 | 238 |
| 25 | 3300035111 | Ga0373923_0048305 | Ga0373923_0048305_689_1471 | 240 |
| 26 | 3300038705 | Ga0237819_03814 | Ga0237819_03814_1551_2333 | 240 |
| 27 | 3300048916 | Ga0496113_0236104 | Ga0496113_0236104_342_1085 | 240 |
| 28 | 3300005535 | Ga0070684_100365562 | Ga0070684_1003655622 | 241 |
| 29 | 3300005843 | Ga0068860_100295875 | Ga0068860_1002958752 | 241 |
| 30 | 3300010375 | Ga0105239_10113302 | Ga0105239_101133024 | 241 |
| 31 | 3300048912 | Ga0496109_0315978 | Ga0496109_0315978_395_1129 | 241 |
| 32 | iso_pu_bacteria | 2866612099 | 2866614372 | 242 |
| 33 | 3300026095 | Ga0207676_10392444 | Ga0207676_103924442 | 243 |
| 34 | 3300048912 | Ga0496109_0160099 | Ga0496109_0160099_127_873 | 243 |
| 35 | 3300033179 | Ga0307507_10114971 | Ga0307507_101149712 | 244 |
| 36 | 3300046472 | Ga0495580_0233710 | Ga0495580_0233710_312_1058 | 244 |
| 37 | 3300046516 | Ga0495628_0002849 | Ga0495628_0002849_1983_2726 | 244 |
| 38 | 3300046517 | Ga0495630_0176161 | Ga0495630_0176161_569_1321 | 244 |
| 39 | 3300046809 | Ga0495600_0261281 | Ga0495600_0261281_131_877 | 244 |
| 40 | 3300005539 | Ga0068853_100551317 | Ga0068853_1005513172 | 245 |
| 41 | 3300005719 | Ga0068861_100475384 | Ga0068861_1004753842 | 245 |
| 42 | 3300009093 | Ga0105240_10411344 | Ga0105240_104113442 | 245 |
| 43 | 3300009147 | Ga0114129_10568132 | Ga0114129_105681321 | 245 |
| 44 | 3300009147 | Ga0114129_10633729 | Ga0114129_106337292 | 245 |
| 45 | 3300009176 | Ga0105242_10000078 | Ga0105242_1000007827 | 245 |
| 46 | 3300025934 | Ga0207686_10000105 | Ga0207686_1000010529 | 245 |
| 47 | 3300026041 | Ga0207639_10495877 | Ga0207639_104958772 | 245 |
| 48 | 3300046500 | Ga0495596_0031230 | Ga0495596_0031230_1212_1952 | 245 |
| 49 | 3300046684 | Ga0495669_0149797 | Ga0495669_0149797_309_1049 | 245 |
| 50 | 3300048905 | Ga0496102_0000132 | Ga0496102_0000132_2749_3510 | 245 |
| 51 | 3300048906 | Ga0496103_0000077 | Ga0496103_0000077_99655_100416 | 245 |
| 52 | 3300048920 | Ga0496117_0271884 | Ga0496117_0271884_81_842 | 245 |
| 53 | 3300050511 | nmdc:mga08y16_300265_c1 | nmdc:mga08y16_300265_c1_787_1527 | 245 |
| 54 | 3300005539 | Ga0068853_100151293 | Ga0068853_1001512933 | 246 |
| 55 | 3300005548 | Ga0070665_100000106 | Ga0070665_100000106112 | 246 |
| 56 | 3300005578 | Ga0068854_100011765 | Ga0068854_1000117651 | 246 |
| 57 | 3300005841 | Ga0068863_100000021 | Ga0068863_100000021190 | 246 |
| 58 | 3300009098 | Ga0105245_10000016 | Ga0105245_1000001620 | 246 |
| 59 | 3300009553 | Ga0105249_10000616 | Ga0105249_100006166 | 246 |
| 60 | 3300025927 | Ga0207687_10000018 | Ga0207687_10000018204 | 246 |
| 61 | 3300025944 | Ga0207661_10057820 | Ga0207661_100578203 | 246 |
| 62 | 3300025961 | Ga0207712_10000007 | Ga0207712_10000007308 | 246 |
| 63 | 3300026041 | Ga0207639_10125136 | Ga0207639_101251362 | 246 |
| 64 | 3300028563 | Ga0265319_1000693 | Ga0265319_10006935 | 246 |
| 65 | 3300028800 | Ga0265338_10003560 | Ga0265338_100035605 | 246 |
| 66 | 3300031241 | Ga0265325_10005767 | Ga0265325_1000576711 | 246 |
| 67 | 3300041512 | Ga0451853_1628146 | Ga0451853_1628146_2569_3318 | 246 |
| 68 | 3300046454 | Ga0495592_0000657 | Ga0495592_0000657_6446_7195 | 246 |
| 69 | 3300046511 | Ga0495608_0015106 | Ga0495608_0015106_2482_3231 | 246 |
| 70 | 3300046516 | Ga0495628_0034103 | Ga0495628_0034103_3019_3768 | 246 |
| 71 | 3300046533 | Ga0495640_0004808 | Ga0495640_0004808_2701_3450 | 246 |
| 72 | 3300046543 | Ga0495645_0046254 | Ga0495645_0046254_166_915 | 246 |
| 73 | 3300046684 | Ga0495669_0000211 | Ga0495669_0000211_18506_19255 | 246 |
| 74 | 3300046690 | Ga0495624_0000008 | Ga0495624_0000008_85042_85791 | 246 |
| 75 | 3300046694 | Ga0495649_0005093 | Ga0495649_0005093_2379_3128 | 246 |
| 76 | 3300047321 | Ga0495676_0018293 | Ga0495676_0018293_3670_4419 | 246 |
| 77 | 3300047322 | Ga0495680_0011368 | Ga0495680_0011368_803_1552 | 246 |
| 78 | 3300048903 | Ga0496100_0000002 | Ga0496100_0000002_301883_302632 | 246 |
| 79 | 3300048904 | Ga0496101_0000001 | Ga0496101_0000001_301883_302632 | 246 |
| 80 | 3300048907 | Ga0496104_0000009 | Ga0496104_0000009_180055_180804 | 246 |
| 81 | 3300048908 | Ga0496105_0000007 | Ga0496105_0000007_307252_308001 | 246 |
| 82 | 3300048909 | Ga0496106_0000061 | Ga0496106_0000061_48610_49359 | 246 |
| 83 | 3300048910 | Ga0496107_0000013 | Ga0496107_0000013_128927_129676 | 246 |
| 84 | 3300048911 | Ga0496108_0000001 | Ga0496108_0000001_591584_592333 | 246 |
| 85 | 3300048912 | Ga0496109_0000003 | Ga0496109_0000003_266130_266879 | 246 |
| 86 | 3300048928 | Ga0496125_0098813 | Ga0496125_0098813_354_1103 | 246 |
| 87 | 3300053077 | Ga0495601_0000124 | Ga0495601_0000124_37652_38401 | 246 |
| 88 | 3300046663 | Ga0495635_0000016 | Ga0495635_0000016_150235_150987 | 247 |
| 89 | 3300046675 | Ga0495657_0012251 | Ga0495657_0012251_140_892 | 247 |
| 90 | 3300047319 | Ga0495674_0228330 | Ga0495674_0228330_381_1139 | 247 |
| 91 | 3300047322 | Ga0495680_0000773 | Ga0495680_0000773_7785_8537 | 247 |
| 92 | 3300006871 | Ga0075434_100196706 | Ga0075434_1001967062 | 250 |
| 93 | 3300044694 | Ga0466963_0076486 | Ga0466963_0076486_1104_1859 | 250 |
| 94 | 3300044706 | Ga0466964_0061014 | Ga0466964_0061014_281_1036 | 250 |
| 95 | 3300045976 | Ga0466967_0242806 | Ga0466967_0242806_78_833 | 250 |
| 96 | 3300031344 | Ga0265316_10143286 | Ga0265316_101432861 | 252 |
| 97 | 3300005327 | Ga0070658_10047412 | Ga0070658_100474125 | 254 |
| 98 | 3300005336 | Ga0070680_100097900 | Ga0070680_1000979002 | 254 |
| 99 | 3300005458 | Ga0070681_10108136 | Ga0070681_101081362 | 254 |
| 100 | 3300005530 | Ga0070679_100014992 | Ga0070679_1000149925 | 254 |
| 101 | 3300005535 | Ga0070684_100513131 | Ga0070684_1005131311 | 254 |
| 102 | 3300025912 | Ga0207707_10013007 | Ga0207707_100130074 | 254 |
| 103 | 3300025921 | Ga0207652_10012710 | Ga0207652_100127102 | 254 |
| 104 | 3300003373 | JGI25407J50210_10014901 | JGI25407J50210_100149012 | 262 |
| 105 | 3300005981 | Ga0081538_10001246 | Ga0081538_100012469 | 262 |
| 106 | 3300009147 | Ga0114129_10019061 | Ga0114129_1001906111 | 262 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3ege-assembly1.cif.gz_A | crystal structure of putative methyltransferase from antibiotic biosynthesis pathway (yp_324569.1) from anabaena variabilis atcc 29413 at 2.40 a resolution | 0.9242 | 33 | 262 |
| 1ve3-assembly1.cif.gz_A-3 | crystal structure of ph0226 protein from pyrococcus horikoshii ot3 | 0.8625 | 52 | 145 |
| 3ege-assembly1.cif.gz_A | crystal structure of putative methyltransferase from antibiotic biosynthesis pathway (yp_324569.1) from anabaena variabilis atcc 29413 at 2.40 a resolution | 0.8598 | 33 | 262 |
| 2p8j-assembly1.cif.gz_A | crystal structure of s-adenosylmethionine-dependent methyltransferase (np_349143.1) from clostridium acetobutylicum at 2.00 a resolution | 0.8205 | 34 | 140 |
| 7cpx-assembly1.cif.gz_A | lovastatin nonaketide synthase | 0.819 | 51 | 140 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q54QA3_21_266_3.40.50.150 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.9402 | 25 | 262 | 3.40.50.150 |
| 3egeA00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.9159 | 33 | 262 | 3.40.50.150 |
| af_Q54QA3_21_266_3.40.50.150 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.9069 | 25 | 262 | 3.40.50.150 |
| af_A0A0R0KEN7_127_277_3.40.50.150 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.8968 | 90 | 138 | 3.40.50.150 |
| 3egeA00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.8587 | 33 | 262 | 3.40.50.150 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A6L8BA31-F1-model_v4 | Class I SAM-dependent methyltransferase | 0.9891 | 40 | 117 |
GO:0008757
GO:0032259 |
| AF-A0A4R2IPT6-F1-model_v4 | Methyltransferase family protein | 0.9811 | 20 | 261 |
GO:0008757
GO:0032259 |
| AF-A0A1H4I960-F1-model_v4 | DNA-binding transcriptional regulator, MerR family | 0.9803 | 22 | 123 |
GO:0003677
GO:0003700 GO:0008757 |
| AF-A0A7W7CSF4-F1-model_v4 | DNA-binding transcriptional MerR regulator | 0.9776 | 21 | 261 |
GO:0003677
GO:0003700 GO:0008757 |
| AF-A0A7W1I7B2-F1-model_v4 | Class I SAM-dependent methyltransferase | 0.9764 | 21 | 262 |
GO:0008757
GO:0032259 |
Predicted Structure (AlphaFold2)
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