Sample Metadata
2228664003
General
| Taxon Oid |
2228664003
|
| Ncbi Domain |
*Microbiome |
| Sequencing Status |
Draft |
| Study Name |
Laboratory Nasutitermes corniger gut microbial communities from Florida, USA |
| Genome Name Sample Name |
P3 Gut Segment Termite Single Cell Genome_Treponema sp. T4b from Florida, USA |
| Img Genome Id |
2228664003 |
Project / Publication
| Gold Analysis Project Id |
Ga0026529
|
| Gold Sequencing Project Id |
Gp0053962
|
| Gold Study Id |
Gs0045327
|
| Is Published |
0 |
| Add Date |
11/20/2011 |
| Public Release Date |
03/25/2022 |
Environment / Ecosystem
| Ecosystem |
Host-associated |
| Ecosystem Category |
Arthropoda: Insects |
| Ecosystem Subtype |
Hindgut |
| Ecosystem Type |
Digestive system |
| Specific Ecosystem |
Paunch/P3 segment |
| Habitat |
Laboratory Nasutitermes corniger gut |
Sampling / Conditions
| Geographic Location |
Florida, USA |
| Isolation Country |
8855 |
| Latitude |
26.135 |
| Longitude |
-80.129 |
| Sample Collection Date |
2008/3/23 |
Assembly
| Genome Size Assembled |
8529942 |
| Gene Count Assembled |
23486 |
| Sequencing Strategy |
Metagenome |
Other Metadata
| Alt2 Contact Emails |
[email protected]; [email protected] |
| Alt2 Contact Names |
Phil Hugenholtz; Susannah Tringe |
| Assembly Method |
Newbler, Velvet |
| Comments |
released based on JGI ITS |
| Contact Email |
[email protected] |
| Contact Name |
Phil Hugenholtz |
| Cultured |
0 |
| Elevation In Meters |
10.000000 |
| Funding Agency |
Energy Biosciences Institute |
| Funding Program |
DD |
| Funding Year |
2009 |
| Gold Analysis Project Type |
Metagenome Analysis |
| Has Coverage |
0 |
| Host Name |
Nasutitermes |
| Img Submission Id |
6429 |
| In File |
Yes |
| Isolation |
Flow sorted Termite Single Cells from Nasutitermes corniger |
| Ncbi Bioproject Accession |
PRJNA336712 |
| Ncbi Biosample Accession |
SAMN05518643 |
| Pmo Project Id |
403331 |
| Rnd Project |
1 |
| Sequencing Center |
DOE Joint Genome Institute (JGI) |
| Sequencing Method |
454 GS FLX Titanium, Illumina GAIIx |
| Submission Type |
Primary |
| Submitter Name |
Stephanie Malfatti |