Sample Metadata
2761201754
General
| Taxon Oid |
2761201754
|
| Ncbi Domain |
Eukaryota |
| Sequencing Status |
Permanent Draft |
| Study Name |
Yeast-based biofuel production - 2 xylose fermenting fungi |
| Genome Name Sample Name |
Yamadazyma tenuis ATCC 10573 |
| Img Genome Id |
2761201754 |
Taxonomy
| Ncbi Phylum |
Ascomycota |
| Ncbi Class |
Pichiomycetes |
| Ncbi Order |
Serinales |
| Ncbi Family |
Debaryomycetaceae |
| Ncbi Genus |
Yamadazyma |
| Ncbi Species |
Yamadazyma tenuis |
Project / Publication
| Gold Analysis Project Id |
Ga0228435
|
| Gold Sequencing Project Id |
Gp0016931
|
| Gold Study Id |
Gs0034908
|
| Pubmed Id |
21788494 |
| Is Published |
1 |
| Add Date |
11/30/2017 |
| Public Release Date |
12/18/2017 |
Environment / Ecosystem
| Ecosystem |
Host-associated |
| Ecosystem Category |
Arthropoda: Insects |
| Ecosystem Subtype |
Unclassified |
| Ecosystem Type |
Unclassified |
| Specific Ecosystem |
Unclassified |
Assembly
| Genome Size Assembled |
10741968 |
| Gene Count Assembled |
5533 |
| Sequencing Strategy |
Whole Genome Sequencing |
Other Metadata
| Alt2 Contact Emails |
[email protected] |
| Alt2 Contact Names |
Audrey Gasch |
| Comments |
Set high_quality_flag = Yes for all non-obsolete euks, per Natalia I; KP 03-28-18 |
| Contact Email |
[email protected] |
| Contact Name |
Audrey Gasch |
| Culture Type |
Isolate |
| Cultured |
1 |
| Diseases |
Paratuberculosis, Candidemia |
| Funding Program |
GLBRC |
| Funding Year |
2008 |
| Gold Analysis Project Type |
Genome Analysis (Isolate) |
| Has Coverage |
0 |
| High Quality |
1 |
| Img Submission Id |
166822 |
| In File |
No |
| Isolation |
bark-beetle |
| Ncbi Bioproject Accession |
PRJNA33673 |
| Ncbi Biosample Accession |
SAMN00715317 |
| Ncbi Strain |
ATCC 10573 |
| Ncbi Taxon Id |
590646 |
| Phenotype |
Pathogen |
| Pmo Project Id |
400298 |
| Rnd Project |
1 |
| Sequencing Center |
DOE Joint Genome Institute (JGI) |
| Sequencing Method |
Sanger |
| Sequencing Stat |
Complete |
| Submission Type |
Primary |
| Type Strain |
Yes |