Sample Metadata
2756170388
General
| Taxon Oid |
2756170388
|
| Ncbi Domain |
Archaea |
| Sequencing Status |
Permanent Draft |
| Study Name |
Genomic Encyclopedia of Type Strains, Phase IV (KMG-IV): sequencing the most valuable type-strain genomes for metagenomic binning, comparative biology and taxonomic classification |
| Genome Name Sample Name |
Methanimicrococcus blatticola DSM 13328 |
| Img Genome Id |
2756170388 |
Taxonomy
| Ncbi Phylum |
Methanobacteriota |
| Ncbi Class |
Methanomicrobia |
| Ncbi Order |
Methanosarcinales |
| Ncbi Family |
Methanosarcinaceae |
| Ncbi Genus |
Methanimicrococcus |
| Ncbi Species |
Methanimicrococcus blatticola |
Project / Publication
| Gold Analysis Project Id |
Ga0215689
|
| Gold Sequencing Project Id |
Gp0251965
|
| Gold Study Id |
Gs0131304
|
| Is Published |
0 |
| Add Date |
10/26/2017 |
| Public Release Date |
11/07/2017 |
Environment / Ecosystem
| Ecosystem |
Host-associated |
| Ecosystem Category |
Arthropoda: Insects |
| Ecosystem Subtype |
Hindgut |
| Ecosystem Type |
Digestive system |
| Specific Ecosystem |
Unclassified |
Assembly
| Genome Size Assembled |
1783317 |
| Gene Count Assembled |
1615 |
| Sequencing Strategy |
Whole Genome Sequencing |
Other Metadata
| Alt2 Contact Emails |
[email protected]; [email protected] |
| Alt2 Contact Names |
Hans-Peter Klenk; Markus Göker |
| Ani Cluster Id |
5278 |
| Ani Cluster Type |
clique |
| Assembly Method |
SPAdes v. 3.10.1 |
| Award Doi |
10.46936/10.25585/60001087 |
| Contact Email |
[email protected] |
| Contact Name |
Markus Göker |
| Culture Type |
Isolate |
| Cultured |
1 |
| Funding Program |
CSP |
| Funding Year |
2017 |
| Genbank Anomalous Assembly |
No |
| Gold Analysis Project Type |
Genome Analysis (Isolate) |
| Gtdb Class |
Methanosarcinia |
| Gtdb Domain |
Archaea |
| Gtdb Family |
Methanosarcinaceae |
| Gtdb Genus |
Methanimicrococcus |
| Gtdb Order |
Methanosarcinales |
| Gtdb Phylum |
Halobacteriota |
| Gtdb Species |
Methanimicrococcus blatticola |
| Has Coverage |
0 |
| High Quality |
1 |
| Host Name |
Periplaneta americana |
| Img Release Pipeline Version |
IMG Annotation Pipeline v.4.15.2 |
| Img Submission Id |
158595 |
| In File |
No |
| Isolation |
Hindgut of the cockroach |
| Ncbi Assembly Accession |
GCA_004363215.1 |
| Ncbi Bioproject Accession |
PRJNA439858 |
| Ncbi Biosample Accession |
SAMN08769569 |
| Ncbi Genbank Id |
SNYS00000000 |
| Ncbi Strain |
DSM 13328 |
| Ncbi Taxon Id |
91560 |
| Rnd Project |
1 |
| Sequencing Center |
DOE Joint Genome Institute (JGI) |
| Sequencing Method |
Illumina HiSeq 2500-1TB |
| Sequencing Quality |
Level 1: Standard Draft |
| Sequencing Stat |
Complete |
| Submission Type |
Primary |
| Submitter Name |
Galina Ovchinnikova |
| Type Strain |
Yes |