Protein Family IF03523

Metagenome Isolate
150 Members
46 Samples
145 Scaffolds
315.1 Avg Length

🧬 Representative Sequence

ID
3300010882|Ga0123354_10198337|Ga0123354_101983372
Length
357 aa
Sequence
MPEIVVPGESMIFSEPPISAESPISRGDDLESKKTVNGLVIRGSRNLFTVRICDSGEILECRIKGKILKNTEAYYNPLAPGDVVEVEGNLILGLAKRRNLFVRFNQKGQLPQILASNVDLVLCVTSFASPPFRPRFIDRVLLQADEAGIPAAIVCNKCDLVHNSDPDEVLDIEERLSDFQRIGFPVLRLSARTKEGLDELRNFIAGKFSVLIGQSGVGKSSLIRALAPDLELKTGAVNEKYDRGNHTTTQPVLLDVPDADGNPCGSRIIDTPGIRRFALAGIRAEDLILYMREFAPLAGKCSYGLSCSHKTEPGCKIMEAVTAGVIHEDRYISYLRIREELEGEDPAGRESAGKRS*

📊 Sample Types

Isolate 3.3%
Metagenome 96.7%
MAG 0.0%
Metatranscriptome 0.0%
Single Cell 0.0%

🐛 Taxa Family Distribution

Termitidae 44.4%
Kalotermitidae 31.1%
Unclassified 13.3%
Rhinotermitidae 6.7%
Termopsidae 4.4%

🌳 Taxonomy

Archaea 1
Bacteria 142
Eukaryota 0
Viruses 0
Unclassified 7

🗂️ Samples

#Sample IDDescriptionTypeTaxa Family
1 2781125639 Treponema sp. Co191P1bin44 Isolate Unclassified
2 3300042643 Termite gut microbial communities of Glyptotermes sp. from Ebogo I, Mbalmayo, Cameroon - Gx481 Metagenome Kalotermitidae
3 3300042648 Termite gut microbial communities of Incisitermes snyderi from Fort Lauderdale Research & Education Center, Florida, USA - Iy174 Metagenome Kalotermitidae
4 3300042656 Termite gut microbial communities of Trinervitermes sp. from JKUAT Farm, Juja, Kenya - TD114a Metagenome Termitidae
5 3300042596 Termite gut microbial communities of Calcaritermes temnocephalus from Boquisco, Panama - Ct408 Metagenome Kalotermitidae
6 3300042605 Termite gut microbial communities of Neotermes cubanus from Parque Nacional Topes de Collantes, Sierra del Escambray, Cuba - Ncb351 Metagenome Kalotermitidae
7 3300042616 Termite gut microbial communities of Neotermes castaneus from BAM Federal Institute for Materials Research and Testing, Berlin, Germany - Nc350 Metagenome Kalotermitidae
8 2781125691 Treponema sp. Th196P3bin73 Isolate Unclassified
9 3300042594 Termite gut microbial communities of Coatitermes kartaboensis from Petit Saut, French Guiana, France - Coa324 Metagenome Termitidae
10 3300042600 Termite gut microbial communities of Euhamitermes sp. from Bubeng, China - Ehx436 Metagenome Termitidae
11 3300042612 Termite gut microbial communities of Glyptotermes sp. from Ebogo II, Mbalmayo, Cameroon - Gx485 Metagenome Kalotermitidae
12 3300042617 Termite gut microbial communities of Nasutitermes lujae from Ebogo II, Mbalmayo, Cameroon - Nl494 Metagenome Termitidae
13 2781125662 Treponema sp. Emb289P3bin141 Isolate Unclassified
14 3300002449 Microcerotermes parvus P3 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Mp193 P3 Metagenome Termitidae
15 3300002462 Microcerotermes parvus P4 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Th196 P4 Metagenome Termitidae
16 3300042636 Termite gut microbial communities of Glyptotermes sp. from Thung Chang, Thailand - Gsp477 Metagenome Kalotermitidae
17 3300041968 Termite hindgut microbial communities from Coptotermes formosanus workers in Fort Lauderdale, Florida, USA - CFCB1 Metagenome Rhinotermitidae
18 3300042592 Termite gut microbial communities of Cornitermes pugnax from Petit Saut, French Guiana, France - Co333 Metagenome Termitidae
19 3300042604 Termite gut microbial communities of Neocapritermes taracua from Petit Saut, French Guiana, France - Nct323 Metagenome Termitidae
20 3300042615 Termite gut microbial communities of Kalotermes flavicollis from BAM Federal Institute for Materials Research and Testing, Berlin, Germany - Kf353 Metagenome Kalotermitidae
21 3300024493 Termite gut microbial communities from Nasutitermes sp. lab. nest, Belvaux, Luxembourg - LM_1_8 metagenomics Metagenome
22 3300042655 Termite gut microbial communities of Porotermes quadricollis from Region del Maule, Estero Los Robles, Chile - Pq454 Metagenome Termopsidae
23 3300042590 Termite gut microbial communities of Cryptotermes cavifrons from Fort Lauderdale Research & Education Center, Florida, USA - Cc175 Metagenome Kalotermitidae
24 3300042593 Termite gut microbial communities of Cryptotermes dudleyi from BAM Federal Institute for Materials Research and Testing, Berlin, Germany - Cd354 Metagenome Kalotermitidae
25 3300042606 Termite gut microbial communities of Neotermes meruensis from Talek, Kenya - Nm470 Metagenome Kalotermitidae
26 3300042619 Termite gut microbial communities of Porotermes adamsoni from near Lamington National Park, Queensland, Australia - Po218 Metagenome Termopsidae
27 2781125666 Treponema sp. Emb289P4bin7 Isolate Unclassified
28 3300002450 Cornitermes sp. P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Co191 P3 Metagenome Termitidae
29 3300010049 Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3 Metagenome Termitidae
30 3300010167 Labiotermes labralis P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P3 Metagenome Termitidae
31 3300010882 Labiotermes labralis P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P4 Metagenome Termitidae
32 3300042652 Termite gut microbial communities of Incisitermes marginipennis from BAM Federal Institute for Materials Research and Testing, Berlin, Germany - Im510 Metagenome Kalotermitidae
33 3300042591 Termite gut microbial communities of Coptotermes formosanus from BAM Federal Institute for Materials Research and Testing, Berlin, Germany - Cf509 Metagenome Rhinotermitidae
34 3300042597 Termite gut microbial communities of Cylindrotermes parvignathus from Petit Saut, French Guiana, France - Cyl330 Metagenome Termitidae
35 3300042603 Termite gut microbial communities of Macrotermes cf. amplus from Northern Cameroon, Cameroon - Mx356 Metagenome Termitidae
36 3300042607 Termite gut microbial communities of Nasutitermes c.f. ephratae from Petit Saut, French Guiana, France - Nx346 Metagenome Termitidae
37 3300042614 Termite gut microbial communities of Microcerotermes sp. from Ebogo II, Mbalmayo, Cameroon - Mcx344 Metagenome Termitidae
38 3300042618 Termite gut microbial communities of Procryptotermes leewardensis from Pointe de la Grande Vigie, Guadeloupe, France - Pcl387 Metagenome Kalotermitidae
39 3300005485 Termite gut microbial communities from Costa Rica - P3 luminal contents Metagenome Termitidae
40 3300009784 Embiratermes neotenicus P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P4 Metagenome Termitidae
41 650716099 Leadbettera azotonutricia ZAS-9 Isolate Unclassified
42 3300000089 Insect hindgut associated microbial communities from Australia - Nasutitermes Metagenome Termitidae
43 3300005200 Nasutitermes gut metagenome Metagenome Termitidae
44 3300042601 Termite gut microbial communities of Hodotermopsis sjoestedti from Tam Dao National Park, Vietnam - Hs463 Metagenome Unclassified
45 3300042609 Termite gut microbial communities of Prorhinotermes canalifrons from BAM Federal Institute for Materials Research and Testing, Berlin, Germany - Pc512 Metagenome Rhinotermitidae
46 3300042620 Termite gut microbial communities of Roisinitermes ebogoensis from Ebogo II, Mbalmayo, Cameroon - Roe453 Metagenome Kalotermitidae

🔗 Scaffolds

#ScaffoldSampleTaxonomyLength
1 Ga0466705_230392 3300042612 Bacteria 7384
2 Ga0466704_189791 3300042643 Bacteria 4635
3 Ga0466704_579181 3300042643 Bacteria 7842
4 Ga0466709_145655 3300042648 Bacteria 8863
5 Ga0466708_443463 3300042652 Bacteria 18075
6 Ga0264413_124295 3300024493 Bacteria 2675
7 Ga0466690_406989 3300042590 Bacteria 18924
8 Ga0466692_007953 3300042591 Bacteria 14826
9 Ga0466693_039738 3300042592 Bacteria 38800
10 Ga0466694_105495 3300042594 Bacteria 6347
11 Ga0123353_10307434 3300010167 Bacteria 2415
12 Ga0466712_009561 3300042614 Bacteria 1853
13 Ga0466715_121594 3300042616 Bacteria 15881
14 Ga0466719_135362 3300042606 Bacteria 51759
15 Ga0466720_114818 3300042607 Bacteria 4086
16 Ga0466720_166109 3300042607 Bacteria 43631
17 Ga0466703_365670 3300042636 Bacteria 18078
18 Ga0466709_388281 3300042648 Bacteria 5336
19 Ga0466708_099644 3300042652 Bacteria 15664
20 Ga0466708_256221 3300042652 Bacteria 41119
21 AustNasuHG_c1000381 3300000089 Bacteria 15405
22 JGI24695J34938_10004628 3300002450 Unclassified 8941
23 JGI24702J35022_10000901 3300002462 Bacteria 18491
24 Ga0456237_0002246 3300041968 Bacteria 3125
25 Ga0466690_239781 3300042590 Bacteria 6810
26 Ga0466692_027093 3300042591 Bacteria 6529
27 Ga0466692_105814 3300042591 Bacteria 14161
28 Ga0466696_345964 3300042596 Bacteria 1197
29 Ga0466696_361474 3300042596 Bacteria 23704
30 Ga0123357_10235576 3300009784 Bacteria 1995
31 Ga0123356_10001661 3300010049 Bacteria 24345
32 Ga0466712_021448 3300042614 Unclassified 2882
33 Ga0466726_052953 3300042619 Bacteria 1581
34 Ga0466726_178021 3300042619 Bacteria 2010
35 Ga0466714_079819 3300042603 Bacteria 1558
36 Ga0466716_172173 3300042605 Bacteria 3639
37 Ga0466719_167098 3300042606 Bacteria 38069
38 Ga0466720_060993 3300042607 Bacteria 6504
39 Ga0466722_113600 3300042609 Bacteria 5015
40 Ga0466732_130649 3300042656 Bacteria 2173
41 Ga0466704_040439 3300042643 Bacteria 12833
42 Ga0466704_453600 3300042643 Bacteria 12725
43 Ga0264413_115063 3300024493 Bacteria 2259
44 Ga0466699_037358 3300042597 Bacteria 8810
45 Ga0466699_149156 3300042597 Bacteria 6109
46 Ga0466699_172193 3300042597 Bacteria 17697
47 Ga0466699_203574 3300042597 Bacteria 13311
48 Ga0466699_341633 3300042597 Bacteria 2679
49 Ga0466711_310639 3300042615 Bacteria 1539
50 Ga0466723_145089 3300042618 Bacteria 3966
51 Ga0466728_457778 3300042620 Bacteria 4632
52 Ga0466719_270082 3300042606 Bacteria 12265
53 Ga0466719_404610 3300042606 Bacteria 6017
54 Ga0466720_029531 3300042607 Bacteria 7960
55 Ga0466722_012711 3300042609 Bacteria 2685
56 Ga0466722_123195 3300042609 Bacteria 6152
57 Ga0466732_015875 3300042656 Bacteria 7251
58 Ga0466732_107841 3300042656 Bacteria 2295
59 Ga0466732_232683 3300042656 Bacteria 2377
60 Ga0466704_503754 3300042643 Unclassified 3053
61 AustNasuHG_c1000821 3300000089 Bacteria 11164
62 JGI24698J34947_10015665 3300002449 Unclassified 4125
63 JGI24698J34947_10018467 3300002449 Bacteria 3766
64 Ga0123357_10000086 3300009784 Bacteria 74198
65 Ga0456237_0002702 3300041968 Bacteria 2864
66 Ga0466690_311152 3300042590 Bacteria 2855
67 Ga0466691_109255 3300042593 Unclassified 4895
68 Ga0466691_140238 3300042593 Bacteria 5444
69 Ga0466699_437941 3300042597 Unclassified 1913
70 Ga0123353_10253566 3300010167 Bacteria 2723
71 Ga0466705_518563 3300042612 Bacteria 2170
72 Ga0466718_158064 3300042617 Bacteria 7593
73 Ga0466723_226359 3300042618 Bacteria 25872
74 Ga0466728_177916 3300042620 Bacteria 11102
75 Ga0466700_442406 3300042600 Bacteria 3835
76 Ga0466717_133062 3300042604 Bacteria 1275
77 Ga0466704_504366 3300042643 Bacteria 5464
78 Ga0466708_019672 3300042652 Bacteria 21852
79 Ga0466727_179235 3300042655 Bacteria 6462
80 JGI24698J34947_10024238 3300002449 Bacteria 3242
81 JGI24698J34947_10026755 3300002449 Bacteria 3063
82 JGI24698J34947_10050883 3300002449 Bacteria 2087
83 Ga0466690_077089 3300042590 Bacteria 2190
84 Ga0466694_405696 3300042594 Bacteria 6106
85 Ga0466699_252942 3300042597 Bacteria 4405
86 Ga0466699_373467 3300042597 Bacteria 13082
87 Ga0123353_10127056 3300010167 Bacteria 4097
88 Ga0466711_047431 3300042615 Bacteria 2054
89 Ga0466715_222045 3300042616 Bacteria 16267
90 Ga0466715_228342 3300042616 Bacteria 7988
91 Ga0466715_598120 3300042616 Bacteria 2841
92 Ga0466728_402767 3300042620 Bacteria 1239
93 Ga0466728_403211 3300042620 Bacteria 1246
94 Ga0466700_378297 3300042600 Bacteria 1281
95 Ga0466720_033079 3300042607 Bacteria 4516
96 Ga0466720_122115 3300042607 Bacteria 6974
97 Ga0466722_070206 3300042609 Bacteria 3861
98 Ga0466722_113723 3300042609 Bacteria 8000
99 Ga0466705_168290 3300042612 Bacteria 7095
100 Ga0466704_055522 3300042643 Bacteria 5656
101 Ga0466709_046436 3300042648 Bacteria 20510
102 Ga0466709_242276 3300042648 Bacteria 7779
103 Ga0466709_296676 3300042648 Archaea 2419
104 Ga0466708_130839 3300042652 Bacteria 2081
105 Ga0466708_292864 3300042652 Bacteria 5851
106 AustNasuHG_c1001125 3300000089 Bacteria 9641
107 Ga0072940_1041384 3300005200 Bacteria 5706
108 Ga0466692_181196 3300042591 Bacteria 22949
109 Ga0466694_345201 3300042594 Bacteria 1559
110 Ga0466699_044728 3300042597 Bacteria 8880
111 Ga0466711_037493 3300042615 Bacteria 20686
112 Ga0466715_113224 3300042616 Bacteria 18533
113 Ga0466723_001141 3300042618 Bacteria 10234
114 Ga0466723_011647 3300042618 Bacteria 4614
115 Ga0466723_156541 3300042618 Bacteria 4229
116 Ga0466726_235532 3300042619 Bacteria 3538
117 Ga0466720_107943 3300042607 Bacteria 17319
118 Ga0466722_224275 3300042609 Bacteria 14535
119 Ga0466704_558037 3300042643 Bacteria 27638
120 Ga0466727_200742 3300042655 Bacteria 2665
121 Ga0074263_101355 3300005485 Bacteria 3084
122 Ga0466690_119517 3300042590 Bacteria 9956
123 Ga0466696_468967 3300042596 Bacteria 2598
124 Ga0466699_107752 3300042597 Bacteria 12714
125 Ga0466699_117378 3300042597 Bacteria 9771
126 Ga0123353_10252786 3300010167 Bacteria 2728
127 Ga0123353_10657377 3300010167 Bacteria 1482
128 Ga0466711_220603 3300042615 Bacteria 23001
129 Ga0466715_249703 3300042616 Bacteria 5161
130 Ga0466715_368424 3300042616 Bacteria 3830
131 Ga0466715_631188 3300042616 Bacteria 7735
132 Ga0466719_181498 3300042606 Bacteria 2934
133 Ga0466703_208555 3300042636 Bacteria 5682
134 Ga0466709_052570 3300042648 Bacteria 1432
135 Ga0466708_030601 3300042652 Bacteria 4183
136 Ga0466727_103085 3300042655 Bacteria 1806
137 JGI24698J34947_10043531 3300002449 Bacteria 2301
138 Ga0466694_063179 3300042594 Bacteria 12695
139 Ga0123357_10182126 3300009784 Bacteria 2449
140 Ga0123353_10059307 3300010167 Bacteria 6136
141 Ga0123354_10198337 3300010882 Bacteria 2217
142 Ga0466705_528511 3300042612 Bacteria 1786
143 Ga0466715_027504 3300042616 Bacteria 3740
144 Ga0466707_238136 3300042601 Bacteria 1390
145 Ga0466720_033882 3300042607 Unclassified 2132

📋 Family Sequences

#SampleScaffoldProteinLength (aa)
1 3300042593 Ga0466691_109255 Ga0466691_109255_1550_2308 252
2 3300042619 Ga0466726_052953 Ga0466726_052953_237_1046 269
3 3300042643 Ga0466704_189791 Ga0466704_189791_2480_3298 272
4 3300042620 Ga0466728_177916 Ga0466728_177916_10_888 292
5 3300042616 Ga0466715_631188 Ga0466715_631188_3980_4900 293
6 3300042617 Ga0466718_158064 Ga0466718_158064_3348_4247 299
7 3300002449 JGI24698J34947_10015665 JGI24698J34947_100156652 301
8 3300002449 JGI24698J34947_10050883 JGI24698J34947_100508832 301
9 3300042597 Ga0466699_044728 Ga0466699_044728_6495_7400 301
10 3300042597 Ga0466699_107752 Ga0466699_107752_5468_6373 301
11 3300042597 Ga0466699_117378 Ga0466699_117378_2522_3427 301
12 3300042597 Ga0466699_172193 Ga0466699_172193_4920_5825 301
13 3300042597 Ga0466699_373467 Ga0466699_373467_5295_6200 301
14 3300042597 Ga0466699_437941 Ga0466699_437941_837_1742 301
15 3300042612 Ga0466705_230392 Ga0466705_230392_1532_2443 303
16 3300042594 Ga0466694_405696 Ga0466694_405696_4754_5668 304
17 3300042597 Ga0466699_149156 Ga0466699_149156_4079_4993 304
18 3300042606 Ga0466719_404610 Ga0466719_404610_3624_4601 304
19 3300042590 Ga0466690_311152 Ga0466690_311152_478_1419 305
20 3300042606 Ga0466719_270082 Ga0466719_270082_5226_6143 305
21 3300042616 Ga0466715_249703 Ga0466715_249703_3392_4309 305
22 iso_pr_bacteria 2781125666 2781343341 305
23 iso_pr_bacteria 650716099 650878507 305
24 3300009784 Ga0123357_10000086 Ga0123357_1000008671 306
25 3300042590 Ga0466690_406989 Ga0466690_406989_9808_10728 306
26 3300042618 Ga0466723_001141 Ga0466723_001141_2725_3645 306
27 3300042619 Ga0466726_178021 Ga0466726_178021_583_1503 306
28 3300005200 Ga0072940_1041384 Ga0072940_10413843 307
29 3300042609 Ga0466722_113600 Ga0466722_113600_1171_2124 307
30 3300042648 Ga0466709_388281 Ga0466709_388281_2860_3783 307
31 3300042616 Ga0466715_368424 Ga0466715_368424_2681_3637 308
32 3300042643 Ga0466704_453600 Ga0466704_453600_11732_12658 308
33 3300042648 Ga0466709_296676 Ga0466709_296676_854_1780 308
34 3300042590 Ga0466690_077089 Ga0466690_077089_947_1876 309
35 3300042606 Ga0466719_135362 Ga0466719_135362_50337_51266 309
36 3300042616 Ga0466715_121594 Ga0466715_121594_2594_3523 309
37 3300042652 Ga0466708_019672 Ga0466708_019672_4763_5692 309
38 3300042652 Ga0466708_099644 Ga0466708_099644_11510_12439 309
39 3300000089 AustNasuHG_c1000821 AustNasuHG_10008213 310
40 3300010167 Ga0123353_10657377 Ga0123353_106573772 310
41 3300042606 Ga0466719_167098 Ga0466719_167098_26802_27734 310
42 3300042607 Ga0466720_166109 Ga0466720_166109_18914_19891 310
43 3300042656 Ga0466732_015875 Ga0466732_015875_808_1740 310
44 3300042597 Ga0466699_341633 Ga0466699_341633_1180_2115 311
45 3300042609 Ga0466722_123195 Ga0466722_123195_2618_3553 311
46 3300042636 Ga0466703_208555 Ga0466703_208555_3803_4738 311
47 3300002449 JGI24698J34947_10018467 JGI24698J34947_100184673 312
48 3300009784 Ga0123357_10182126 Ga0123357_101821262 312
49 3300042609 Ga0466722_070206 Ga0466722_070206_849_1787 312
50 3300042609 Ga0466722_113723 Ga0466722_113723_452_1390 312
51 3300042614 Ga0466712_009561 Ga0466712_009561_559_1497 312
52 3300042614 Ga0466712_021448 Ga0466712_021448_1095_2033 312
53 3300042615 Ga0466711_310639 Ga0466711_310639_163_1101 312
54 3300042643 Ga0466704_040439 Ga0466704_040439_11642_12580 312
55 3300042652 Ga0466708_292864 Ga0466708_292864_3949_4887 312
56 3300042655 Ga0466727_200742 Ga0466727_200742_572_1510 312
57 iso_pr_bacteria 2781125662 2781337171 312
58 3300002449 JGI24698J34947_10024238 JGI24698J34947_100242382 313
59 3300002449 JGI24698J34947_10026755 JGI24698J34947_100267552 313
60 3300002449 JGI24698J34947_10043531 JGI24698J34947_100435312 313
61 3300010049 Ga0123356_10001661 Ga0123356_1000166128 313
62 3300041968 Ga0456237_0002246 Ga0456237_0002246_1911_2852 313
63 3300042591 Ga0466692_027093 Ga0466692_027093_904_1890 313
64 3300042592 Ga0466693_039738 Ga0466693_039738_26347_27288 313
65 3300042652 Ga0466708_443463 Ga0466708_443463_14470_15411 313
66 iso_pr_bacteria 2781125639 2781285472 313
67 3300002450 JGI24695J34938_10004628 JGI24695J34938_100046282 314
68 3300042597 Ga0466699_252942 Ga0466699_252942_1689_2633 314
69 3300042616 Ga0466715_113224 Ga0466715_113224_8795_9763 314
70 iso_pr_bacteria 2781125691 2781429948 314
71 3300010167 Ga0123353_10252786 Ga0123353_102527862 315
72 3300042609 Ga0466722_012711 Ga0466722_012711_245_1192 315
73 3300042618 Ga0466723_226359 Ga0466723_226359_19735_20682 315
74 3300042652 Ga0466708_030601 Ga0466708_030601_2134_3081 315
75 3300042652 Ga0466708_130839 Ga0466708_130839_922_1869 315
76 3300010167 Ga0123353_10127056 Ga0123353_101270565 316
77 3300041968 Ga0456237_0002702 Ga0456237_0002702_1633_2583 316
78 3300042591 Ga0466692_181196 Ga0466692_181196_2747_3697 316
79 3300042593 Ga0466691_140238 Ga0466691_140238_4187_5137 316
80 3300042594 Ga0466694_063179 Ga0466694_063179_7877_8827 316
81 3300042594 Ga0466694_105495 Ga0466694_105495_2460_3410 316
82 3300042594 Ga0466694_345201 Ga0466694_345201_73_1023 316
83 3300042605 Ga0466716_172173 Ga0466716_172173_2037_2987 316
84 3300042643 Ga0466704_579181 Ga0466704_579181_6209_7159 316
85 3300042643 Ga0466704_055522 Ga0466704_055522_1982_2989 317
86 3300042656 Ga0466732_130649 Ga0466732_130649_990_1943 317
87 3300010167 Ga0123353_10307434 Ga0123353_103074342 318
88 3300042603 Ga0466714_079819 Ga0466714_079819_155_1111 318
89 3300042604 Ga0466717_133062 Ga0466717_133062_35_991 318
90 3300042607 Ga0466720_060993 Ga0466720_060993_3107_4063 318
91 3300042612 Ga0466705_168290 Ga0466705_168290_3499_4455 318
92 3300000089 AustNasuHG_c1000381 AustNasuHG_10003815 319
93 3300009784 Ga0123357_10235576 Ga0123357_102355762 319
94 3300042590 Ga0466690_239781 Ga0466690_239781_993_1952 319
95 3300042596 Ga0466696_345964 Ga0466696_345964_63_1022 319
96 3300042612 Ga0466705_518563 Ga0466705_518563_1041_2000 319
97 3300042615 Ga0466711_047431 Ga0466711_047431_198_1157 319
98 3300042652 Ga0466708_256221 Ga0466708_256221_38203_39162 319
99 3300002462 JGI24702J35022_10000901 JGI24702J35022_100009012 320
100 3300042591 Ga0466692_105814 Ga0466692_105814_3559_4521 320
101 3300042655 Ga0466727_103085 Ga0466727_103085_403_1365 320
102 3300042597 Ga0466699_037358 Ga0466699_037358_5430_6395 321
103 3300042600 Ga0466700_378297 Ga0466700_378297_37_1002 321
104 3300042606 Ga0466719_181498 Ga0466719_181498_132_1097 321
105 3300042616 Ga0466715_027504 Ga0466715_027504_707_1672 321
106 3300042616 Ga0466715_228342 Ga0466715_228342_916_1881 321
107 3300042648 Ga0466709_242276 Ga0466709_242276_2598_3566 322
108 3300000089 AustNasuHG_c1001125 AustNasuHG_10011256 323
109 3300010167 Ga0123353_10059307 Ga0123353_100593073 323
110 3300042591 Ga0466692_007953 Ga0466692_007953_7524_8495 323
111 3300042597 Ga0466699_203574 Ga0466699_203574_6281_7252 323
112 3300042618 Ga0466723_011647 Ga0466723_011647_1697_2668 323
113 3300042648 Ga0466709_046436 Ga0466709_046436_16677_17648 323
114 3300024493 Ga0264413_124295 Ga0264413_1242953 324
115 3300042607 Ga0466720_029531 Ga0466720_029531_1147_2121 324
116 3300042607 Ga0466720_114818 Ga0466720_114818_1657_2631 324
117 3300042607 Ga0466720_122115 Ga0466720_122115_2698_3672 324
118 3300042656 Ga0466732_107841 Ga0466732_107841_1308_2282 324
119 3300042656 Ga0466732_232683 Ga0466732_232683_1067_2041 324
120 3300024493 Ga0264413_115063 Ga0264413_1150632 325
121 3300042600 Ga0466700_442406 Ga0466700_442406_1010_1987 325
122 3300042607 Ga0466720_033079 Ga0466720_033079_3391_4368 325
123 3300042620 Ga0466728_457778 Ga0466728_457778_1893_2870 325
124 3300042636 Ga0466703_365670 Ga0466703_365670_4772_5749 325
125 3300005485 Ga0074263_101355 Ga0074263_1013552 326
126 3300042607 Ga0466720_033882 Ga0466720_033882_784_1764 326
127 3300042607 Ga0466720_107943 Ga0466720_107943_5867_6847 326
128 3300042616 Ga0466715_222045 Ga0466715_222045_10389_11369 326
129 3300042616 Ga0466715_598120 Ga0466715_598120_1708_2721 326
130 3300042620 Ga0466728_402767 Ga0466728_402767_116_1096 326
131 3300042648 Ga0466709_052570 Ga0466709_052570_425_1405 326
132 3300042655 Ga0466727_179235 Ga0466727_179235_156_1136 326
133 3300042596 Ga0466696_468967 Ga0466696_468967_547_1530 327
134 3300042609 Ga0466722_224275 Ga0466722_224275_12671_13654 327
135 3300042612 Ga0466705_528511 Ga0466705_528511_675_1658 327
136 3300042615 Ga0466711_037493 Ga0466711_037493_13468_14451 327
137 3300042615 Ga0466711_220603 Ga0466711_220603_1983_2966 327
138 3300042643 Ga0466704_503754 Ga0466704_503754_28_1011 327
139 3300042643 Ga0466704_558037 Ga0466704_558037_12355_13338 327
140 3300042648 Ga0466709_145655 Ga0466709_145655_4341_5324 327
141 3300010167 Ga0123353_10253566 Ga0123353_102535662 328
142 3300042601 Ga0466707_238136 Ga0466707_238136_63_1052 329
143 3300042596 Ga0466696_361474 Ga0466696_361474_16156_17148 330
144 3300042590 Ga0466690_119517 Ga0466690_119517_5835_6893 331
145 3300042620 Ga0466728_403211 Ga0466728_403211_108_1103 331
146 3300042643 Ga0466704_504366 Ga0466704_504366_2639_3637 332
147 3300042618 Ga0466723_145089 Ga0466723_145089_2781_3782 333
148 3300042619 Ga0466726_235532 Ga0466726_235532_1841_2842 333
149 3300042618 Ga0466723_156541 Ga0466723_156541_932_1954 340
150 3300010882 Ga0123354_10198337 Ga0123354_101983372 357

🧩 MSA Aligner

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🔬 Functional Annotation

PFAM IDNameDescriptionStartEndAccuracy
PF03193 RsgA_GTPase RsgA GTPase 96 279 0.96
PF00009 GTP_EFTU Elongation factor Tu GTP binding domain 138 205 0.83
PF01926 MMR_HSR1 50S ribosome-binding GTPase 210 275 0.72

🌐 Gene Ontology Annotation

PFAMGO TermDescriptionCategory
PF01926 GO:0005525 GTP binding MF

🏗️ Structural Annotation – Top 5 Hits

IDDescriptionScoreStartEnd
5no4-assembly1.cif.gz_Z RsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate with uS3) 0.847 34 346
6h4d-assembly1.cif.gz_A Crystal structure of RsgA from Pseudomonas aeruginosa 0.839 34 341
5uz4-assembly1.cif.gz_Z The cryo-EM structure of YjeQ bound to the 30S subunit suggests a fidelity checkpoint function for this protein in ribosome assembly 0.836 35 343
2rcn-assembly1.cif.gz_A Crystal Structure of the Ribosomal interacting GTPase YjeQ from the Enterobacterial species Salmonella Typhimurium. 0.831 34 341
2ykr-assembly1.cif.gz_W 30S ribosomal subunit with RsgA bound in the presence of GMPPNP 0.83 34 341
IDDescriptionScoreStartEndSuperfamily
af_Q55D16_339_392_2.30.30.140 Mainly Beta;Roll;SH3 type barrels.; 0.942 38 62 2.30.30.140
af_Q58FY4_313_366_2.30.30.140 Mainly Beta;Roll;SH3 type barrels.; 0.9238 38 62 2.30.30.140
af_Q9VUH8_728_786_2.30.30.140 Mainly Beta;Roll;SH3 type barrels.; 0.8825 38 62 2.30.30.140
1u0lC02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.877 117 273 3.40.50.300
af_P39286_103_275_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8518 97 279 3.40.50.300
IDDescriptionScoreStartEndGO Terms
AF-A0A7Y5S1H1-F1-model_v4 Uncharacterized/unreviewed 0.9341 95 346
AF-H9UJL6-F1-model_v4 Small ribosomal subunit biogenesis GTPase RsgA 0.9174 37 343 GO:0005737
GO:0005525
GO:0003924
GO:0046872
GO:0019843
GO:0042274
AF-A0A7Y3NHQ8-F1-model_v4 Uncharacterized/unreviewed 0.9112 37 216

⚛️ Structure & Feature Viewer

pLDDTpTMQuality
0.82 0.9 High

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🗺️ Geographic Distribution

Some samples may be missing due to lack of coordinate data.