Sample Metadata
3300026545
General
| Taxon Oid |
3300026545
|
| Ncbi Domain |
*Microbiome |
| Sequencing Status |
Complete |
| Study Name |
Army ant gut microbial communities |
| Genome Name Sample Name |
Army ant gut microbial communities from Eciton burchelli, Santa Rosa, Costa Rica - colony SREbp1 |
| Img Genome Id |
3300026545 |
Project / Publication
| Gold Analysis Project Id |
Ga0255574
|
| Gold Sequencing Project Id |
Gp0293943
|
| Gold Study Id |
Gs0085487
|
| Is Published |
0 |
| Add Date |
04/20/2018 |
| Public Release Date |
03/04/2022 |
Environment / Ecosystem
| Ecosystem |
Host-associated |
| Ecosystem Category |
Arthropoda: Insects |
| Ecosystem Subtype |
Gut |
| Ecosystem Type |
Digestive system |
| Specific Ecosystem |
Unclassified |
| Habitat |
Army ant gut |
Sampling / Conditions
| Geographic Location |
Santa Rosa, Costa Rica |
| Isolation Country |
8723 |
| Latitude |
10.85 |
| Longitude |
-85.62 |
| Sample Collection Date |
2015/8/8 |
Assembly
| Genome Size Assembled |
207318456 |
| Gene Count Assembled |
221290 |
| Sequencing Strategy |
Metagenome |
Other Metadata
| Alt2 Contact Emails |
[email protected] |
| Alt2 Contact Names |
Jacob Russell |
| Assembly Method |
IDBA-UD v. 1.1.1 |
| Comments |
released by JGI data releasing policy |
| Contact Email |
[email protected] |
| Contact Name |
Jacob Russell |
| Cultured |
0 |
| Gold Analysis Project Type |
Metagenome Analysis |
| Has Coverage |
1 |
| Host Name |
Eciton |
| Img Release Pipeline Version |
IMG Annotation Pipeline v.4.16.2 |
| Img Submission Id |
184363 |
| In File |
Yes |
| Isolation |
Army ant gut tissue |
| Rnd Project |
1 |
| Sequencing Center |
University of California, Berkeley |
| Sequencing Method |
Illumina HiSeq 4000 |
| Submission Type |
Primary |
| Submitter Name |
Yi Hu |